RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 SH3BP5LQ7L8J4 393 aa16.83■□□□□ 0.28
CCDC59-202ENST00000547758 ZSCAN29Q8IWY8 852 aaPredicted RBP16.83■□□□□ 0.28
CCDC59-202ENST00000547758 PNMA3Q9UL41 463 aa16.83■□□□□ 0.28
CCDC59-202ENST00000547758 TREML2Q5T2D2 321 aa16.82■□□□□ 0.28
CCDC59-202ENST00000547758 NBPF3Q9H094 633 aa16.82■□□□□ 0.28
CCDC59-202ENST00000547758 GNL3LQ9NVN8 582 aaKnown RBP16.82■□□□□ 0.28
CCDC59-202ENST00000547758 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.82■□□□□ 0.28
CCDC59-202ENST00000547758 GAKO14976 1311 aa16.81■□□□□ 0.28
CCDC59-202ENST00000547758 DDTLA6NHG4 134 aaPredicted RBP16.81■□□□□ 0.28
CCDC59-202ENST00000547758 SLURP2P0DP57 97 aa16.81■□□□□ 0.28
CCDC59-202ENST00000547758 SYN1P17600 705 aa16.81■□□□□ 0.28
CCDC59-202ENST00000547758 MAGEA10P43363 369 aaPredicted RBP16.81■□□□□ 0.28
CCDC59-202ENST00000547758 RFX5P48382 616 aaPredicted RBP16.81■□□□□ 0.28
CCDC59-202ENST00000547758 TDHQ8IZJ6 230 aa16.81■□□□□ 0.28
CCDC59-202ENST00000547758 MTMR10Q9NXD2 777 aa16.81■□□□□ 0.28
CCDC59-202ENST00000547758 FRMPD3Q5JV73 1810 aa16.8■□□□□ 0.28
CCDC59-202ENST00000547758 RPTORQ8N122 1335 aa16.8■□□□□ 0.28
CCDC59-202ENST00000547758 ATP2B3Q16720 1220 aa16.8■□□□□ 0.28
CCDC59-202ENST00000547758 ATG9AQ7Z3C6 839 aa16.8■□□□□ 0.28
CCDC59-202ENST00000547758 CCDC84Q86UT8 332 aaPredicted RBP16.8■□□□□ 0.28
CCDC59-202ENST00000547758 PROCA1Q8NCQ7 364 aaPredicted RBP16.8■□□□□ 0.28
CCDC59-202ENST00000547758 USP44Q9H0E7 712 aa16.8■□□□□ 0.28
CCDC59-202ENST00000547758 C11orf49Q9H6J7 331 aa16.8■□□□□ 0.28
CCDC59-202ENST00000547758 HMX1Q9NP08 348 aaPredicted RBP16.8■□□□□ 0.28
CCDC59-202ENST00000547758 DENND2AQ9ULE3 1009 aa16.8■□□□□ 0.28
CCDC59-202ENST00000547758 VCANP13611 3396 aa16.79■□□□□ 0.28
CCDC59-202ENST00000547758 SEMA3EO15041 775 aa16.79■□□□□ 0.28
CCDC59-202ENST00000547758 GCLCP48506 637 aaPredicted RBP16.79■□□□□ 0.28
CCDC59-202ENST00000547758 TRIM32Q13049 653 aa16.79■□□□□ 0.28
CCDC59-202ENST00000547758 DDX4Q9NQI0 724 aaKnown RBP16.79■□□□□ 0.28
CCDC59-202ENST00000547758 LAMA2P24043 3122 aaKnown RBP16.79■□□□□ 0.28
CCDC59-202ENST00000547758 PHKA1P46020 1223 aa16.78■□□□□ 0.28
CCDC59-202ENST00000547758 PICALMQ13492 652 aa16.78■□□□□ 0.28
CCDC59-202ENST00000547758 DZIP1Q86YF9 867 aaKnown RBP16.78■□□□□ 0.28
CCDC59-202ENST00000547758 ZGPATQ8N5A5 531 aaKnown RBP16.78■□□□□ 0.28
CCDC59-202ENST00000547758 UBE2OQ9C0C9 1292 aaKnown RBP16.78■□□□□ 0.28
CCDC59-202ENST00000547758 MRS2Q9HD23 443 aa16.78■□□□□ 0.28
CCDC59-202ENST00000547758 GJD2Q9UKL4 321 aa16.78■□□□□ 0.28
CCDC59-202ENST00000547758 PTPRCP08575 1304 aa16.77■□□□□ 0.28
CCDC59-202ENST00000547758 MRPL50Q8N5N7 158 aaKnown RBP16.77■□□□□ 0.28
CCDC59-202ENST00000547758 SIL1Q9H173 461 aa16.77■□□□□ 0.28
CCDC59-202ENST00000547758 OGDHLQ9ULD0 1010 aa16.77■□□□□ 0.28
CCDC59-202ENST00000547758 TBC1D12O60347 775 aa16.76■□□□□ 0.27
CCDC59-202ENST00000547758 CIAO1O76071 339 aa16.76■□□□□ 0.27
CCDC59-202ENST00000547758 BTDP43251 543 aa16.76■□□□□ 0.27
CCDC59-202ENST00000547758 SPP2Q13103 211 aa16.76■□□□□ 0.27
CCDC59-202ENST00000547758 PABPC4Q13310 644 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCDC59-202ENST00000547758 SLF2Q8IX21 1173 aa16.76■□□□□ 0.27
CCDC59-202ENST00000547758 TRIB2Q92519 343 aa16.76■□□□□ 0.27
CCDC59-202ENST00000547758 COL25A1Q9BXS0 654 aaPredicted RBP16.76■□□□□ 0.27
CCDC59-202ENST00000547758 CEP126Q9P2H0 1117 aa16.76■□□□□ 0.27
CCDC59-202ENST00000547758 FBXO3Q9UK99 471 aa16.76■□□□□ 0.27
CCDC59-202ENST00000547758 DNAH12Q6ZR08 3092 aa16.76■□□□□ 0.27
CCDC59-202ENST00000547758 PFASO15067 1338 aa16.75■□□□□ 0.27
CCDC59-202ENST00000547758 MAST2Q6P0Q8 1798 aa16.75■□□□□ 0.27
CCDC59-202ENST00000547758 HMGCS2P54868 508 aa16.75■□□□□ 0.27
CCDC59-202ENST00000547758 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
CCDC59-202ENST00000547758 FAM163AQ96GL9 167 aaPredicted RBP16.75■□□□□ 0.27
CCDC59-202ENST00000547758 TBC1D2Q9BYX2 928 aa16.75■□□□□ 0.27
CCDC59-202ENST00000547758 OSBPL5Q9H0X9 879 aaPredicted RBP16.75■□□□□ 0.27
CCDC59-202ENST00000547758 ASCC2Q9H1I8 757 aaPredicted RBP16.75■□□□□ 0.27
CCDC59-202ENST00000547758 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCDC59-202ENST00000547758 ABCF2Q9UG63 623 aa16.75■□□□□ 0.27
CCDC59-202ENST00000547758 EYSQ5T1H1 3165 aa16.75■□□□□ 0.27
CCDC59-202ENST00000547758 MROH7-TTC4A0A0A0MT08 1334 aa16.74■□□□□ 0.27
CCDC59-202ENST00000547758 FAM196BA6NMK8 535 aa16.74■□□□□ 0.27
CCDC59-202ENST00000547758 MAP3K21Q5TCX8 1036 aa16.74■□□□□ 0.27
CCDC59-202ENST00000547758 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
CCDC59-202ENST00000547758 SIPA1L1O43166 1804 aa16.74■□□□□ 0.27
CCDC59-202ENST00000547758 COL2A1P02458 1487 aaPredicted RBP16.73■□□□□ 0.27
CCDC59-202ENST00000547758 CDK5RAP2Q96SN8 1893 aa16.73■□□□□ 0.27
CCDC59-202ENST00000547758 PDS5AQ29RF7 1337 aaKnown RBP16.73■□□□□ 0.27
CCDC59-202ENST00000547758 CYP2B6P20813 491 aa16.73■□□□□ 0.27
CCDC59-202ENST00000547758 ADORA1P30542 326 aa16.73■□□□□ 0.27
CCDC59-202ENST00000547758 RASGRF1Q13972 1273 aa16.73■□□□□ 0.27
CCDC59-202ENST00000547758 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCDC59-202ENST00000547758 MORF4L1Q9UBU8 362 aa16.73■□□□□ 0.27
CCDC59-202ENST00000547758 IL15P40933 162 aaPredicted RBP16.72■□□□□ 0.27
CCDC59-202ENST00000547758 RHBDL3P58872 404 aa16.72■□□□□ 0.27
CCDC59-202ENST00000547758 SPTY2D1Q68D10 685 aaPredicted RBP16.72■□□□□ 0.27
CCDC59-202ENST00000547758 FOCADQ5VW36 1801 aa16.71■□□□□ 0.27
CCDC59-202ENST00000547758 GPR75-ASB3A0A0A6YYF3 556 aa16.71■□□□□ 0.27
CCDC59-202ENST00000547758 USP17L5A8MUK1 530 aa16.71■□□□□ 0.27
CCDC59-202ENST00000547758 COL6A1P12109 1028 aa16.71■□□□□ 0.27
CCDC59-202ENST00000547758 CAP2P40123 477 aa16.71■□□□□ 0.27
CCDC59-202ENST00000547758 SH3D19Q5HYK7 790 aa16.71■□□□□ 0.27
CCDC59-202ENST00000547758 SOCS4Q8WXH5 440 aa16.71■□□□□ 0.27
CCDC59-202ENST00000547758 NUDT12Q9BQG2 462 aa16.71■□□□□ 0.27
CCDC59-202ENST00000547758 TSPYL2Q9H2G4 693 aaPredicted RBP16.71■□□□□ 0.27
CCDC59-202ENST00000547758 SPTBN5Q9NRC6 3674 aaKnown RBP16.71■□□□□ 0.27
CCDC59-202ENST00000547758 XRCC5P13010 732 aaKnown RBP16.7■□□□□ 0.26
CCDC59-202ENST00000547758 IRX3P78415 501 aaPredicted RBP16.7■□□□□ 0.26
CCDC59-202ENST00000547758 MDM2Q00987 491 aaPredicted RBP16.7■□□□□ 0.26
CCDC59-202ENST00000547758 MECOMQ03112 1051 aa16.7■□□□□ 0.26
CCDC59-202ENST00000547758 GUCD1Q96NT3 240 aa16.7■□□□□ 0.26
CCDC59-202ENST00000547758 AS3MTQ9HBK9 375 aa16.7■□□□□ 0.26
CCDC59-202ENST00000547758 LTBP2Q14767 1821 aa16.7■□□□□ 0.26
CCDC59-202ENST00000547758 CDH23Q9H251 3354 aa16.69■□□□□ 0.26
CCDC59-202ENST00000547758 UBTFL1P0CB47 393 aaPredicted RBP16.69■□□□□ 0.26
CCDC59-202ENST00000547758 ZKSCAN1P17029 563 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms