RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ERC2O15083 957 aa19.01■□□□□ 0.63
CCDC78-216ENST00000544996 CRNKL1Q9BZJ0 848 aaKnown RBP19.01■□□□□ 0.63
CCDC78-216ENST00000544996 SAP30BPQ9UHR5 308 aaKnown RBP19.01■□□□□ 0.63
CCDC78-216ENST00000544996 TCRBV5S4A2TA0A5A2 114 aa19■□□□□ 0.63
CCDC78-216ENST00000544996 FAM196BA6NMK8 535 aa19■□□□□ 0.63
CCDC78-216ENST00000544996 SLURP2P0DP57 97 aa19■□□□□ 0.63
CCDC78-216ENST00000544996 PTPRAP18433 802 aa19■□□□□ 0.63
CCDC78-216ENST00000544996 ADD2P35612 726 aa19■□□□□ 0.63
CCDC78-216ENST00000544996 UBE3CQ15386 1083 aa19■□□□□ 0.63
CCDC78-216ENST00000544996 KCNH4Q9UQ05 1017 aa19■□□□□ 0.63
CCDC78-216ENST00000544996 DOCK2Q92608 1830 aa19■□□□□ 0.63
CCDC78-216ENST00000544996 CXCL11O14625 94 aa18.99■□□□□ 0.63
CCDC78-216ENST00000544996 FKTNO75072 461 aa18.99■□□□□ 0.63
CCDC78-216ENST00000544996 CRHR2Q13324 411 aa18.99■□□□□ 0.63
CCDC78-216ENST00000544996 TSHZ3Q63HK5 1081 aa18.99■□□□□ 0.63
CCDC78-216ENST00000544996 ZNF296Q8WUU4 475 aaPredicted RBP18.99■□□□□ 0.63
CCDC78-216ENST00000544996 ZCCHC17Q9NP64 241 aaKnown RBP18.99■□□□□ 0.63
CCDC78-216ENST00000544996 GLRX3O76003 335 aaKnown RBP18.98■□□□□ 0.63
CCDC78-216ENST00000544996 MX1P20591 662 aa18.98■□□□□ 0.63
CCDC78-216ENST00000544996 DGKZQ13574 1117 aa18.98■□□□□ 0.63
CCDC78-216ENST00000544996 TAF1CQ15572 869 aaPredicted RBP18.98■□□□□ 0.63
CCDC78-216ENST00000544996 TTC6Q86TZ1 520 aa18.98■□□□□ 0.63
CCDC78-216ENST00000544996 METTL16Q86W50 562 aaKnown RBP18.98■□□□□ 0.63
CCDC78-216ENST00000544996 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
CCDC78-216ENST00000544996 KBTBD3Q8NAB2 608 aa18.98■□□□□ 0.63
CCDC78-216ENST00000544996 R3HDMLQ9H3Y0 253 aa18.98■□□□□ 0.63
CCDC78-216ENST00000544996 ZFYVE28Q9HCC9 887 aa18.98■□□□□ 0.63
CCDC78-216ENST00000544996 MYO5AQ9Y4I1 1855 aaKnown RBP18.98■□□□□ 0.63
CCDC78-216ENST00000544996 BTBD19C9JJ37 291 aa18.97■□□□□ 0.63
CCDC78-216ENST00000544996 POLR3DP05423 398 aaPredicted RBP18.97■□□□□ 0.63
CCDC78-216ENST00000544996 CAP2P40123 477 aa18.97■□□□□ 0.63
CCDC78-216ENST00000544996 SLC4A8Q2Y0W8 1093 aa18.97■□□□□ 0.63
CCDC78-216ENST00000544996 LRRFIP1Q32MZ4 808 aaKnown RBP18.97■□□□□ 0.63
CCDC78-216ENST00000544996 ARMT1Q9H993 441 aa18.97■□□□□ 0.63
CCDC78-216ENST00000544996 AFG3L2Q9Y4W6 797 aa18.97■□□□□ 0.63
CCDC78-216ENST00000544996 MBD4O95243 580 aa18.96■□□□□ 0.63
CCDC78-216ENST00000544996 FASTKD5Q7L8L6 764 aaKnown RBP18.96■□□□□ 0.63
CCDC78-216ENST00000544996 CTU1Q7Z7A3 348 aaKnown RBP18.96■□□□□ 0.63
CCDC78-216ENST00000544996 LCORLQ8N3X6 602 aa18.96■□□□□ 0.63
CCDC78-216ENST00000544996 OTUD7AQ8TE49 926 aaPredicted RBP18.96■□□□□ 0.63
CCDC78-216ENST00000544996 TBC1D2Q9BYX2 928 aa18.96■□□□□ 0.63
CCDC78-216ENST00000544996 SERPINB13Q9UIV8 391 aa18.96■□□□□ 0.63
CCDC78-216ENST00000544996 ZFYP08048 801 aaPredicted RBP18.95■□□□□ 0.62
CCDC78-216ENST00000544996 ASNSP08243 561 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 SLFNL1Q499Z3 407 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 ANKRD23Q86SG2 305 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 SMC5Q8IY18 1101 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 PI4K2BQ8TCG2 481 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 SDR42E1Q8WUS8 393 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 DDRGK1Q96HY6 314 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 MCOLN1Q9GZU1 580 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 EHD4Q9H223 541 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 GINM1Q9NU53 330 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 MCM9Q9NXL9 1143 aa18.95■□□□□ 0.62
CCDC78-216ENST00000544996 LAMB1P07942 1786 aa18.94■□□□□ 0.62
CCDC78-216ENST00000544996 A0A0G2JLL6 359 aaPredicted RBP18.94■□□□□ 0.62
CCDC78-216ENST00000544996 TRIM75PA6NK02 468 aa18.94■□□□□ 0.62
CCDC78-216ENST00000544996 USP17L5A8MUK1 530 aa18.94■□□□□ 0.62
CCDC78-216ENST00000544996 PRRT2Q7Z6L0 340 aaPredicted RBP18.94■□□□□ 0.62
CCDC78-216ENST00000544996 ABHD8Q96I13 439 aa18.94■□□□□ 0.62
CCDC78-216ENST00000544996 DNAJC18Q9H819 358 aa18.94■□□□□ 0.62
CCDC78-216ENST00000544996 AS3MTQ9HBK9 375 aa18.94■□□□□ 0.62
CCDC78-216ENST00000544996 DCP1AQ9NPI6 582 aaPredicted RBP18.94■□□□□ 0.62
CCDC78-216ENST00000544996 ATP8A2Q9NTI2 1148 aa18.94■□□□□ 0.62
CCDC78-216ENST00000544996 CASP8AP2Q9UKL3 1982 aa18.93■□□□□ 0.62
CCDC78-216ENST00000544996 PDHXO00330 501 aa18.93■□□□□ 0.62
CCDC78-216ENST00000544996 RNF113AO15541 343 aaKnown RBP18.93■□□□□ 0.62
CCDC78-216ENST00000544996 CAPN15O75808 1086 aa18.93■□□□□ 0.62
CCDC78-216ENST00000544996 RRP1BQ14684 758 aaKnown RBP18.93■□□□□ 0.62
CCDC78-216ENST00000544996 B4GALNT3Q6L9W6 998 aa18.93■□□□□ 0.62
CCDC78-216ENST00000544996 AMOTL1Q8IY63 956 aa18.93■□□□□ 0.62
CCDC78-216ENST00000544996 ZNF280CQ8ND82 737 aa18.93■□□□□ 0.62
CCDC78-216ENST00000544996 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.93■□□□□ 0.62
CCDC78-216ENST00000544996 IGHDP01880 384 aa18.92■□□□□ 0.62
CCDC78-216ENST00000544996 CHGBP05060 677 aa18.92■□□□□ 0.62
CCDC78-216ENST00000544996 SP3Q02447 781 aa18.92■□□□□ 0.62
CCDC78-216ENST00000544996 SPP2Q13103 211 aa18.92■□□□□ 0.62
CCDC78-216ENST00000544996 PKN2Q16513 984 aaKnown RBP18.92■□□□□ 0.62
CCDC78-216ENST00000544996 GADL1Q6ZQY3 521 aa18.92■□□□□ 0.62
CCDC78-216ENST00000544996 CCDC84Q86UT8 332 aaPredicted RBP18.92■□□□□ 0.62
CCDC78-216ENST00000544996 APPBP2Q92624 585 aa18.92■□□□□ 0.62
CCDC78-216ENST00000544996 ERO1AQ96HE7 468 aa18.92■□□□□ 0.62
CCDC78-216ENST00000544996 LNPKQ9C0E8 428 aa18.92■□□□□ 0.62
CCDC78-216ENST00000544996 PUS7LQ9H0K6 701 aaKnown RBP18.92■□□□□ 0.62
CCDC78-216ENST00000544996 STAP2Q9UGK3 403 aa18.92■□□□□ 0.62
CCDC78-216ENST00000544996 SLC4A4Q9Y6R1 1079 aa18.92■□□□□ 0.62
CCDC78-216ENST00000544996 PRKAB2O43741 272 aa18.91■□□□□ 0.62
CCDC78-216ENST00000544996 TLR2O60603 784 aa18.91■□□□□ 0.62
CCDC78-216ENST00000544996 PLCD1P51178 756 aa18.91■□□□□ 0.62
CCDC78-216ENST00000544996 PDE1AP54750 535 aa18.91■□□□□ 0.62
CCDC78-216ENST00000544996 IRX6P78412 446 aaPredicted RBP18.91■□□□□ 0.62
CCDC78-216ENST00000544996 MOGSQ13724 837 aa18.91■□□□□ 0.62
CCDC78-216ENST00000544996 TATDN1Q6P1N9 297 aa18.91■□□□□ 0.62
CCDC78-216ENST00000544996 PARK7Q99497 189 aaKnown RBP18.91■□□□□ 0.62
CCDC78-216ENST00000544996 FSD1Q9BTV5 496 aa18.91■□□□□ 0.62
CCDC78-216ENST00000544996 SALL3Q9BXA9 1300 aa18.91■□□□□ 0.62
CCDC78-216ENST00000544996 FOCADQ5VW36 1801 aa18.9■□□□□ 0.62
CCDC78-216ENST00000544996 GDF11O95390 407 aa18.9■□□□□ 0.62
CCDC78-216ENST00000544996 ARHGEF6Q15052 776 aa18.9■□□□□ 0.62
CCDC78-216ENST00000544996 CERKLQ49MI3 558 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms