RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 WDR33Q9C0J8 1336 aaKnown RBP19.26■□□□□ 0.67
BRF1-208ENST00000546997 TDO2P48775 406 aa19.26■□□□□ 0.67
BRF1-208ENST00000546997 PPP4CP60510 307 aa19.26■□□□□ 0.67
BRF1-208ENST00000546997 BLOC1S2Q6QNY1 142 aa19.26■□□□□ 0.67
BRF1-208ENST00000546997 SH2B1Q9NRF2 756 aaPredicted RBP19.26■□□□□ 0.67
BRF1-208ENST00000546997 BAG3O95817 575 aa19.25■□□□□ 0.67
BRF1-208ENST00000546997 RPS6KB1P23443 525 aa19.25■□□□□ 0.67
BRF1-208ENST00000546997 KRT32Q14532 448 aa19.25■□□□□ 0.67
BRF1-208ENST00000546997 SLF2Q8IX21 1173 aa19.25■□□□□ 0.67
BRF1-208ENST00000546997 RNF214Q8ND24 703 aa19.25■□□□□ 0.67
BRF1-208ENST00000546997 JDP2Q8WYK2 163 aa19.25■□□□□ 0.67
BRF1-208ENST00000546997 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
BRF1-208ENST00000546997 NACAP1Q9BZK3 213 aa19.25■□□□□ 0.67
BRF1-208ENST00000546997 DDX60LQ5H9U9 1706 aaKnown RBP19.25■□□□□ 0.67
BRF1-208ENST00000546997 TIAM2Q8IVF5 1701 aa19.25■□□□□ 0.67
BRF1-208ENST00000546997 YBX3P16989 372 aaKnown RBP eCLIP19.24■□□□□ 0.67
BRF1-208ENST00000546997 CXCL9Q07325 125 aa19.24■□□□□ 0.67
BRF1-208ENST00000546997 CCDC183Q5T5S1 534 aa19.24■□□□□ 0.67
BRF1-208ENST00000546997 TBC1D10CQ8IV04 446 aa19.24■□□□□ 0.67
BRF1-208ENST00000546997 ZNF710Q8N1W2 664 aa19.24■□□□□ 0.67
BRF1-208ENST00000546997 PCDHAC2Q9Y5I4 1007 aa19.24■□□□□ 0.67
BRF1-208ENST00000546997 MYH1P12882 1939 aa19.24■□□□□ 0.67
BRF1-208ENST00000546997 E7EWF7 191 aa19.24■□□□□ 0.67
BRF1-208ENST00000546997 SMIM22K7EJ46 135 aa19.24■□□□□ 0.67
BRF1-208ENST00000546997 ZNF213O14771 459 aa19.24■□□□□ 0.67
BRF1-208ENST00000546997 VIL1P09327 827 aaKnown RBP19.24■□□□□ 0.67
BRF1-208ENST00000546997 RHBDL3P58872 404 aa19.24■□□□□ 0.67
BRF1-208ENST00000546997 FOXD4L5Q5VV16 416 aaPredicted RBP19.24■□□□□ 0.67
BRF1-208ENST00000546997 RSBN1LQ6PCB5 846 aaPredicted RBP19.24■□□□□ 0.67
BRF1-208ENST00000546997 FOXD4L4Q8WXT5 416 aaPredicted RBP19.24■□□□□ 0.67
BRF1-208ENST00000546997 NOL10Q9BSC4 688 aaKnown RBP19.24■□□□□ 0.67
BRF1-208ENST00000546997 DCP1AQ9NPI6 582 aaPredicted RBP19.24■□□□□ 0.67
BRF1-208ENST00000546997 CRKP46108 304 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 ME3Q16798 604 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 ARHGAP27Q6ZUM4 889 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 TEKT1Q969V4 418 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 TPCN1Q9ULQ1 816 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 ZBTB12Q9Y330 459 aaPredicted RBP19.23■□□□□ 0.67
BRF1-208ENST00000546997 EVX2Q03828 476 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 ANKRD1Q15327 319 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 HHIPL2Q6UWX4 724 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 CCDC83Q8IWF9 413 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 TCEANC2Q96MN5 208 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 GMLQ99445 158 aa19.23■□□□□ 0.67
BRF1-208ENST00000546997 MKRN1Q9UHC7 482 aaKnown RBP19.23■□□□□ 0.67
BRF1-208ENST00000546997 CYP2D7A0A087X1C5 515 aa19.22■□□□□ 0.67
BRF1-208ENST00000546997 APOBEC3HQ6NTF7 200 aaKnown RBP19.22■□□□□ 0.67
BRF1-208ENST00000546997 TGFBRAP1Q8WUH2 860 aa19.22■□□□□ 0.67
BRF1-208ENST00000546997 NEK1Q96PY6 1258 aa19.22■□□□□ 0.67
BRF1-208ENST00000546997 SMC3Q9UQE7 1217 aa19.22■□□□□ 0.67
BRF1-208ENST00000546997 MYO3BQ8WXR4 1341 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 CTDSPL2Q05D32 466 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 ST3GAL1Q11201 340 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 TAF3Q5VWG9 929 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 ATP8A2Q9NTI2 1148 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 ECM2O94769 699 aaPredicted RBP19.21■□□□□ 0.67
BRF1-208ENST00000546997 TOB2Q14106 344 aaPredicted RBP19.21■□□□□ 0.67
BRF1-208ENST00000546997 SYCP1Q15431 976 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 GIMAP6Q6P9H5 292 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 TEX11Q8IYF3 940 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 NKX2-3Q8TAU0 364 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 CHAMP1Q96JM3 812 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 ZDHHC15Q96MV8 337 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 INCENPQ9NQS7 918 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 TACC3Q9Y6A5 838 aa19.21■□□□□ 0.67
BRF1-208ENST00000546997 MINDY4BA8MYZ0 360 aa19.2■□□□□ 0.66
BRF1-208ENST00000546997 USP5P45974 858 aa19.2■□□□□ 0.66
BRF1-208ENST00000546997 CIAPIN1Q6FI81 312 aa19.2■□□□□ 0.66
BRF1-208ENST00000546997 CTR9Q6PD62 1173 aa19.2■□□□□ 0.66
BRF1-208ENST00000546997 CERS3Q8IU89 383 aa19.2■□□□□ 0.66
BRF1-208ENST00000546997 FEZ1Q99689 392 aa19.2■□□□□ 0.66
BRF1-208ENST00000546997 USP25Q9UHP3 1055 aa19.2■□□□□ 0.66
BRF1-208ENST00000546997 SERPINA10Q9UK55 444 aa19.2■□□□□ 0.66
BRF1-208ENST00000546997 USP17L12C9JPN9 530 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 USP17L21D6R901 530 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 KDM4AO75164 1064 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 PLCG2P16885 1265 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 HDLBPQ00341 1268 aaKnown RBP19.19■□□□□ 0.66
BRF1-208ENST00000546997 PPARAQ07869 468 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 SLC4A8Q2Y0W8 1093 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 MAPKAPK5Q8IW41 473 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 NEDD4P46934 1319 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 FZD9O00144 591 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 ADCY5O95622 1261 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 USP17L8P0C7I0 530 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 CYP2D6P10635 497 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 SYT1P21579 422 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 RBM5P52756 815 aaKnown RBP eCLIP19.19■□□□□ 0.66
BRF1-208ENST00000546997 CDC42EP5Q6NZY7 148 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 STK11IPQ8N1F8 1099 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 NECAB1Q8N987 351 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 ANKRD7Q92527 254 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 MRIQ9BWK5 157 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 MCM9Q9NXL9 1143 aa19.19■□□□□ 0.66
BRF1-208ENST00000546997 FLT1P17948 1338 aa19.18■□□□□ 0.66
BRF1-208ENST00000546997 WDHD1O75717 1129 aaPredicted RBP19.18■□□□□ 0.66
BRF1-208ENST00000546997 GJB2P29033 226 aa19.18■□□□□ 0.66
BRF1-208ENST00000546997 USP48Q86UV5 1035 aa19.18■□□□□ 0.66
BRF1-208ENST00000546997 ZNF541Q9H0D2 1346 aa19.18■□□□□ 0.66
BRF1-208ENST00000546997 CTIFO43310 598 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms