RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 TNNI2P48788 182 aa13.71□□□□□ -0.22
NPC1L1-204ENST00000546276 CNNM4Q6P4Q7 775 aa13.71□□□□□ -0.22
NPC1L1-204ENST00000546276 SIRT1Q96EB6 747 aa13.71□□□□□ -0.22
NPC1L1-204ENST00000546276 PDLIM2Q96JY6 352 aa13.71□□□□□ -0.22
NPC1L1-204ENST00000546276 KCNQ3O43525 872 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 GBP6Q6ZN66 633 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 IFT20Q8IY31 132 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 RPGRIP1Q96KN7 1286 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 TTC14Q96N46 770 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 FANCLQ9NW38 375 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 ABCA8O94911 1581 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 C11orf57Q6ZUT1 292 aaPredicted RBP13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 FCHSD1Q86WN1 690 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 NBPF5PQ86XG9 351 aaPredicted RBP13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 NELFBQ8WX92 580 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 MYO5CQ9NQX4 1742 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 TLDC2A0PJX2 215 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 UBLCP1Q8WVY7 318 aaPredicted RBP13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 PPFIA1Q13136 1202 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 LETM2Q2VYF4 491 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 SCLT1Q96NL6 688 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 NOX5Q96PH1 765 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 PCDH11XQ9BZA7 1347 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 PCDH11YQ9BZA8 1340 aa13.7□□□□□ -0.22
NPC1L1-204ENST00000546276 TRAF5O00463 557 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 CCDC174Q6PII3 467 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 TRIML1Q8N9V2 468 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 SAMD15Q9P1V8 674 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 MTRF1LQ9UGC7 380 aaKnown RBP13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 ATP7BP35670 1465 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 CTDSPL2Q05D32 466 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 PPP4R3AQ6IN85 833 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 NOSTRINQ8IVI9 506 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 CCDC26Q8TAB7 109 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 ZNF496Q96IT1 587 aaPredicted RBP13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 UGGT1Q9NYU2 1555 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 HPDP32754 393 aaPredicted RBP13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 RAPGEF1Q13905 1077 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 CABLES1Q8TDN4 633 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 CLIC4Q9Y696 253 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 SND1Q7KZF4 910 aaKnown RBP eCLIP13.69□□□□□ -0.224e-8■■□□□ 12.2
NPC1L1-204ENST00000546276 NLRP3Q96P20 1036 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 SAR1BQ9Y6B6 198 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 ZNF532Q9HCE3 1301 aa13.69□□□□□ -0.22
NPC1L1-204ENST00000546276 LARGE1O95461 756 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 C6orf163Q5TEZ5 329 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 FBXO18Q8NFZ0 1043 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 FBF1Q8TES7 1133 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 CFAP65Q6ZU64 1925 aaKnown RBP13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 ATP8B1O43520 1251 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 STX10O60499 249 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 RABGGTAQ92696 567 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 PAIP2Q9BPZ3 127 aaKnown RBP13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 RCOR1Q9UKL0 485 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 ZMYM6O95789 1325 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 SMIM23A6NLE4 172 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 MAGEA1P43355 309 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 SPTLC3Q9NUV7 552 aa13.68□□□□□ -0.22
NPC1L1-204ENST00000546276 ATP6V1AP38606 617 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 CCDC65Q8IXS2 484 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 NSUN7Q8NE18 718 aaKnown RBP13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 STAMQ92783 540 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 PAK2Q13177 524 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 DPCR1Q3MIW9 517 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 OR8K1Q8NGG5 319 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 DENND2AQ9ULE3 1009 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 SAMM50Q9Y512 469 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 IKBKBO14920 756 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 HS2ST1Q7LGA3 356 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 LRRC45Q96CN5 670 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 COPRSQ9NQ92 184 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 IKBKGQ9Y6K9 419 aa13.67□□□□□ -0.22
NPC1L1-204ENST00000546276 ADD1P35611 737 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 ARHGAP25P42331 645 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 CCDC6Q16204 474 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 USP37Q86T82 979 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 LPIN2Q92539 896 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 BLZF1Q9H2G9 400 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 CYP21A2P08686 494 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 ZNF827Q17R98 1081 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 TRMT1LQ7Z2T5 733 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 RABEP2Q9H5N1 569 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 PRDM1O75626 825 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 A1BGP04217 495 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 PARP1P09874 1014 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 TRAF1Q13077 416 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 SLC9C1Q4G0N8 1177 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 POLR3EQ9NVU0 708 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 VPS54Q9P1Q0 977 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms