RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 DNAJC18Q9H819 358 aa20.21■□□□□ 0.83
CADM1-220ENST00000546000 PGAP2Q9UHJ9 254 aa20.21■□□□□ 0.83
CADM1-220ENST00000546000 ANAPC4Q9UJX5 808 aa20.21■□□□□ 0.83
CADM1-220ENST00000546000 ZKSCAN1P17029 563 aaPredicted RBP20.2■□□□□ 0.82
CADM1-220ENST00000546000 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
CADM1-220ENST00000546000 FKBP1CQ5VVH2 108 aa20.2■□□□□ 0.82
CADM1-220ENST00000546000 FAM83AQ86UY5 434 aa20.2■□□□□ 0.82
CADM1-220ENST00000546000 APOBEC3FQ8IUX4 373 aaKnown RBP20.2■□□□□ 0.82
CADM1-220ENST00000546000 STAG1Q8WVM7 1258 aa20.2■□□□□ 0.82
CADM1-220ENST00000546000 TCEANC2Q96MN5 208 aa20.2■□□□□ 0.82
CADM1-220ENST00000546000 CSRNP1Q96S65 589 aa20.2■□□□□ 0.82
CADM1-220ENST00000546000 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.2■□□□□ 0.82
CADM1-220ENST00000546000 B4E1Z4 1266 aa20.19■□□□□ 0.82
CADM1-220ENST00000546000 ANAPC15P60006 121 aa20.19■□□□□ 0.82
CADM1-220ENST00000546000 AKNAD1Q5T1N1 836 aa20.19■□□□□ 0.82
CADM1-220ENST00000546000 AMOTL1Q8IY63 956 aa20.19■□□□□ 0.82
CADM1-220ENST00000546000 TEPSINQ96N21 525 aa20.19■□□□□ 0.82
CADM1-220ENST00000546000 DEFB129Q9H1M3 183 aa20.19■□□□□ 0.82
CADM1-220ENST00000546000 TOMM22Q9NS69 142 aa20.19■□□□□ 0.82
CADM1-220ENST00000546000 SSC5DA1L4H1 1573 aa20.19■□□□□ 0.82
CADM1-220ENST00000546000 HLA-DOAP06340 250 aa20.18■□□□□ 0.82
CADM1-220ENST00000546000 CASTP20810 708 aaKnown RBP20.18■□□□□ 0.82
CADM1-220ENST00000546000 TNNI2P48788 182 aa20.18■□□□□ 0.82
CADM1-220ENST00000546000 GABPAQ06546 454 aa20.18■□□□□ 0.82
CADM1-220ENST00000546000 SHROOM1Q2M3G4 852 aaPredicted RBP20.18■□□□□ 0.82
CADM1-220ENST00000546000 TSGA10IPQ3SY00 556 aa20.18■□□□□ 0.82
CADM1-220ENST00000546000 C16orf86Q6ZW13 317 aa20.18■□□□□ 0.82
CADM1-220ENST00000546000 CHST3Q7LGC8 479 aa20.18■□□□□ 0.82
CADM1-220ENST00000546000 IL17RAQ96F46 866 aa20.18■□□□□ 0.82
CADM1-220ENST00000546000 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
CADM1-220ENST00000546000 POLR2AP24928 1970 aaKnown RBP20.17■□□□□ 0.82
CADM1-220ENST00000546000 TNFAIP1Q13829 316 aa20.17■□□□□ 0.82
CADM1-220ENST00000546000 CYB5R4Q7L1T6 521 aa20.17■□□□□ 0.82
CADM1-220ENST00000546000 TTC6Q86TZ1 520 aa20.17■□□□□ 0.82
CADM1-220ENST00000546000 MB21D2Q8IYB1 491 aaPredicted RBP20.17■□□□□ 0.82
CADM1-220ENST00000546000 LRRC2Q9BYS8 371 aa20.17■□□□□ 0.82
CADM1-220ENST00000546000 PITPNM2Q9BZ72 1349 aa20.17■□□□□ 0.82
CADM1-220ENST00000546000 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
CADM1-220ENST00000546000 CDK8P49336 464 aa20.16■□□□□ 0.82
CADM1-220ENST00000546000 NBPF12Q5TAG4 269 aaPredicted RBP20.16■□□□□ 0.82
CADM1-220ENST00000546000 IFFO2Q5TF58 517 aa20.16■□□□□ 0.82
CADM1-220ENST00000546000 MFSD6Q6ZSS7 791 aa20.16■□□□□ 0.82
CADM1-220ENST00000546000 NEK1Q96PY6 1258 aa20.16■□□□□ 0.82
CADM1-220ENST00000546000 GLIS2Q9BZE0 524 aaPredicted RBP20.16■□□□□ 0.82
CADM1-220ENST00000546000 DHX36Q9H2U1 1008 aaKnown RBP20.16■□□□□ 0.82
CADM1-220ENST00000546000 SERPINB13Q9UIV8 391 aa20.16■□□□□ 0.82
CADM1-220ENST00000546000 FZD1Q9UP38 647 aa20.16■□□□□ 0.82
CADM1-220ENST00000546000 KDM4AO75164 1064 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 RASA1P20936 1047 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 SHMT1P34896 483 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 ANTXR2P58335 489 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 KRT32Q14532 448 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 RRP1BQ14684 758 aaKnown RBP20.15■□□□□ 0.82
CADM1-220ENST00000546000 FAM47AQ5JRC9 791 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 MIGA2Q7L4E1 593 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 USP48Q86UV5 1035 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 CRACR2BQ8N4Y2 399 aaPredicted RBP20.15■□□□□ 0.82
CADM1-220ENST00000546000 DCPSQ96C86 337 aaKnown RBP20.15■□□□□ 0.82
CADM1-220ENST00000546000 EHD4Q9H223 541 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 GPHNQ9NQX3 736 aaPredicted RBP20.15■□□□□ 0.82
CADM1-220ENST00000546000 PI4KBQ9UBF8 816 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 CLEC11AQ9Y240 323 aa20.15■□□□□ 0.82
CADM1-220ENST00000546000 CD2BP2O95400 341 aaKnown RBP20.14■□□□□ 0.81
CADM1-220ENST00000546000 SLC3A2P08195 630 aaKnown RBP20.14■□□□□ 0.81
CADM1-220ENST00000546000 MAP1SQ66K74 1059 aaPredicted RBP20.14■□□□□ 0.81
CADM1-220ENST00000546000 BLOC1S2Q6QNY1 142 aa20.14■□□□□ 0.81
CADM1-220ENST00000546000 KRT26Q7Z3Y9 468 aa20.14■□□□□ 0.81
CADM1-220ENST00000546000 RALYLQ86SE5 291 aaKnown RBP20.14■□□□□ 0.81
CADM1-220ENST00000546000 NCOA7Q8NI08 942 aa20.14■□□□□ 0.81
CADM1-220ENST00000546000 RNF41Q9H4P4 317 aaPredicted RBP20.14■□□□□ 0.81
CADM1-220ENST00000546000 ZSWIM6Q9HCJ5 1215 aa20.14■□□□□ 0.81
CADM1-220ENST00000546000 MYH8P13535 1937 aa20.14■□□□□ 0.81
CADM1-220ENST00000546000 ORC4O43929 436 aa20.13■□□□□ 0.81
CADM1-220ENST00000546000 RANBP6O60518 1105 aaKnown RBP20.13■□□□□ 0.81
CADM1-220ENST00000546000 FGRP09769 529 aa20.13■□□□□ 0.81
CADM1-220ENST00000546000 RPS6KB1P23443 525 aa20.13■□□□□ 0.81
CADM1-220ENST00000546000 FMR1Q06787 632 aaKnown RBP eCLIP20.13■□□□□ 0.81
CADM1-220ENST00000546000 PDE4BQ07343 736 aa20.13■□□□□ 0.81
CADM1-220ENST00000546000 RABEP1Q15276 862 aa20.13■□□□□ 0.81
CADM1-220ENST00000546000 PNMA8AQ86V59 439 aaPredicted RBP20.13■□□□□ 0.81
CADM1-220ENST00000546000 SULF1Q8IWU6 871 aa20.13■□□□□ 0.81
CADM1-220ENST00000546000 ZKSCAN3Q9BRR0 538 aa20.13■□□□□ 0.81
CADM1-220ENST00000546000 RBM19Q9Y4C8 960 aaKnown RBP20.13■□□□□ 0.81
CADM1-220ENST00000546000 PRC1O43663 620 aa20.12■□□□□ 0.81
CADM1-220ENST00000546000 AKR1B1P15121 316 aa20.12■□□□□ 0.81
CADM1-220ENST00000546000 NEK4P51957 841 aa20.12■□□□□ 0.81
CADM1-220ENST00000546000 TRDNQ13061 729 aa20.12■□□□□ 0.81
CADM1-220ENST00000546000 NOL8Q76FK4 1167 aaKnown RBP20.12■□□□□ 0.81
CADM1-220ENST00000546000 RUFY3Q7L099 469 aa20.12■□□□□ 0.81
CADM1-220ENST00000546000 CLEC10AQ8IUN9 316 aa20.12■□□□□ 0.81
CADM1-220ENST00000546000 ZC3H15Q8WU90 426 aaKnown RBP20.12■□□□□ 0.81
CADM1-220ENST00000546000 LARP6Q9BRS8 491 aaKnown RBP20.12■□□□□ 0.81
CADM1-220ENST00000546000 TRIM34Q9BYJ4 488 aa20.12■□□□□ 0.81
CADM1-220ENST00000546000 TM6SF1Q9BZW5 370 aa20.12■□□□□ 0.81
CADM1-220ENST00000546000 MKNK2Q9HBH9 465 aa20.12■□□□□ 0.81
CADM1-220ENST00000546000 TRAF5O00463 557 aa20.11■□□□□ 0.81
CADM1-220ENST00000546000 NMT2O60551 498 aa20.11■□□□□ 0.81
CADM1-220ENST00000546000 GDF11O95390 407 aa20.11■□□□□ 0.81
CADM1-220ENST00000546000 HSPA6P17066 643 aa20.11■□□□□ 0.81
CADM1-220ENST00000546000 PSMA5P28066 241 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms