RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 COL9A1P20849 921 aa6.05□□□□□ -1.44
APP-217ENST00000548570 BTDP43251 543 aa6.05□□□□□ -1.44
APP-217ENST00000548570 CACNB3P54284 484 aa6.05□□□□□ -1.44
APP-217ENST00000548570 MAP3K12Q12852 859 aa6.05□□□□□ -1.44
APP-217ENST00000548570 TTF1Q15361 905 aaPredicted RBP6.05□□□□□ -1.44
APP-217ENST00000548570 TBC1D10BQ4KMP7 808 aaPredicted RBP6.05□□□□□ -1.44
APP-217ENST00000548570 RBM26Q5T8P6 1007 aaKnown RBP6.05□□□□□ -1.44
APP-217ENST00000548570 VPS53Q5VIR6 699 aa6.05□□□□□ -1.44
APP-217ENST00000548570 NAA16Q6N069 864 aaPredicted RBP6.05□□□□□ -1.44
APP-217ENST00000548570 CDC42EP5Q6NZY7 148 aa6.05□□□□□ -1.44
APP-217ENST00000548570 TRAF7Q6Q0C0 670 aa6.05□□□□□ -1.44
APP-217ENST00000548570 SH3BP5LQ7L8J4 393 aa6.05□□□□□ -1.44
APP-217ENST00000548570 CNTROBQ8N137 903 aa6.05□□□□□ -1.44
APP-217ENST00000548570 ZGPATQ8N5A5 531 aaKnown RBP6.05□□□□□ -1.44
APP-217ENST00000548570 NKX2-3Q8TAU0 364 aa6.05□□□□□ -1.44
APP-217ENST00000548570 SH3RF3Q8TEJ3 882 aaPredicted RBP6.05□□□□□ -1.44
APP-217ENST00000548570 APPBP2Q92624 585 aa6.05□□□□□ -1.44
APP-217ENST00000548570 STRBPQ96SI9 672 aaKnown RBP6.05□□□□□ -1.44
APP-217ENST00000548570 TAF1DQ9H5J8 278 aaPredicted RBP6.05□□□□□ -1.44
APP-217ENST00000548570 ARMT1Q9H993 441 aa6.05□□□□□ -1.44
APP-217ENST00000548570 RRAGCQ9HB90 399 aa6.05□□□□□ -1.44
APP-217ENST00000548570 MYOZ2Q9NPC6 264 aa6.05□□□□□ -1.44
APP-217ENST00000548570 AATFQ9NY61 560 aaKnown RBP eCLIP6.05□□□□□ -1.44
APP-217ENST00000548570 FAM198AQ9UFP1 575 aa6.05□□□□□ -1.44
APP-217ENST00000548570 TACC3Q9Y6A5 838 aa6.05□□□□□ -1.44
APP-217ENST00000548570 CNTNAP1P78357 1384 aa6.05□□□□□ -1.44
APP-217ENST00000548570 RPAP1Q9BWH6 1393 aaPredicted RBP6.05□□□□□ -1.44
APP-217ENST00000548570 CLRN2A0PK11 232 aa6.04□□□□□ -1.44
APP-217ENST00000548570 GSG1L2A8MUP6 293 aa6.04□□□□□ -1.44
APP-217ENST00000548570 SGSM2O43147 1006 aa6.04□□□□□ -1.44
APP-217ENST00000548570 IGSF3O75054 1194 aa6.04□□□□□ -1.44
APP-217ENST00000548570 MBD4O95243 580 aa6.04□□□□□ -1.44
APP-217ENST00000548570 PTH1RQ03431 593 aa6.04□□□□□ -1.44
APP-217ENST00000548570 FMR1Q06787 632 aaKnown RBP eCLIP6.04□□□□□ -1.44
APP-217ENST00000548570 COL9A3Q14050 684 aaPredicted RBP6.04□□□□□ -1.44
APP-217ENST00000548570 KIF4BQ2VIQ3 1234 aa6.04□□□□□ -1.44
APP-217ENST00000548570 SPTY2D1Q68D10 685 aaPredicted RBP6.04□□□□□ -1.44
APP-217ENST00000548570 CWC27Q6UX04 472 aaKnown RBP6.04□□□□□ -1.44
APP-217ENST00000548570 DZIP1Q86YF9 867 aaKnown RBP6.04□□□□□ -1.44
APP-217ENST00000548570 ZNF526Q8TF50 670 aaPredicted RBP6.04□□□□□ -1.44
APP-217ENST00000548570 TEKT1Q969V4 418 aa6.04□□□□□ -1.44
APP-217ENST00000548570 TDRD3Q9H7E2 651 aaKnown RBP6.04□□□□□ -1.44
APP-217ENST00000548570 EPB41L4AQ9HCS5 686 aaPredicted RBP6.04□□□□□ -1.44
APP-217ENST00000548570 ADARB2Q9NS39 739 aaKnown RBP6.04□□□□□ -1.44
APP-217ENST00000548570 ZNF70Q9UC06 446 aaPredicted RBP6.04□□□□□ -1.44
APP-217ENST00000548570 HPS5Q9UPZ3 1129 aa6.04□□□□□ -1.44
APP-217ENST00000548570 TAF6LQ9Y6J9 622 aa6.04□□□□□ -1.44
APP-217ENST00000548570 GPAA1O43292 621 aa6.03□□□□□ -1.44
APP-217ENST00000548570 CDC45O75419 566 aa6.03□□□□□ -1.44
APP-217ENST00000548570 ZFYP08048 801 aaPredicted RBP6.03□□□□□ -1.44
APP-217ENST00000548570 CYP2D6P10635 497 aa6.03□□□□□ -1.44
APP-217ENST00000548570 EPHX2P34913 555 aa6.03□□□□□ -1.44
APP-217ENST00000548570 MFSD10Q14728 455 aa6.03□□□□□ -1.44
APP-217ENST00000548570 DLGAP5Q15398 846 aa6.03□□□□□ -1.44
APP-217ENST00000548570 MCMDC2Q4G0Z9 681 aa6.03□□□□□ -1.44
APP-217ENST00000548570 ANGEL2Q5VTE6 544 aaKnown RBP6.03□□□□□ -1.44
APP-217ENST00000548570 PAXIP1Q6ZW49 1069 aaPredicted RBP6.03□□□□□ -1.44
APP-217ENST00000548570 PACS2Q86VP3 889 aa6.03□□□□□ -1.44
APP-217ENST00000548570 TICAM2Q86XR7 235 aa6.03□□□□□ -1.44
APP-217ENST00000548570 SDR42E1Q8WUS8 393 aa6.03□□□□□ -1.44
APP-217ENST00000548570 TEPSINQ96N21 525 aa6.03□□□□□ -1.44
APP-217ENST00000548570 ESYT1Q9BSJ8 1104 aa6.03□□□□□ -1.44
APP-217ENST00000548570 IDI2Q9BXS1 227 aa6.03□□□□□ -1.44
APP-217ENST00000548570 LSG1Q9H089 658 aaKnown RBP6.03□□□□□ -1.44
APP-217ENST00000548570 DCP1AQ9NPI6 582 aaPredicted RBP6.03□□□□□ -1.44
APP-217ENST00000548570 HELLSQ9NRZ9 838 aa6.03□□□□□ -1.44
APP-217ENST00000548570 USP40Q9NVE5 1235 aa6.03□□□□□ -1.44
APP-217ENST00000548570 SEPT9Q9UHD8 586 aaPredicted RBP6.03□□□□□ -1.44
APP-217ENST00000548570 HACL1Q9UJ83 578 aa6.03□□□□□ -1.44
APP-217ENST00000548570 CHD4Q14839 1912 aa6.03□□□□□ -1.44
APP-217ENST00000548570 ATRNL1Q5VV63 1379 aa6.03□□□□□ -1.44
APP-217ENST00000548570 AKAP11Q9UKA4 1901 aa6.03□□□□□ -1.44
APP-217ENST00000548570 TIAM2Q8IVF5 1701 aa6.02□□□□□ -1.45
APP-217ENST00000548570 CYP2D7A0A087X1C5 515 aa6.02□□□□□ -1.45
APP-217ENST00000548570 MAGEB6P1A0A0J9YX57 407 aa6.02□□□□□ -1.45
APP-217ENST00000548570 DDTLA6NHG4 134 aaPredicted RBP6.02□□□□□ -1.45
APP-217ENST00000548570 ADM5C9JUS6 153 aa6.02□□□□□ -1.45
APP-217ENST00000548570 LDHCP07864 332 aa6.02□□□□□ -1.45
APP-217ENST00000548570 HSPD1P10809 573 aaKnown RBP6.02□□□□□ -1.45
APP-217ENST00000548570 MMP14P50281 582 aa6.02□□□□□ -1.45
APP-217ENST00000548570 RBM5P52756 815 aaKnown RBP eCLIP6.02□□□□□ -1.45
APP-217ENST00000548570 GSTO1P78417 241 aa6.02□□□□□ -1.45
APP-217ENST00000548570 RRP1BQ14684 758 aaKnown RBP6.02□□□□□ -1.45
APP-217ENST00000548570 C6orf132Q5T0Z8 1188 aa6.02□□□□□ -1.45
APP-217ENST00000548570 PRAMEF18Q5VWM3 479 aa6.02□□□□□ -1.45
APP-217ENST00000548570 TMED8Q6PL24 325 aaPredicted RBP6.02□□□□□ -1.45
APP-217ENST00000548570 USP50Q70EL3 339 aaPredicted RBP6.02□□□□□ -1.45
APP-217ENST00000548570 OGFOD1Q8N543 542 aa6.02□□□□□ -1.45
APP-217ENST00000548570 ZNF784Q8NCA9 323 aaPredicted RBP6.02□□□□□ -1.45
APP-217ENST00000548570 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.02□□□□□ -1.45
APP-217ENST00000548570 DNAJC18Q9H819 358 aa6.02□□□□□ -1.45
APP-217ENST00000548570 GGA3Q9NZ52 723 aa6.02□□□□□ -1.45
APP-217ENST00000548570 WDR90Q96KV7 1748 aa6.02□□□□□ -1.45
APP-217ENST00000548570 SSC5DA1L4H1 1573 aa6.01□□□□□ -1.45
APP-217ENST00000548570 FLT1P17948 1338 aa6.01□□□□□ -1.45
APP-217ENST00000548570 CCDC171Q6TFL3 1326 aa6.01□□□□□ -1.45
APP-217ENST00000548570 ADAMTSL1Q8N6G6 1762 aa6.01□□□□□ -1.45
APP-217ENST00000548570 IQCA1LA6NCM1 817 aa6.01□□□□□ -1.45
APP-217ENST00000548570 TCP10L2B9ZVM9 353 aa6.01□□□□□ -1.45
APP-217ENST00000548570 H7C1D1 291 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms