RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 AATFQ9NY61 560 aaKnown RBP eCLIP25.03■■□□□ 1.6
SSH1-207ENST00000547862 TAOK2Q9UL54 1235 aa25.03■■□□□ 1.6
SSH1-207ENST00000547862 FPGT-TNNI3KV9GXZ4 949 aa25.03■■□□□ 1.6
SSH1-207ENST00000547862 CCL5P13501 91 aa25.02■■□□□ 1.6
SSH1-207ENST00000547862 HABP4Q5JVS0 413 aaKnown RBP25.02■■□□□ 1.6
SSH1-207ENST00000547862 TREML2Q5T2D2 321 aa25.02■■□□□ 1.6
SSH1-207ENST00000547862 ITPRIPQ8IWB1 547 aa25.02■■□□□ 1.6
SSH1-207ENST00000547862 DOCK3Q8IZD9 2030 aa25.02■■□□□ 1.6
SSH1-207ENST00000547862 NAA16Q6N069 864 aaPredicted RBP25.01■■□□□ 1.59
SSH1-207ENST00000547862 AGTPBP1Q9UPW5 1226 aa25.01■■□□□ 1.59
SSH1-207ENST00000547862 TNPO2O14787 897 aaKnown RBP25■■□□□ 1.59
SSH1-207ENST00000547862 SURF6O75683 361 aaKnown RBP25■■□□□ 1.59
SSH1-207ENST00000547862 UBXN2AP68543 259 aa25■■□□□ 1.59
SSH1-207ENST00000547862 POLA2Q14181 598 aa25■■□□□ 1.59
SSH1-207ENST00000547862 CCDC158Q5M9N0 1113 aa25■■□□□ 1.59
SSH1-207ENST00000547862 ANKRD13CQ8N6S4 541 aa25■■□□□ 1.59
SSH1-207ENST00000547862 RNF208Q9H0X6 261 aa25■■□□□ 1.59
SSH1-207ENST00000547862 TBC1D12O60347 775 aa24.99■■□□□ 1.59
SSH1-207ENST00000547862 MYH1P12882 1939 aa24.99■■□□□ 1.59
SSH1-207ENST00000547862 SPP2Q13103 211 aa24.99■■□□□ 1.59
SSH1-207ENST00000547862 SLC45A1Q9Y2W3 748 aa24.99■■□□□ 1.59
SSH1-207ENST00000547862 NPM3O75607 178 aaKnown RBP24.98■■□□□ 1.59
SSH1-207ENST00000547862 ELNP15502 786 aa24.98■■□□□ 1.59
SSH1-207ENST00000547862 HMGCS2P54868 508 aa24.98■■□□□ 1.59
SSH1-207ENST00000547862 RRP1BQ14684 758 aaKnown RBP24.98■■□□□ 1.59
SSH1-207ENST00000547862 MAPKAPK5Q8IW41 473 aa24.98■■□□□ 1.59
SSH1-207ENST00000547862 SLAIN1Q8ND83 568 aa24.98■■□□□ 1.59
SSH1-207ENST00000547862 PCDH10Q9P2E7 1040 aa24.98■■□□□ 1.59
SSH1-207ENST00000547862 PNMA3Q9UL41 463 aa24.98■■□□□ 1.59
SSH1-207ENST00000547862 ADCY3O60266 1144 aa24.97■■□□□ 1.59
SSH1-207ENST00000547862 MAP4K4O95819 1239 aaPredicted RBP24.97■■□□□ 1.59
SSH1-207ENST00000547862 FLT3LGP49771 235 aa24.97■■□□□ 1.59
SSH1-207ENST00000547862 ZNF280CQ8ND82 737 aa24.97■■□□□ 1.59
SSH1-207ENST00000547862 SSH3Q8TE77 659 aa24.97■■□□□ 1.59
SSH1-207ENST00000547862 TGFBRAP1Q8WUH2 860 aa24.97■■□□□ 1.59
SSH1-207ENST00000547862 TLR7Q9NYK1 1049 aaKnown RBP24.97■■□□□ 1.59
SSH1-207ENST00000547862 BAG3O95817 575 aa24.96■■□□□ 1.59
SSH1-207ENST00000547862 CAP2P40123 477 aa24.96■■□□□ 1.59
SSH1-207ENST00000547862 ZAP70P43403 619 aa24.96■■□□□ 1.59
SSH1-207ENST00000547862 ATP8B2P98198 1209 aa24.96■■□□□ 1.59
SSH1-207ENST00000547862 ADGRA1Q86SQ6 560 aa24.96■■□□□ 1.59
SSH1-207ENST00000547862 UNC93B1Q9H1C4 597 aa24.96■■□□□ 1.59
SSH1-207ENST00000547862 GPR108Q9NPR9 543 aa24.96■■□□□ 1.59
SSH1-207ENST00000547862 FLT1P17948 1338 aa24.95■■□□□ 1.58
SSH1-207ENST00000547862 H0YGN5 161 aa24.95■■□□□ 1.58
SSH1-207ENST00000547862 CYP2E1P05181 493 aaPredicted RBP24.95■■□□□ 1.58
SSH1-207ENST00000547862 RLBP1P12271 317 aa24.95■■□□□ 1.58
SSH1-207ENST00000547862 PROCA1Q8NCQ7 364 aaPredicted RBP24.95■■□□□ 1.58
SSH1-207ENST00000547862 NKX2-3Q8TAU0 364 aa24.95■■□□□ 1.58
SSH1-207ENST00000547862 TRIM34Q9BYJ4 488 aa24.95■■□□□ 1.58
SSH1-207ENST00000547862 CCDC8Q9H0W5 538 aaPredicted RBP24.95■■□□□ 1.58
SSH1-207ENST00000547862 SAP30BPQ9UHR5 308 aaKnown RBP24.95■■□□□ 1.58
SSH1-207ENST00000547862 CEP290O15078 2479 aa24.95■■□□□ 1.58
SSH1-207ENST00000547862 USP17L5A8MUK1 530 aa24.94■■□□□ 1.58
SSH1-207ENST00000547862 INHAP05111 366 aa24.94■■□□□ 1.58
SSH1-207ENST00000547862 GJA8P48165 433 aa24.94■■□□□ 1.58
SSH1-207ENST00000547862 CRACR2BQ8N4Y2 399 aaPredicted RBP24.94■■□□□ 1.58
SSH1-207ENST00000547862 DPF3Q92784 378 aa24.94■■□□□ 1.58
SSH1-207ENST00000547862 PIH1D3Q9NQM4 214 aaKnown RBP24.94■■□□□ 1.58
SSH1-207ENST00000547862 HERC5Q9UII4 1024 aaKnown RBP24.94■■□□□ 1.58
SSH1-207ENST00000547862 COLQQ9Y215 455 aaPredicted RBP24.94■■□□□ 1.58
SSH1-207ENST00000547862 GJB1P08034 283 aa24.93■■□□□ 1.58
SSH1-207ENST00000547862 PLCG2P16885 1265 aa24.93■■□□□ 1.58
SSH1-207ENST00000547862 SHROOM1Q2M3G4 852 aaPredicted RBP24.93■■□□□ 1.58
SSH1-207ENST00000547862 COA7Q96BR5 231 aa24.93■■□□□ 1.58
SSH1-207ENST00000547862 AS3MTQ9HBK9 375 aa24.93■■□□□ 1.58
SSH1-207ENST00000547862 PI4KBQ9UBF8 816 aa24.93■■□□□ 1.58
SSH1-207ENST00000547862 DBNLQ9UJU6 430 aaKnown RBP24.93■■□□□ 1.58
SSH1-207ENST00000547862 NAV1Q8NEY1 1877 aa24.92■■□□□ 1.58
SSH1-207ENST00000547862 GDF11O95390 407 aa24.92■■□□□ 1.58
SSH1-207ENST00000547862 DYNLL1P63167 89 aaKnown RBP24.92■■□□□ 1.58
SSH1-207ENST00000547862 MTMR2Q13614 643 aa24.92■■□□□ 1.58
SSH1-207ENST00000547862 FAM110CQ1W6H9 321 aa24.92■■□□□ 1.58
SSH1-207ENST00000547862 MIER1Q8N108 512 aa24.92■■□□□ 1.58
SSH1-207ENST00000547862 U2AF1L4Q8WU68 220 aaKnown RBP24.92■■□□□ 1.58
SSH1-207ENST00000547862 PALD1Q9ULE6 856 aa24.92■■□□□ 1.58
SSH1-207ENST00000547862 NDUFB9Q9Y6M9 179 aa24.92■■□□□ 1.58
SSH1-207ENST00000547862 IDH1O75874 414 aaKnown RBP24.91■■□□□ 1.58
SSH1-207ENST00000547862 FARP2O94887 1054 aaPredicted RBP24.91■■□□□ 1.58
SSH1-207ENST00000547862 PABPC4Q13310 644 aaKnown RBP eCLIP24.91■■□□□ 1.58
SSH1-207ENST00000547862 TBC1D2Q9BYX2 928 aa24.91■■□□□ 1.58
SSH1-207ENST00000547862 ASCC2Q9H1I8 757 aaPredicted RBP24.91■■□□□ 1.58
SSH1-207ENST00000547862 DHX36Q9H2U1 1008 aaKnown RBP24.91■■□□□ 1.58
SSH1-207ENST00000547862 DNAJC18Q9H819 358 aa24.91■■□□□ 1.58
SSH1-207ENST00000547862 PLXNB2O15031 1838 aa24.91■■□□□ 1.58
SSH1-207ENST00000547862 CYP7A1P22680 504 aa24.9■■□□□ 1.58
SSH1-207ENST00000547862 MIGA1Q8NAN2 632 aa24.9■■□□□ 1.58
SSH1-207ENST00000547862 IRX3P78415 501 aaPredicted RBP24.89■■□□□ 1.58
SSH1-207ENST00000547862 TMOD4Q9NZQ9 345 aa24.89■■□□□ 1.58
SSH1-207ENST00000547862 EXOC6BQ9Y2D4 811 aa24.89■■□□□ 1.58
SSH1-207ENST00000547862 HLA-DOAP06340 250 aa24.88■■□□□ 1.57
SSH1-207ENST00000547862 JAG1P78504 1218 aa24.88■■□□□ 1.57
SSH1-207ENST00000547862 IRF5Q13568 498 aa24.88■■□□□ 1.57
SSH1-207ENST00000547862 CHRDL2Q6WN34 429 aa24.88■■□□□ 1.57
SSH1-207ENST00000547862 EAF2Q96CJ1 260 aaPredicted RBP24.88■■□□□ 1.57
SSH1-207ENST00000547862 DEFB118Q96PH6 123 aa24.88■■□□□ 1.57
SSH1-207ENST00000547862 ALPK3Q96L96 1907 aa24.88■■□□□ 1.57
SSH1-207ENST00000547862 ZBTB7BO15156 539 aaPredicted RBP24.87■■□□□ 1.57
SSH1-207ENST00000547862 ASNSP08243 561 aa24.87■■□□□ 1.57
SSH1-207ENST00000547862 GCLCP48506 637 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms