RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 DNAJC2Q99543 621 aaKnown RBP28.14■■■□□ 2.1
CACNB3-208ENST00000548279 ZCCHC17Q9NP64 241 aaKnown RBP28.14■■■□□ 2.1
CACNB3-208ENST00000548279 AFG3L2Q9Y4W6 797 aa28.14■■■□□ 2.1
CACNB3-208ENST00000548279 TRIM17Q9Y577 477 aa28.14■■■□□ 2.1
CACNB3-208ENST00000548279 FBXO46Q6PJ61 603 aaPredicted RBP28.13■■■□□ 2.09
CACNB3-208ENST00000548279 ANKRD23Q86SG2 305 aa28.13■■■□□ 2.09
CACNB3-208ENST00000548279 ERO1AQ96HE7 468 aa28.13■■■□□ 2.09
CACNB3-208ENST00000548279 DNAJC18Q9H819 358 aa28.13■■■□□ 2.09
CACNB3-208ENST00000548279 GOLIM4O00461 696 aa28.12■■■□□ 2.09
CACNB3-208ENST00000548279 CXCL11O14625 94 aa28.12■■■□□ 2.09
CACNB3-208ENST00000548279 GPAT2Q6NUI2 795 aa28.12■■■□□ 2.09
CACNB3-208ENST00000548279 LRRCC1Q9C099 1032 aa28.12■■■□□ 2.09
CACNB3-208ENST00000548279 SAP30BPQ9UHR5 308 aaKnown RBP28.12■■■□□ 2.09
CACNB3-208ENST00000548279 PALD1Q9ULE6 856 aa28.12■■■□□ 2.09
CACNB3-208ENST00000548279 PDHXO00330 501 aa28.11■■■□□ 2.09
CACNB3-208ENST00000548279 TLR2O60603 784 aa28.11■■■□□ 2.09
CACNB3-208ENST00000548279 SLC4A8Q2Y0W8 1093 aa28.11■■■□□ 2.09
CACNB3-208ENST00000548279 DHX36Q9H2U1 1008 aaKnown RBP28.11■■■□□ 2.09
CACNB3-208ENST00000548279 BOLA2Q9H3K6 86 aa28.11■■■□□ 2.09
CACNB3-208ENST00000548279 PI4KBQ9UBF8 816 aa28.11■■■□□ 2.09
CACNB3-208ENST00000548279 MYH1P12882 1939 aa28.11■■■□□ 2.09
CACNB3-208ENST00000548279 A0A0G2JLL6 359 aaPredicted RBP28.1■■■□□ 2.09
CACNB3-208ENST00000548279 PDE6AP16499 860 aa28.1■■■□□ 2.09
CACNB3-208ENST00000548279 TTF1Q15361 905 aaPredicted RBP28.1■■■□□ 2.09
CACNB3-208ENST00000548279 PRRT2Q7Z6L0 340 aaPredicted RBP28.1■■■□□ 2.09
CACNB3-208ENST00000548279 RIOK1Q9BRS2 568 aaKnown RBP28.1■■■□□ 2.09
CACNB3-208ENST00000548279 DCTPP1Q9H773 170 aa28.1■■■□□ 2.09
CACNB3-208ENST00000548279 HERC5Q9UII4 1024 aaKnown RBP28.1■■■□□ 2.09
CACNB3-208ENST00000548279 PCDHB15Q9Y5E8 787 aa28.1■■■□□ 2.09
CACNB3-208ENST00000548279 ADGRA2Q96PE1 1338 aa28.1■■■□□ 2.09
CACNB3-208ENST00000548279 DDX60LQ5H9U9 1706 aaKnown RBP28.09■■■□□ 2.09
CACNB3-208ENST00000548279 ATP5JP18859 108 aa28.09■■■□□ 2.09
CACNB3-208ENST00000548279 CAP2P40123 477 aa28.09■■■□□ 2.09
CACNB3-208ENST00000548279 JAG1P78504 1218 aa28.08■■■□□ 2.09
CACNB3-208ENST00000548279 SHROOM1Q2M3G4 852 aaPredicted RBP28.08■■■□□ 2.09
CACNB3-208ENST00000548279 SLFNL1Q499Z3 407 aa28.08■■■□□ 2.09
CACNB3-208ENST00000548279 SLC9C2Q5TAH2 1124 aa28.08■■■□□ 2.09
CACNB3-208ENST00000548279 METTL16Q86W50 562 aaKnown RBP28.08■■■□□ 2.09
CACNB3-208ENST00000548279 HTTP42858 3142 aa28.07■■■□□ 2.08
CACNB3-208ENST00000548279 TCRBV5S4A2TA0A5A2 114 aa28.07■■■□□ 2.08
CACNB3-208ENST00000548279 TRIM75PA6NK02 468 aa28.07■■■□□ 2.08
CACNB3-208ENST00000548279 RGS19P49795 217 aa28.07■■■□□ 2.08
CACNB3-208ENST00000548279 SOX10P56693 466 aa28.07■■■□□ 2.08
CACNB3-208ENST00000548279 ARHGAP39Q9C0H5 1083 aa28.07■■■□□ 2.08
CACNB3-208ENST00000548279 EFCC1Q9HA90 598 aa28.07■■■□□ 2.08
CACNB3-208ENST00000548279 PAG1Q9NWQ8 432 aa28.07■■■□□ 2.08
CACNB3-208ENST00000548279 ZNF532Q9HCE3 1301 aa28.07■■■□□ 2.08
CACNB3-208ENST00000548279 CHGBP05060 677 aa28.06■■■□□ 2.08
CACNB3-208ENST00000548279 USP5P45974 858 aa28.06■■■□□ 2.08
CACNB3-208ENST00000548279 TMED8Q6PL24 325 aaPredicted RBP28.06■■■□□ 2.08
CACNB3-208ENST00000548279 C17orf99Q6UX52 265 aa28.06■■■□□ 2.08
CACNB3-208ENST00000548279 GADL1Q6ZQY3 521 aa28.06■■■□□ 2.08
CACNB3-208ENST00000548279 HAUS7Q99871 368 aa28.06■■■□□ 2.08
CACNB3-208ENST00000548279 CPA4Q9UI42 421 aa28.06■■■□□ 2.08
CACNB3-208ENST00000548279 NAV1Q8NEY1 1877 aa28.05■■■□□ 2.08
CACNB3-208ENST00000548279 CRBNQ96SW2 442 aa28.05■■■□□ 2.08
CACNB3-208ENST00000548279 PTPN22Q9Y2R2 807 aa28.05■■■□□ 2.08
CACNB3-208ENST00000548279 LOC285556D6RIA3 1793 aa28.04■■■□□ 2.08
CACNB3-208ENST00000548279 MAGEB6P1A0A0J9YX57 407 aa28.04■■■□□ 2.08
CACNB3-208ENST00000548279 CYP2C8P10632 490 aa28.04■■■□□ 2.08
CACNB3-208ENST00000548279 CERS3Q8IU89 383 aa28.04■■■□□ 2.08
CACNB3-208ENST00000548279 FOXP4Q8IVH2 680 aaPredicted RBP28.04■■■□□ 2.08
CACNB3-208ENST00000548279 MYH7P12883 1935 aa28.03■■■□□ 2.08
CACNB3-208ENST00000548279 CTGFP29279 349 aa28.03■■■□□ 2.08
CACNB3-208ENST00000548279 LACTBP83111 547 aaPredicted RBP28.03■■■□□ 2.08
CACNB3-208ENST00000548279 SPP2Q13103 211 aa28.03■■■□□ 2.08
CACNB3-208ENST00000548279 FASTKD5Q7L8L6 764 aaKnown RBP28.03■■■□□ 2.08
CACNB3-208ENST00000548279 CRACR2BQ8N4Y2 399 aaPredicted RBP28.03■■■□□ 2.08
CACNB3-208ENST00000548279 ECM2O94769 699 aaPredicted RBP28.02■■■□□ 2.08
CACNB3-208ENST00000548279 GDF11O95390 407 aa28.02■■■□□ 2.08
CACNB3-208ENST00000548279 HLA-DOAP06340 250 aa28.02■■■□□ 2.08
CACNB3-208ENST00000548279 LCORLQ8N3X6 602 aa28.02■■■□□ 2.08
CACNB3-208ENST00000548279 USP17L5A8MUK1 530 aa28.01■■■□□ 2.07
CACNB3-208ENST00000548279 ADD2P35612 726 aa28.01■■■□□ 2.07
CACNB3-208ENST00000548279 TREML2Q5T2D2 321 aa28.01■■■□□ 2.07
CACNB3-208ENST00000548279 TSHZ3Q63HK5 1081 aa28.01■■■□□ 2.07
CACNB3-208ENST00000548279 ZNF280CQ8ND82 737 aa28.01■■■□□ 2.07
CACNB3-208ENST00000548279 PARK7Q99497 189 aaKnown RBP28.01■■■□□ 2.07
CACNB3-208ENST00000548279 EVX2Q03828 476 aa28■■■□□ 2.07
CACNB3-208ENST00000548279 BCRP11274 1271 aa27.99■■■□□ 2.07
CACNB3-208ENST00000548279 PLCD1P51178 756 aa27.99■■■□□ 2.07
CACNB3-208ENST00000548279 TRIM34Q9BYJ4 488 aa27.99■■■□□ 2.07
CACNB3-208ENST00000548279 ECHDC1Q9NTX5 307 aa27.99■■■□□ 2.07
CACNB3-208ENST00000548279 AGTPBP1Q9UPW5 1226 aa27.99■■■□□ 2.07
CACNB3-208ENST00000548279 HMGCS2P54868 508 aa27.98■■■□□ 2.07
CACNB3-208ENST00000548279 SDR42E1Q8WUS8 393 aa27.98■■■□□ 2.07
CACNB3-208ENST00000548279 ARMT1Q9H993 441 aa27.98■■■□□ 2.07
CACNB3-208ENST00000548279 ZBTB21Q9ULJ3 1066 aa27.98■■■□□ 2.07
CACNB3-208ENST00000548279 SLC45A1Q9Y2W3 748 aa27.98■■■□□ 2.07
CACNB3-208ENST00000548279 PTCH2Q9Y6C5 1203 aa27.98■■■□□ 2.07
CACNB3-208ENST00000548279 ASNSP08243 561 aa27.97■■■□□ 2.07
CACNB3-208ENST00000548279 TBC1D2Q9BYX2 928 aa27.97■■■□□ 2.07
CACNB3-208ENST00000548279 CRNKL1Q9BZJ0 848 aaKnown RBP27.97■■■□□ 2.07
CACNB3-208ENST00000548279 EHD4Q9H223 541 aa27.97■■■□□ 2.07
CACNB3-208ENST00000548279 MLLT1Q03111 559 aaPredicted RBP27.96■■■□□ 2.07
CACNB3-208ENST00000548279 PROCA1Q8NCQ7 364 aaPredicted RBP27.96■■■□□ 2.07
CACNB3-208ENST00000548279 WDR18Q9BV38 432 aa27.96■■■□□ 2.07
CACNB3-208ENST00000548279 SERPINB13Q9UIV8 391 aa27.96■■■□□ 2.07
CACNB3-208ENST00000548279 PRKAB2O43741 272 aa27.95■■■□□ 2.06
CACNB3-208ENST00000548279 MBD4O95243 580 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms