RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 GRK4P32298 578 aa18.74■□□□□ 0.59
SNX29P1-201ENST00000548357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNX29P1-201ENST00000548357 SZT2Q5T011 3432 aa18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 TBC1D12O60347 775 aa18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 CYP2E1P05181 493 aaPredicted RBP18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 PRMT2P55345 433 aa18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 ATP8B2P98198 1209 aa18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 HNRNPUQ00839 825 aaKnown RBP eCLIP18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 HABP4Q5JVS0 413 aaKnown RBP18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 TEX11Q8IYF3 940 aa18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 RAET1EQ8TD07 263 aa18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 DNAJC18Q9H819 358 aa18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 PIH1D3Q9NQM4 214 aaKnown RBP18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 AATFQ9NY61 560 aaKnown RBP eCLIP18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 NDUFB9Q9Y6M9 179 aa18.73■□□□□ 0.59
SNX29P1-201ENST00000548357 CCL5P13501 91 aa18.72■□□□□ 0.59
SNX29P1-201ENST00000548357 FCGRTP55899 365 aa18.72■□□□□ 0.59
SNX29P1-201ENST00000548357 FASTKD5Q7L8L6 764 aaKnown RBP18.72■□□□□ 0.59
SNX29P1-201ENST00000548357 LRP2BPQ9P2M1 347 aa18.72■□□□□ 0.59
SNX29P1-201ENST00000548357 DBNLQ9UJU6 430 aaKnown RBP18.72■□□□□ 0.59
SNX29P1-201ENST00000548357 AGTPBP1Q9UPW5 1226 aa18.72■□□□□ 0.59
SNX29P1-201ENST00000548357 MYH8P13535 1937 aa18.71■□□□□ 0.59
SNX29P1-201ENST00000548357 LDHCP07864 332 aa18.71■□□□□ 0.59
SNX29P1-201ENST00000548357 UQCRFS1P1P0C7P4 283 aa18.71■□□□□ 0.59
SNX29P1-201ENST00000548357 ELNP15502 786 aa18.71■□□□□ 0.59
SNX29P1-201ENST00000548357 ZAP70P43403 619 aa18.71■□□□□ 0.59
SNX29P1-201ENST00000548357 GSTO1P78417 241 aa18.71■□□□□ 0.59
SNX29P1-201ENST00000548357 SPP2Q13103 211 aa18.71■□□□□ 0.59
SNX29P1-201ENST00000548357 TTC39AQ5SRH9 613 aa18.71■□□□□ 0.59
SNX29P1-201ENST00000548357 UNC93B1Q9H1C4 597 aa18.71■□□□□ 0.59
SNX29P1-201ENST00000548357 GPR108Q9NPR9 543 aa18.71■□□□□ 0.59
SNX29P1-201ENST00000548357 ZBTB7BO15156 539 aaPredicted RBP18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 PEX10O60683 326 aa18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 SURF6O75683 361 aaKnown RBP18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 CAP2P40123 477 aa18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 HMGCS2P54868 508 aa18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 DYNLL1P63167 89 aaKnown RBP18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 NAA16Q6N069 864 aaPredicted RBP18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 MAPKAPK5Q8IW41 473 aa18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 ITPRIPQ8IWB1 547 aa18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 ANKRD13CQ8N6S4 541 aa18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 CCDC8Q9H0W5 538 aaPredicted RBP18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 SLC45A1Q9Y2W3 748 aa18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 FRMPD3Q5JV73 1810 aa18.7■□□□□ 0.58
SNX29P1-201ENST00000548357 MYH7P12883 1935 aa18.69■□□□□ 0.58
SNX29P1-201ENST00000548357 HOXD10P28358 340 aa18.69■□□□□ 0.58
SNX29P1-201ENST00000548357 FLT3LGP49771 235 aa18.69■□□□□ 0.58
SNX29P1-201ENST00000548357 OS9Q13438 667 aaPredicted RBP18.69■□□□□ 0.58
SNX29P1-201ENST00000548357 UBE2Q1Q7Z7E8 422 aa18.69■□□□□ 0.58
SNX29P1-201ENST00000548357 TGFBRAP1Q8WUH2 860 aa18.69■□□□□ 0.58
SNX29P1-201ENST00000548357 EAF2Q96CJ1 260 aaPredicted RBP18.69■□□□□ 0.58
SNX29P1-201ENST00000548357 FLT1P17948 1338 aa18.69■□□□□ 0.58
SNX29P1-201ENST00000548357 BAZ2AQ9UIF9 1905 aaKnown RBP18.68■□□□□ 0.58
SNX29P1-201ENST00000548357 H0YGN5 161 aa18.68■□□□□ 0.58
SNX29P1-201ENST00000548357 SMCR8Q8TEV9 937 aaPredicted RBP18.68■□□□□ 0.58
SNX29P1-201ENST00000548357 COLQQ9Y215 455 aaPredicted RBP18.68■□□□□ 0.58
SNX29P1-201ENST00000548357 NOP58Q9Y2X3 529 aaKnown RBP18.68■□□□□ 0.58
SNX29P1-201ENST00000548357 ADCY3O60266 1144 aa18.67■□□□□ 0.58
SNX29P1-201ENST00000548357 GJA8P48165 433 aa18.67■□□□□ 0.58
SNX29P1-201ENST00000548357 CEP85Q6P2H3 762 aa18.67■□□□□ 0.58
SNX29P1-201ENST00000548357 ZNF280CQ8ND82 737 aa18.67■□□□□ 0.58
SNX29P1-201ENST00000548357 PANK1Q8TE04 598 aa18.67■□□□□ 0.58
SNX29P1-201ENST00000548357 RNF208Q9H0X6 261 aa18.67■□□□□ 0.58
SNX29P1-201ENST00000548357 SAP30BPQ9UHR5 308 aaKnown RBP18.67■□□□□ 0.58
SNX29P1-201ENST00000548357 PALD1Q9ULE6 856 aa18.67■□□□□ 0.58
SNX29P1-201ENST00000548357 TNPO2O14787 897 aaKnown RBP18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 GDF11O95390 407 aa18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 MAP4K4O95819 1239 aaPredicted RBP18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 INHAP05111 366 aa18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 GJB1P08034 283 aa18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 PPP4CP60510 307 aa18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 CCDC158Q5M9N0 1113 aa18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 FTSJ3Q8IY81 847 aaKnown RBP18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 PROCA1Q8NCQ7 364 aaPredicted RBP18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 GCC1Q96CN9 775 aa18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 ASCC2Q9H1I8 757 aaPredicted RBP18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 ANTXR1Q9H6X2 564 aa18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 BIN2Q9UBW5 565 aaPredicted RBP18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 EXOC6BQ9Y2D4 811 aa18.66■□□□□ 0.58
SNX29P1-201ENST00000548357 USP17L5A8MUK1 530 aa18.65■□□□□ 0.58
SNX29P1-201ENST00000548357 FXR1P51114 621 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNX29P1-201ENST00000548357 MTMR2Q13614 643 aa18.65■□□□□ 0.58
SNX29P1-201ENST00000548357 SLAIN1Q8ND83 568 aa18.65■□□□□ 0.58
SNX29P1-201ENST00000548357 ZNF512BQ96KM6 892 aaPredicted RBP18.65■□□□□ 0.58
SNX29P1-201ENST00000548357 FAM110CQ1W6H9 321 aa18.64■□□□□ 0.57
SNX29P1-201ENST00000548357 SH3D19Q5HYK7 790 aa18.64■□□□□ 0.57
SNX29P1-201ENST00000548357 POTEEQ6S8J3 1075 aa18.64■□□□□ 0.57
SNX29P1-201ENST00000548357 METTL16Q86W50 562 aaKnown RBP18.64■□□□□ 0.57
SNX29P1-201ENST00000548357 MIGA1Q8NAN2 632 aa18.64■□□□□ 0.57
SNX29P1-201ENST00000548357 U2AF1L4Q8WU68 220 aaKnown RBP18.64■□□□□ 0.57
SNX29P1-201ENST00000548357 PI4KBQ9UBF8 816 aa18.64■□□□□ 0.57
SNX29P1-201ENST00000548357 HERC5Q9UII4 1024 aaKnown RBP18.64■□□□□ 0.57
SNX29P1-201ENST00000548357 TAOK2Q9UL54 1235 aa18.64■□□□□ 0.57
SNX29P1-201ENST00000548357 RLFQ13129 1914 aa18.64■□□□□ 0.57
SNX29P1-201ENST00000548357 PARP14Q460N5 1801 aa18.63■□□□□ 0.57
SNX29P1-201ENST00000548357 CYP7A1P22680 504 aa18.63■□□□□ 0.57
SNX29P1-201ENST00000548357 EVX2Q03828 476 aa18.63■□□□□ 0.57
SNX29P1-201ENST00000548357 TRIM32Q13049 653 aa18.63■□□□□ 0.57
SNX29P1-201ENST00000548357 NOL10Q9BSC4 688 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms