RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 NAA16Q6N069 864 aaPredicted RBP21.34■■□□□ 1.01
CHMP1A-205ENST00000548650 NBPF11Q86T75 865 aa21.34■■□□□ 1.01
CHMP1A-205ENST00000548650 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.34■■□□□ 1.01
CHMP1A-205ENST00000548650 SLC45A1Q9Y2W3 748 aa21.34■■□□□ 1.01
CHMP1A-205ENST00000548650 TRIM75PA6NK02 468 aa21.33■■□□□ 1.01
CHMP1A-205ENST00000548650 OSBPP22059 807 aa21.33■■□□□ 1.01
CHMP1A-205ENST00000548650 GADL1Q6ZQY3 521 aa21.33■■□□□ 1.01
CHMP1A-205ENST00000548650 PANK1Q8TE04 598 aa21.33■■□□□ 1.01
CHMP1A-205ENST00000548650 PIH1D3Q9NQM4 214 aaKnown RBP21.33■■□□□ 1.01
CHMP1A-205ENST00000548650 AATFQ9NY61 560 aaKnown RBP eCLIP21.33■■□□□ 1.01
CHMP1A-205ENST00000548650 SRRDQ9UH36 339 aa21.33■■□□□ 1.01
CHMP1A-205ENST00000548650 DDX60LQ5H9U9 1706 aaKnown RBP21.32■■□□□ 1
CHMP1A-205ENST00000548650 ZAP70P43403 619 aa21.32■■□□□ 1
CHMP1A-205ENST00000548650 RRP1BQ14684 758 aaKnown RBP21.32■■□□□ 1
CHMP1A-205ENST00000548650 EAF2Q96CJ1 260 aaPredicted RBP21.32■■□□□ 1
CHMP1A-205ENST00000548650 NOL10Q9BSC4 688 aaKnown RBP21.32■■□□□ 1
CHMP1A-205ENST00000548650 TMEM106CQ9BVX2 250 aa21.32■■□□□ 1
CHMP1A-205ENST00000548650 FLT1P17948 1338 aa21.31■■□□□ 1
CHMP1A-205ENST00000548650 MYH1P12882 1939 aa21.31■■□□□ 1
CHMP1A-205ENST00000548650 PPP4CP60510 307 aa21.31■■□□□ 1
CHMP1A-205ENST00000548650 CCDC8Q9H0W5 538 aaPredicted RBP21.31■■□□□ 1
CHMP1A-205ENST00000548650 HERC5Q9UII4 1024 aaKnown RBP21.31■■□□□ 1
CHMP1A-205ENST00000548650 AGTPBP1Q9UPW5 1226 aa21.31■■□□□ 1
CHMP1A-205ENST00000548650 MYPNQ86TC9 1320 aa21.3■■□□□ 1
CHMP1A-205ENST00000548650 IGSF3O75054 1194 aa21.3■■□□□ 1
CHMP1A-205ENST00000548650 FMNL1O95466 1100 aaPredicted RBP21.3■■□□□ 1
CHMP1A-205ENST00000548650 BAG3O95817 575 aa21.3■■□□□ 1
CHMP1A-205ENST00000548650 MYCP01106 439 aaPredicted RBP21.3■■□□□ 1
CHMP1A-205ENST00000548650 PLCG2P16885 1265 aa21.3■■□□□ 1
CHMP1A-205ENST00000548650 EXOC6BQ9Y2D4 811 aa21.3■■□□□ 1
CHMP1A-205ENST00000548650 CAP2P40123 477 aa21.29■■□□□ 1
CHMP1A-205ENST00000548650 FCGRTP55899 365 aa21.29■■□□□ 1
CHMP1A-205ENST00000548650 PRKCZQ05513 592 aa21.29■■□□□ 1
CHMP1A-205ENST00000548650 SLC4A8Q2Y0W8 1093 aa21.29■■□□□ 1
CHMP1A-205ENST00000548650 TREML2Q5T2D2 321 aa21.29■■□□□ 1
CHMP1A-205ENST00000548650 DNAJC18Q9H819 358 aa21.29■■□□□ 1
CHMP1A-205ENST00000548650 MAPKAPK5Q8IW41 473 aa21.28■■□□□ 1
CHMP1A-205ENST00000548650 PROCA1Q8NCQ7 364 aaPredicted RBP21.28■■□□□ 1
CHMP1A-205ENST00000548650 ZNF280CQ8ND82 737 aa21.28■■□□□ 1
CHMP1A-205ENST00000548650 DHX36Q9H2U1 1008 aaKnown RBP21.28■■□□□ 1
CHMP1A-205ENST00000548650 PI4KBQ9UBF8 816 aa21.28■■□□□ 1
CHMP1A-205ENST00000548650 NAV1Q8NEY1 1877 aa21.28■■□□□ 1
CHMP1A-205ENST00000548650 DOCK3Q8IZD9 2030 aa21.28■■□□□ 1
CHMP1A-205ENST00000548650 HOXD10P28358 340 aa21.27■■□□□ 1
CHMP1A-205ENST00000548650 RAET1EQ8TD07 263 aa21.27■■□□□ 1
CHMP1A-205ENST00000548650 SMCR8Q8TEV9 937 aaPredicted RBP21.27■■□□□ 1
CHMP1A-205ENST00000548650 TGFBRAP1Q8WUH2 860 aa21.27■■□□□ 1
CHMP1A-205ENST00000548650 TBC1D2Q9BYX2 928 aa21.27■■□□□ 1
CHMP1A-205ENST00000548650 NDUFB9Q9Y6M9 179 aa21.27■■□□□ 1
CHMP1A-205ENST00000548650 GRK4P32298 578 aa21.26■□□□□ 0.99
CHMP1A-205ENST00000548650 SPP2Q13103 211 aa21.26■□□□□ 0.99
CHMP1A-205ENST00000548650 MTFR1Q15390 333 aa21.26■□□□□ 0.99
CHMP1A-205ENST00000548650 METTL16Q86W50 562 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-205ENST00000548650 ERC1Q8IUD2 1116 aa21.26■□□□□ 0.99
CHMP1A-205ENST00000548650 SHISA4Q96DD7 197 aa21.26■□□□□ 0.99
CHMP1A-205ENST00000548650 IDH1O75874 414 aaKnown RBP21.25■□□□□ 0.99
CHMP1A-205ENST00000548650 CYP7A1P22680 504 aa21.25■□□□□ 0.99
CHMP1A-205ENST00000548650 HMGCS2P54868 508 aa21.25■□□□□ 0.99
CHMP1A-205ENST00000548650 DYNLL1P63167 89 aaKnown RBP21.25■□□□□ 0.99
CHMP1A-205ENST00000548650 AACSQ86V21 672 aa21.25■□□□□ 0.99
CHMP1A-205ENST00000548650 PNMA3Q9UL41 463 aa21.25■□□□□ 0.99
CHMP1A-205ENST00000548650 GABRQQ9UN88 632 aa21.25■□□□□ 0.99
CHMP1A-205ENST00000548650 USP17L5A8MUK1 530 aa21.24■□□□□ 0.99
CHMP1A-205ENST00000548650 JAG1P78504 1218 aa21.24■□□□□ 0.99
CHMP1A-205ENST00000548650 ANTXR1Q9H6X2 564 aa21.24■□□□□ 0.99
CHMP1A-205ENST00000548650 PALD1Q9ULE6 856 aa21.24■□□□□ 0.99
CHMP1A-205ENST00000548650 FAM110CQ1W6H9 321 aa21.23■□□□□ 0.99
CHMP1A-205ENST00000548650 SHROOM1Q2M3G4 852 aaPredicted RBP21.23■□□□□ 0.99
CHMP1A-205ENST00000548650 SH3D19Q5HYK7 790 aa21.23■□□□□ 0.99
CHMP1A-205ENST00000548650 MIGA1Q8NAN2 632 aa21.23■□□□□ 0.99
CHMP1A-205ENST00000548650 AS3MTQ9HBK9 375 aa21.23■□□□□ 0.99
CHMP1A-205ENST00000548650 CEP290O15078 2479 aa21.23■□□□□ 0.99
CHMP1A-205ENST00000548650 TNPO2O14787 897 aaKnown RBP21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 ASNSP08243 561 aa21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 MS4A1P11836 297 aa21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 ANKRD13CQ8N6S4 541 aa21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 MAGEB6Q8N7X4 407 aa21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 SLAIN1Q8ND83 568 aa21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 RHPN1Q8TCX5 695 aa21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 WDR18Q9BV38 432 aa21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 IL1RAPL2Q9NP60 686 aa21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 SAP30BPQ9UHR5 308 aaKnown RBP21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 PLXNB2O15031 1838 aa21.22■□□□□ 0.99
CHMP1A-205ENST00000548650 GDF11O95390 407 aa21.21■□□□□ 0.99
CHMP1A-205ENST00000548650 FLT3LGP49771 235 aa21.21■□□□□ 0.99
CHMP1A-205ENST00000548650 MTMR2Q13614 643 aa21.21■□□□□ 0.99
CHMP1A-205ENST00000548650 HSP90AB4PQ58FF6 505 aa21.21■□□□□ 0.99
CHMP1A-205ENST00000548650 FOXP4Q8IVH2 680 aaPredicted RBP21.21■□□□□ 0.99
CHMP1A-205ENST00000548650 CRACR2BQ8N4Y2 399 aaPredicted RBP21.21■□□□□ 0.99
CHMP1A-205ENST00000548650 ZBTB21Q9ULJ3 1066 aa21.21■□□□□ 0.99
CHMP1A-205ENST00000548650 HLA-DOAP06340 250 aa21.2■□□□□ 0.98
CHMP1A-205ENST00000548650 CCL5P13501 91 aa21.2■□□□□ 0.98
CHMP1A-205ENST00000548650 PABPC4Q13310 644 aaKnown RBP eCLIP21.2■□□□□ 0.98
CHMP1A-205ENST00000548650 TMED8Q6PL24 325 aaPredicted RBP21.2■□□□□ 0.98
CHMP1A-205ENST00000548650 CERS3Q8IU89 383 aa21.2■□□□□ 0.98
CHMP1A-205ENST00000548650 SIRT2Q8IXJ6 389 aa21.2■□□□□ 0.98
CHMP1A-205ENST00000548650 TRIM34Q9BYJ4 488 aa21.2■□□□□ 0.98
CHMP1A-205ENST00000548650 ASCC2Q9H1I8 757 aaPredicted RBP21.2■□□□□ 0.98
CHMP1A-205ENST00000548650 DDX19BQ9UMR2 479 aa21.2■□□□□ 0.98
CHMP1A-205ENST00000548650 COG6Q9Y2V7 657 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms