RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 TXNRD2Q9NNW7 524 aa19.46■□□□□ 0.71
CLSTN3-216ENST00000545663 MORF4L1Q9UBU8 362 aa19.46■□□□□ 0.71
CLSTN3-216ENST00000545663 MROH5Q6ZUA9 1318 aa19.46■□□□□ 0.71
CLSTN3-216ENST00000545663 PDE3AQ14432 1141 aa19.45■□□□□ 0.7
CLSTN3-216ENST00000545663 ZSCAN29Q8IWY8 852 aaPredicted RBP19.45■□□□□ 0.7
CLSTN3-216ENST00000545663 PROCA1Q8NCQ7 364 aaPredicted RBP19.45■□□□□ 0.7
CLSTN3-216ENST00000545663 ATXN2LQ8WWM7 1075 aaKnown RBP19.45■□□□□ 0.7
CLSTN3-216ENST00000545663 USP6NLQ92738 828 aa19.45■□□□□ 0.7
CLSTN3-216ENST00000545663 NECAB3Q96P71 396 aaPredicted RBP19.45■□□□□ 0.7
CLSTN3-216ENST00000545663 SPINK5Q9NQ38 1064 aaPredicted RBP19.45■□□□□ 0.7
CLSTN3-216ENST00000545663 SYNGAP1Q96PV0 1343 aa19.45■□□□□ 0.7
CLSTN3-216ENST00000545663 FAM196BA6NMK8 535 aa19.44■□□□□ 0.7
CLSTN3-216ENST00000545663 PRDX5P30044 214 aa19.44■□□□□ 0.7
CLSTN3-216ENST00000545663 EPHB4P54760 987 aa19.44■□□□□ 0.7
CLSTN3-216ENST00000545663 TWISTNBQ3B726 338 aaPredicted RBP19.44■□□□□ 0.7
CLSTN3-216ENST00000545663 METTL24Q5JXM2 366 aa19.44■□□□□ 0.7
CLSTN3-216ENST00000545663 SH3RF1Q7Z6J0 888 aa19.44■□□□□ 0.7
CLSTN3-216ENST00000545663 PIEZO1Q92508 2521 aa19.44■□□□□ 0.7
CLSTN3-216ENST00000545663 GRM8O00222 908 aa19.43■□□□□ 0.7
CLSTN3-216ENST00000545663 POTEEQ6S8J3 1075 aa19.43■□□□□ 0.7
CLSTN3-216ENST00000545663 VGLL2Q8N8G2 317 aa19.43■□□□□ 0.7
CLSTN3-216ENST00000545663 KAZALD1Q96I82 304 aa19.43■□□□□ 0.7
CLSTN3-216ENST00000545663 P2RX7Q99572 595 aaKnown RBP19.43■□□□□ 0.7
CLSTN3-216ENST00000545663 TRIM43BA6NCK2 446 aa19.42■□□□□ 0.7
CLSTN3-216ENST00000545663 PDE8BO95263 885 aa19.42■□□□□ 0.7
CLSTN3-216ENST00000545663 RALBP1Q15311 655 aa19.42■□□□□ 0.7
CLSTN3-216ENST00000545663 Q3C1V9 767 aa19.42■□□□□ 0.7
CLSTN3-216ENST00000545663 TRMT44Q8IYL2 757 aaKnown RBP19.42■□□□□ 0.7
CLSTN3-216ENST00000545663 SOCS4Q8WXH5 440 aa19.42■□□□□ 0.7
CLSTN3-216ENST00000545663 TRIM43Q96BQ3 446 aaPredicted RBP19.42■□□□□ 0.7
CLSTN3-216ENST00000545663 DDX4Q9NQI0 724 aaKnown RBP19.42■□□□□ 0.7
CLSTN3-216ENST00000545663 DOCK1Q14185 1865 aa19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 ENTPD3O75355 529 aa19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 ZNF280CQ8ND82 737 aa19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 GPRC5AQ8NFJ5 357 aa19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 WDR66Q8TBY9 1149 aa19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 RNPC3Q96LT9 517 aaKnown RBP19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 IDI2Q9BXS1 227 aa19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 PORCNQ9H237 461 aa19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 FLRT1Q9NZU1 646 aa19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 THEGQ9P2T0 379 aa19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 DOCK2Q92608 1830 aa19.41■□□□□ 0.7
CLSTN3-216ENST00000545663 DNAJB2P25686 324 aa19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 ITGB8P26012 769 aa19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 MRPS5P82675 430 aaKnown RBP19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 PABPC4Q13310 644 aaKnown RBP eCLIP19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 CCDC85BQ15834 202 aaPredicted RBP19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 TRIM60Q495X7 471 aa19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 MORN1Q5T089 497 aa19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 GJC2Q5T442 439 aaPredicted RBP19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 SLC39A5Q6ZMH5 540 aa19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 SUCLG2Q96I99 432 aa19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 ZNF576Q9H609 170 aa19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 RBPJLQ9UBG7 517 aa19.4■□□□□ 0.7
CLSTN3-216ENST00000545663 CNGA1P29973 690 aa19.39■□□□□ 0.69
CLSTN3-216ENST00000545663 RGS2P41220 211 aa19.39■□□□□ 0.69
CLSTN3-216ENST00000545663 RRP1BQ14684 758 aaKnown RBP19.39■□□□□ 0.69
CLSTN3-216ENST00000545663 GPR142Q7Z601 462 aa19.39■□□□□ 0.69
CLSTN3-216ENST00000545663 PDLIM7Q9NR12 457 aa19.39■□□□□ 0.69
CLSTN3-216ENST00000545663 DDX20Q9UHI6 824 aaKnown RBP19.39■□□□□ 0.69
CLSTN3-216ENST00000545663 LOC285556D6RIA3 1793 aa19.38■□□□□ 0.69
CLSTN3-216ENST00000545663 DNM1LO00429 736 aa19.38■□□□□ 0.69
CLSTN3-216ENST00000545663 PICALMQ13492 652 aa19.38■□□□□ 0.69
CLSTN3-216ENST00000545663 KLHDC4Q8TBB5 520 aa19.38■□□□□ 0.69
CLSTN3-216ENST00000545663 LPAR1Q92633 364 aa19.38■□□□□ 0.69
CLSTN3-216ENST00000545663 C1QTNF1Q9BXJ1 281 aa19.38■□□□□ 0.69
CLSTN3-216ENST00000545663 C9orf78Q9NZ63 289 aaPredicted RBP19.38■□□□□ 0.69
CLSTN3-216ENST00000545663 NDUFB9Q9Y6M9 179 aa19.38■□□□□ 0.69
CLSTN3-216ENST00000545663 FRMPD3Q5JV73 1810 aa19.37■□□□□ 0.69
CLSTN3-216ENST00000545663 RFX7Q2KHR2 1363 aa19.37■□□□□ 0.69
CLSTN3-216ENST00000545663 LDHBP07195 334 aaKnown RBP19.37■□□□□ 0.69
CLSTN3-216ENST00000545663 FGFR2P21802 821 aa19.37■□□□□ 0.69
CLSTN3-216ENST00000545663 HERVK_113P62684 666 aa19.37■□□□□ 0.69
CLSTN3-216ENST00000545663 IRX3P78415 501 aaPredicted RBP19.37■□□□□ 0.69
CLSTN3-216ENST00000545663 TRPV1Q8NER1 839 aa19.37■□□□□ 0.69
CLSTN3-216ENST00000545663 APBA2Q99767 749 aa19.37■□□□□ 0.69
CLSTN3-216ENST00000545663 LRFN3Q9BTN0 628 aa19.37■□□□□ 0.69
CLSTN3-216ENST00000545663 CHD7Q9P2D1 2997 aa19.36■□□□□ 0.69
CLSTN3-216ENST00000545663 MAPK4P31152 587 aa19.36■□□□□ 0.69
CLSTN3-216ENST00000545663 SH3D19Q5HYK7 790 aa19.36■□□□□ 0.69
CLSTN3-216ENST00000545663 PLEKHH3Q7Z736 793 aa19.36■□□□□ 0.69
CLSTN3-216ENST00000545663 PRDM12Q9H4Q4 367 aa19.36■□□□□ 0.69
CLSTN3-216ENST00000545663 ALYREFQ86V81 257 aaKnown RBP19.35■□□□□ 0.69
CLSTN3-216ENST00000545663 EPHX3Q9H6B9 360 aa19.35■□□□□ 0.69
CLSTN3-216ENST00000545663 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.35■□□□□ 0.693e-6■■■□□ 18.9
CLSTN3-216ENST00000545663 ARIH1Q9Y4X5 557 aaPredicted RBP19.35■□□□□ 0.69
CLSTN3-216ENST00000545663 MYBBP1AQ9BQG0 1328 aaKnown RBP19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 IFIT1P09914 478 aaKnown RBP19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 CYP2C19P33261 490 aa19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 ERVK-9P63128 1117 aa19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 ERVK-24P63145 666 aa19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 ADGRE1Q14246 886 aa19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 PUM3Q15397 648 aaKnown RBP19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 MFSD14CQ5VZR4 134 aa19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 ANO1Q5XXA6 986 aa19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 CCAR1Q8IX12 1150 aaKnown RBP19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 TIFAQ96CG3 184 aa19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 EDC3Q96F86 508 aaKnown RBP19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 PAGR1Q9BTK6 254 aa19.34■□□□□ 0.69
CLSTN3-216ENST00000545663 HCN4Q9Y3Q4 1203 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms