RNA–Protein interactions for RNA: ENST00000549022.5

PFKM-215, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-215	ENST00000549022	SSC5D	A1L4H1	1573 aa		13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	RNF113A	O15541	343 aa	Known RBP	13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	PDE4A	P27815	886 aa		13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	DCAF15	Q66K64	600 aa		13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	TICAM2	Q86XR7	235 aa		13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	CD99L2	Q8TCZ2	262 aa		13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	RIOK1	Q9BRS2	568 aa	Known RBP	13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	DDX4	Q9NQI0	724 aa	Known RBP	13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	COLQ	Q9Y215	455 aa	Predicted RBP	13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	COL2A1	P02458	1487 aa	Predicted RBP	13.67	□□□□□ -0.22
PFKM-215	ENST00000549022	USP5	P45974	858 aa		13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	IREB2	P48200	963 aa	Known RBP	13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	SP3	Q02447	781 aa		13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	CRHR2	Q13324	411 aa		13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	ARHGEF6	Q15052	776 aa		13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	CDAN1	Q8IWY9	1227 aa		13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	ZFPM1	Q8IX07	1006 aa		13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	TGFBRAP1	Q8WUH2	860 aa		13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	APPBP2	Q92624	585 aa		13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	ZNF333	Q96JL9	665 aa		13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	DHX36	Q9H2U1	1008 aa	Known RBP	13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	ATRNL1	Q5VV63	1379 aa		13.66	□□□□□ -0.22
PFKM-215	ENST00000549022	FLT1	P17948	1338 aa		13.65	□□□□□ -0.22
PFKM-215	ENST00000549022	MYH7	P12883	1935 aa		13.65	□□□□□ -0.22
PFKM-215	ENST00000549022	TRIM6-TRIM34	B2RNG4	842 aa		13.65	□□□□□ -0.22
PFKM-215	ENST00000549022	NBPF11	Q86T75	865 aa		13.65	□□□□□ -0.22
PFKM-215	ENST00000549022	MAPKAPK5	Q8IW41	473 aa		13.65	□□□□□ -0.22
PFKM-215	ENST00000549022	PPP4R2	Q9NY27	417 aa		13.65	□□□□□ -0.22
PFKM-215	ENST00000549022	SZT2	Q5T011	3432 aa		13.65	□□□□□ -0.22
PFKM-215	ENST00000549022	TRIOBP	Q9H2D6	2365 aa		13.65	□□□□□ -0.22
PFKM-215	ENST00000549022	CEP290	O15078	2479 aa		13.65	□□□□□ -0.22
PFKM-215	ENST00000549022	TESPA1	A2RU30	521 aa	Predicted RBP	13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	DDTL	A6NHG4	134 aa	Predicted RBP	13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	USP2	O75604	605 aa	Predicted RBP	13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	MBD4	O95243	580 aa		13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	SLFNL1	Q499Z3	407 aa		13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	SH3BP5L	Q7L8J4	393 aa		13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	LCORL	Q8N3X6	602 aa		13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	RILPL2	Q969X0	211 aa		13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	CLMN	Q96JQ2	1002 aa		13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	ZNF341	Q9BYN7	854 aa		13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	ARMT1	Q9H993	441 aa		13.64	□□□□□ -0.23
PFKM-215	ENST00000549022	CHGB	P05060	677 aa		13.63	□□□□□ -0.23
PFKM-215	ENST00000549022	SLC9C1	Q4G0N8	1177 aa		13.63	□□□□□ -0.23
PFKM-215	ENST00000549022	TTC22	Q5TAA0	569 aa		13.63	□□□□□ -0.23
PFKM-215	ENST00000549022	ANKRD13A	Q8IZ07	590 aa		13.63	□□□□□ -0.23
PFKM-215	ENST00000549022	OSBP2	Q969R2	916 aa		13.63	□□□□□ -0.23
PFKM-215	ENST00000549022	DDRGK1	Q96HY6	314 aa		13.63	□□□□□ -0.23
PFKM-215	ENST00000549022	PUS7L	Q9H0K6	701 aa	Known RBP	13.63	□□□□□ -0.23
PFKM-215	ENST00000549022	ATP8A2	Q9NTI2	1148 aa		13.63	□□□□□ -0.23
PFKM-215	ENST00000549022	PI4KB	Q9UBF8	816 aa		13.63	□□□□□ -0.23
PFKM-215	ENST00000549022	FZD1	Q9UP38	647 aa		13.63	□□□□□ -0.23
PFKM-215	ENST00000549022	FOCAD	Q5VW36	1801 aa		13.62	□□□□□ -0.23
PFKM-215	ENST00000549022	TBC1D12	O60347	775 aa		13.62	□□□□□ -0.23
PFKM-215	ENST00000549022	HLA-DOA	P06340	250 aa		13.62	□□□□□ -0.23
PFKM-215	ENST00000549022	GNAT2	P19087	354 aa		13.62	□□□□□ -0.23
PFKM-215	ENST00000549022	ZMYM1	Q5SVZ6	1142 aa		13.62	□□□□□ -0.23
PFKM-215	ENST00000549022	MIGA2	Q7L4E1	593 aa		13.62	□□□□□ -0.23
PFKM-215	ENST00000549022	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
PFKM-215	ENST00000549022	HIP1	O00291	1037 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	GPAA1	O43292	621 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	MAP3K9	P80192	1104 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	MAP3K10	Q02779	954 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	SLC4A8	Q2Y0W8	1093 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	TTC6	Q86TZ1	520 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	SDR42E1	Q8WUS8	393 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	OTUD5	Q96G74	571 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	WRNIP1	Q96S55	665 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	STRBP	Q96SI9	672 aa	Known RBP	13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	SAP30BP	Q9UHR5	308 aa	Known RBP	13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	HERC5	Q9UII4	1024 aa	Known RBP	13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	PALD1	Q9ULE6	856 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	CSAD	Q9Y600	493 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	SLC4A4	Q9Y6R1	1079 aa		13.61	□□□□□ -0.23
PFKM-215	ENST00000549022	AK9	Q5TCS8	1911 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022		H0YGN5	161 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	GSPT1	P15170	499 aa	Known RBP	13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	SDS	P20132	328 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	GJA5	P36382	358 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	AMOTL1	Q8IY63	956 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	CDK5RAP2	Q96SN8	1893 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	PTPN18	Q99952	460 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	TRIM34	Q9BYJ4	488 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	HELLS	Q9NRZ9	838 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	MCM9	Q9NXL9	1143 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	ZNF112	Q9UJU3	913 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022	PTCH2	Q9Y6C5	1203 aa		13.6	□□□□□ -0.23
PFKM-215	ENST00000549022		M0R2C6	588 aa		13.59	□□□□□ -0.23
PFKM-215	ENST00000549022	PRKAB2	O43741	272 aa		13.59	□□□□□ -0.23
PFKM-215	ENST00000549022	POLR3D	P05423	398 aa	Predicted RBP	13.59	□□□□□ -0.23
PFKM-215	ENST00000549022	CAP1	Q01518	475 aa		13.59	□□□□□ -0.23
PFKM-215	ENST00000549022	VGLL4	Q14135	290 aa		13.59	□□□□□ -0.23
PFKM-215	ENST00000549022	GIMAP6	Q6P9H5	292 aa		13.59	□□□□□ -0.23

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