RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 WFDC12Q8WWY7 111 aa9.49□□□□□ -0.89
NPAS3-204ENST00000546849 PPP1R9AQ9ULJ8 1098 aa9.49□□□□□ -0.89
NPAS3-204ENST00000546849 HIF3AQ9Y2N7 669 aa9.49□□□□□ -0.89
NPAS3-204ENST00000546849 PCDHB14Q9Y5E9 798 aa9.49□□□□□ -0.89
NPAS3-204ENST00000546849 PGRP06401 933 aa9.48□□□□□ -0.89
NPAS3-204ENST00000546849 PLCG1P19174 1290 aa9.48□□□□□ -0.89
NPAS3-204ENST00000546849 GTF2F1P35269 517 aaKnown RBP eCLIP9.48□□□□□ -0.89
NPAS3-204ENST00000546849 REXO1Q8N1G1 1221 aaKnown RBP9.48□□□□□ -0.89
NPAS3-204ENST00000546849 CRIM1Q9NZV1 1036 aa9.48□□□□□ -0.89
NPAS3-204ENST00000546849 TACC3Q9Y6A5 838 aa9.48□□□□□ -0.89
NPAS3-204ENST00000546849 FANCGO15287 622 aa9.47□□□□□ -0.89
NPAS3-204ENST00000546849 STK10O94804 968 aaKnown RBP9.47□□□□□ -0.89
NPAS3-204ENST00000546849 HCLS1P14317 486 aaPredicted RBP9.47□□□□□ -0.89
NPAS3-204ENST00000546849 RAB6AP20340 208 aa9.47□□□□□ -0.89
NPAS3-204ENST00000546849 RXRBP28702 533 aa9.47□□□□□ -0.89
NPAS3-204ENST00000546849 GRK4P32298 578 aa9.47□□□□□ -0.89
NPAS3-204ENST00000546849 SOX9P48436 509 aa9.47□□□□□ -0.89
NPAS3-204ENST00000546849 MBTPS1Q14703 1052 aa9.47□□□□□ -0.89
NPAS3-204ENST00000546849 TXNRD3Q86VQ6 643 aa9.47□□□□□ -0.89
NPAS3-204ENST00000546849 UTP4Q969X6 686 aaKnown RBP9.47□□□□□ -0.89
NPAS3-204ENST00000546849 FANCD2OSQ96PS1 177 aa9.47□□□□□ -0.89
NPAS3-204ENST00000546849 SRRTQ9BXP5 876 aaKnown RBP9.47□□□□□ -0.89
NPAS3-204ENST00000546849 PPT2Q9UMR5 302 aa9.47□□□□□ -0.89
NPAS3-204ENST00000546849 TIAF1O95411 115 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 NOS3P29474 1203 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 PREPP48147 710 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 ADGRE1Q14246 886 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 CCDC81Q6ZN84 652 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 CYFIP1Q7L576 1253 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 KCT2Q8NC54 265 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 RNF214Q8ND24 703 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 ZNF507Q8TCN5 953 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 GMLQ99445 158 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 PCDHGC5Q9Y5F6 944 aa9.46□□□□□ -0.9
NPAS3-204ENST00000546849 GFRA2O00451 464 aa9.45□□□□□ -0.9
NPAS3-204ENST00000546849 HTR3BO95264 441 aa9.45□□□□□ -0.9
NPAS3-204ENST00000546849 EIF6P56537 245 aaKnown RBP9.45□□□□□ -0.9
NPAS3-204ENST00000546849 TTLL4Q14679 1199 aa9.45□□□□□ -0.9
NPAS3-204ENST00000546849 MCF2L2Q86YR7 1114 aa9.45□□□□□ -0.9
NPAS3-204ENST00000546849 ANAPC16Q96DE5 110 aa9.45□□□□□ -0.9
NPAS3-204ENST00000546849 WNT10AQ9GZT5 417 aa9.45□□□□□ -0.9
NPAS3-204ENST00000546849 KLHL3Q9UH77 587 aa9.45□□□□□ -0.9
NPAS3-204ENST00000546849 POLR3KQ9Y2Y1 108 aaPredicted RBP9.45□□□□□ -0.9
NPAS3-204ENST00000546849 R3HCC1Q9Y3T6 440 aaKnown RBP9.45□□□□□ -0.9
NPAS3-204ENST00000546849 ACTL7BQ9Y614 415 aa9.45□□□□□ -0.9
NPAS3-204ENST00000546849 FGRP09769 529 aa9.44□□□□□ -0.9
NPAS3-204ENST00000546849 ITGB7P26010 798 aa9.44□□□□□ -0.9
NPAS3-204ENST00000546849 CLCQ05315 142 aa9.44□□□□□ -0.9
NPAS3-204ENST00000546849 UVSSAQ2YD98 709 aa9.44□□□□□ -0.9
NPAS3-204ENST00000546849 LRRFIP1Q32MZ4 808 aaKnown RBP9.44□□□□□ -0.9
NPAS3-204ENST00000546849 ZBTB37Q5TC79 503 aa9.44□□□□□ -0.9
NPAS3-204ENST00000546849 C2CD4AQ8NCU7 369 aaPredicted RBP9.44□□□□□ -0.9
NPAS3-204ENST00000546849 UBXN4Q92575 508 aa9.44□□□□□ -0.9
NPAS3-204ENST00000546849 DISC1Q9NRI5 854 aa9.44□□□□□ -0.9
NPAS3-204ENST00000546849 CORINQ9Y5Q5 1042 aa9.44□□□□□ -0.9
NPAS3-204ENST00000546849 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.43□□□□□ -0.9
NPAS3-204ENST00000546849 CHMP4BP1P59074 171 aa9.43□□□□□ -0.9
NPAS3-204ENST00000546849 Q6ZS46 218 aa9.43□□□□□ -0.9
NPAS3-204ENST00000546849 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.43□□□□□ -0.9
NPAS3-204ENST00000546849 SMYD4Q8IYR2 804 aaPredicted RBP9.43□□□□□ -0.9
NPAS3-204ENST00000546849 KCNF1Q9H3M0 494 aa9.43□□□□□ -0.9
NPAS3-204ENST00000546849 FAM105AQ9NUU6 356 aa9.43□□□□□ -0.9
NPAS3-204ENST00000546849 REV1Q9UBZ9 1251 aa9.43□□□□□ -0.9
NPAS3-204ENST00000546849 ZNRF3Q9ULT6 936 aa9.43□□□□□ -0.9
NPAS3-204ENST00000546849 DAGLAQ9Y4D2 1042 aa9.43□□□□□ -0.9
NPAS3-204ENST00000546849 YARSP54577 528 aaKnown RBP9.42□□□□□ -0.9
NPAS3-204ENST00000546849 HID1Q8IV36 788 aa9.42□□□□□ -0.9
NPAS3-204ENST00000546849 FAM13CQ8NE31 585 aa9.42□□□□□ -0.9
NPAS3-204ENST00000546849 EHMT1Q9H9B1 1298 aa9.42□□□□□ -0.9
NPAS3-204ENST00000546849 ADAM30Q9UKF2 790 aa9.42□□□□□ -0.9
NPAS3-204ENST00000546849 MRVI1Q9Y6F6 885 aa9.42□□□□□ -0.9
NPAS3-204ENST00000546849 DOC2BQ14184 412 aa9.41□□□□□ -0.9
NPAS3-204ENST00000546849 MAP7Q14244 749 aa9.41□□□□□ -0.9
NPAS3-204ENST00000546849 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.41□□□□□ -0.9
NPAS3-204ENST00000546849 CKAP2LQ8IYA6 745 aa9.41□□□□□ -0.9
NPAS3-204ENST00000546849 Q8N3U1 123 aa9.41□□□□□ -0.9
NPAS3-204ENST00000546849 OR6P1Q8NGX9 317 aa9.41□□□□□ -0.9
NPAS3-204ENST00000546849 DHX38Q92620 1227 aaKnown RBP9.41□□□□□ -0.9
NPAS3-204ENST00000546849 HIRIP3Q9BW71 556 aaPredicted RBP9.41□□□□□ -0.9
NPAS3-204ENST00000546849 ATE1O95260 518 aa9.4□□□□□ -0.9
NPAS3-204ENST00000546849 BMP3P12645 472 aa9.4□□□□□ -0.9
NPAS3-204ENST00000546849 ISL2Q96A47 359 aa9.4□□□□□ -0.9
NPAS3-204ENST00000546849 ARMC5Q96C12 935 aa9.4□□□□□ -0.9
NPAS3-204ENST00000546849 FAM46AQ96IP4 442 aaKnown RBP9.4□□□□□ -0.9
NPAS3-204ENST00000546849 MEGF10Q96KG7 1140 aa9.4□□□□□ -0.9
NPAS3-204ENST00000546849 UBL7Q96S82 380 aaPredicted RBP9.4□□□□□ -0.9
NPAS3-204ENST00000546849 GMIPQ9P107 970 aa9.4□□□□□ -0.9
NPAS3-204ENST00000546849 PCOLCE2Q9UKZ9 415 aa9.4□□□□□ -0.9
NPAS3-204ENST00000546849 PRR36Q9H6K5 1346 aa9.39□□□□□ -0.91
NPAS3-204ENST00000546849 DHX15O43143 795 aaKnown RBP9.39□□□□□ -0.91
NPAS3-204ENST00000546849 NEFMP07197 916 aa9.39□□□□□ -0.91
NPAS3-204ENST00000546849 GATA4P43694 442 aa9.39□□□□□ -0.91
NPAS3-204ENST00000546849 SGO2Q562F6 1265 aa9.39□□□□□ -0.91
NPAS3-204ENST00000546849 PHACTR4Q8IZ21 702 aa9.39□□□□□ -0.91
NPAS3-204ENST00000546849 FBLIM1Q8WUP2 373 aa9.39□□□□□ -0.91
NPAS3-204ENST00000546849 TMEM40Q8WWA1 233 aa9.39□□□□□ -0.91
NPAS3-204ENST00000546849 MYRFLQ96LU7 910 aa9.39□□□□□ -0.91
NPAS3-204ENST00000546849 RAG1P15918 1043 aa9.38□□□□□ -0.91
NPAS3-204ENST00000546849 MAP4P27816 1152 aaKnown RBP9.38□□□□□ -0.91
NPAS3-204ENST00000546849 RING1Q06587 406 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms