RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 LRRC2Q9BYS8 371 aa10.13□□□□□ -0.79
NECAP1-207ENST00000544891 DNAJC5Q9H3Z4 198 aa10.13□□□□□ -0.79
NECAP1-207ENST00000544891 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-207ENST00000544891 MARCKSP29966 332 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-207ENST00000544891 GRIPAP1Q4V328 841 aa10.13□□□□□ -0.79
NECAP1-207ENST00000544891 PPP1R14CQ8TAE6 165 aa10.13□□□□□ -0.79
NECAP1-207ENST00000544891 SLC52A2Q9HAB3 445 aa10.13□□□□□ -0.79
NECAP1-207ENST00000544891 EXOC7Q9UPT5 735 aa10.13□□□□□ -0.79
NECAP1-207ENST00000544891 MBD4O95243 580 aa10.13□□□□□ -0.79
NECAP1-207ENST00000544891 APOBRQ0VD83 1088 aa10.13□□□□□ -0.79
NECAP1-207ENST00000544891 COMMD10Q9Y6G5 202 aa10.13□□□□□ -0.79
NECAP1-207ENST00000544891 RLBP1P12271 317 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 DNA2P51530 1060 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 TFCP2L1Q9NZI6 479 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 NT5C2P49902 561 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 CCDC14Q49A88 953 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 BRDTQ58F21 947 aaPredicted RBP10.12□□□□□ -0.79
NECAP1-207ENST00000544891 JARID2Q92833 1246 aaPredicted RBP10.12□□□□□ -0.79
NECAP1-207ENST00000544891 KIFAP3Q92845 792 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 TCEANC2Q96MN5 208 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 PXDNLA1KZ92 1463 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 RNF187Q5TA31 235 aaPredicted RBP10.12□□□□□ -0.79
NECAP1-207ENST00000544891 DSCC1Q9BVC3 393 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 NUCKS1Q9H1E3 243 aaKnown RBP10.12□□□□□ -0.79
NECAP1-207ENST00000544891 ZRANB1Q9UGI0 708 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.12□□□□□ -0.79
NECAP1-207ENST00000544891 MED1Q15648 1581 aaPredicted RBP10.12□□□□□ -0.79
NECAP1-207ENST00000544891 ARID4AP29374 1257 aaPredicted RBP10.12□□□□□ -0.79
NECAP1-207ENST00000544891 LMOD1P29536 600 aaPredicted RBP10.12□□□□□ -0.79
NECAP1-207ENST00000544891 SMTNP53814 917 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 ANO1Q5XXA6 986 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 RAB11FIP4Q86YS3 637 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.12□□□□□ -0.79
NECAP1-207ENST00000544891 TMOD4Q9NZQ9 345 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 IMPACTQ9P2X3 320 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 FRMD4BQ9Y2L6 1034 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 ALS2Q96Q42 1657 aa10.12□□□□□ -0.79
NECAP1-207ENST00000544891 A0A1W2PRG0 241 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 EPB41P11171 864 aaKnown RBP10.11□□□□□ -0.79
NECAP1-207ENST00000544891 PCP11498 1178 aaKnown RBP10.11□□□□□ -0.79
NECAP1-207ENST00000544891 FLAD1Q8NFF5 587 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 ACSBG1Q96GR2 724 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 GGA1Q9UJY5 639 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 TTF2Q9UNY4 1162 aaKnown RBP10.11□□□□□ -0.79
NECAP1-207ENST00000544891 NCKAP5LQ9HCH0 1330 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 HSPA4P34932 840 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 CHMP4BP1P59074 171 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 PICALMQ13492 652 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 C16orf71Q8IYS4 520 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-207ENST00000544891 AKR1B15C9JRZ8 316 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-207ENST00000544891 ATP5JP18859 108 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 ITGA6P23229 1130 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 UBXN1Q04323 297 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 UBE4AQ14139 1066 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 CCDC129Q6ZRS4 1044 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 C8orf37Q96NL8 207 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 CCDC87Q9NVE4 849 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 MRVI1Q9Y6F6 885 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 CRB1P82279 1406 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 ERICH4A6NGS2 130 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 CETN3O15182 167 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 GCKRQ14397 625 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 ANKS4BQ8N8V4 417 aa10.11□□□□□ -0.79
NECAP1-207ENST00000544891 GABPB2Q8TAK5 448 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-207ENST00000544891 IQSEC3Q9UPP2 1182 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-207ENST00000544891 ABCC4O15439 1325 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 XRCC6P12956 609 aaKnown RBP eCLIP10.1□□□□□ -0.79
NECAP1-207ENST00000544891 FBLN1P23142 703 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 ALDH3A1P30838 453 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 ISM2Q6H9L7 571 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 CCDC26Q8TAB7 109 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 STK32BQ9NY57 414 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 CLGNO14967 610 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 SLC27A2O14975 620 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 ATP5DP30049 168 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 CCDC84Q86UT8 332 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-207ENST00000544891 FCHSD1Q86WN1 690 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 V9GYY5 206 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-207ENST00000544891 CALCOCO2Q13137 446 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 SKAP1Q86WV1 359 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 IWS1Q96ST2 819 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.1□□□□□ -0.79
NECAP1-207ENST00000544891 WDR44Q5JSH3 913 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 CFAP58Q5T655 872 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 ATP6V0A2Q9Y487 856 aa10.1□□□□□ -0.79
NECAP1-207ENST00000544891 SLC8A3P57103 927 aa10.09□□□□□ -0.79
NECAP1-207ENST00000544891 NONOQ15233 471 aaKnown RBP eCLIP10.09□□□□□ -0.79
NECAP1-207ENST00000544891 PAXIP1Q6ZW49 1069 aaPredicted RBP10.09□□□□□ -0.79
NECAP1-207ENST00000544891 FBF1Q8TES7 1133 aa10.09□□□□□ -0.79
NECAP1-207ENST00000544891 XAGE2Q96GT9 111 aa10.09□□□□□ -0.79
NECAP1-207ENST00000544891 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
NECAP1-207ENST00000544891 GNPATO15228 680 aa10.09□□□□□ -0.79
NECAP1-207ENST00000544891 GPAA1O43292 621 aa10.09□□□□□ -0.79
NECAP1-207ENST00000544891 CALUO43852 315 aaPredicted RBP10.09□□□□□ -0.79
NECAP1-207ENST00000544891 CLSTN2Q9H4D0 955 aa10.09□□□□□ -0.79
NECAP1-207ENST00000544891 VEZTQ9HBM0 779 aa10.09□□□□□ -0.79
NECAP1-207ENST00000544891 BTG4Q9NY30 223 aa10.09□□□□□ -0.79
NECAP1-207ENST00000544891 CCNL1Q9UK58 526 aaPredicted RBP10.09□□□□□ -0.79
NECAP1-207ENST00000544891 KCNH3Q9ULD8 1083 aa10.09□□□□□ -0.79
NECAP1-207ENST00000544891 MCM7P33993 719 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms