RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ASTN2O75129 1339 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-220ENST00000544550 SH3TC1Q8TE82 1336 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 DUOX1Q9NRD9 1551 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 WDHD1O75717 1129 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-220ENST00000544550 GNRH1P01148 92 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 HCLS1P14317 486 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-220ENST00000544550 MYL6BP14649 208 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 CAPN2P17655 700 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 PTPN12Q05209 780 aaKnown RBP5.37□□□□□ -1.55
SNHG1-220ENST00000544550 TRIM26Q12899 539 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-220ENST00000544550 CRHR2Q13324 411 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 NBPF20Q3BBV1 942 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 LDLRAD1Q5T700 205 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 MCM10Q7L590 875 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 APOBEC3FQ8IUX4 373 aaKnown RBP5.37□□□□□ -1.55
SNHG1-220ENST00000544550 TBC1D16Q8TBP0 767 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 COL25A1Q9BXS0 654 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-220ENST00000544550 POLLQ9UGP5 575 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 TRMT112Q9UI30 125 aaKnown RBP5.37□□□□□ -1.55
SNHG1-220ENST00000544550 ANGEL1Q9UNK9 670 aaKnown RBP5.37□□□□□ -1.55
SNHG1-220ENST00000544550 STXBP5LQ9Y2K9 1186 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 MAP4K5Q9Y4K4 846 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 MYO3BQ8WXR4 1341 aa5.37□□□□□ -1.55
SNHG1-220ENST00000544550 COL1A1P02452 1464 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-220ENST00000544550 FAM196BA6NMK8 535 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 ATP5J2-PTCD1G3V325 749 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 IGF2BP3O00425 579 aaKnown RBP eCLIP5.36□□□□□ -1.55
SNHG1-220ENST00000544550 PPP1R12BO60237 982 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-220ENST00000544550 PRKAR2BP31323 418 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 PRMT2P55345 433 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 GPSM2P81274 684 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 KIF22Q14807 665 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 MAP3K11Q16584 847 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 EML3Q32P44 896 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 PRAMEF18Q5VWM3 479 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 PODNQ7Z5L7 613 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 CYP4X1Q8N118 509 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 WNK4Q96J92 1243 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 PHACTR3Q96KR7 559 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 CDK15Q96Q40 435 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 KCTD15Q96SI1 283 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-220ENST00000544550 GMLQ99445 158 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 ZFYVE28Q9HCC9 887 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 KCNQ5Q9NR82 932 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 PODXL2Q9NZ53 605 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 GGA1Q9UJY5 639 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 ZMIZ1Q9ULJ6 1067 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 DOLKQ9UPQ8 538 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 NUDCQ9Y266 331 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 PPP2R3BQ9Y5P8 575 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 PTCH2Q9Y6C5 1203 aa5.36□□□□□ -1.55
SNHG1-220ENST00000544550 DDX60Q8IY21 1712 aaKnown RBP5.36□□□□□ -1.55
SNHG1-220ENST00000544550 WNT10BO00744 389 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 ZBTB7BO15156 539 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-220ENST00000544550 SIAH2O43255 324 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 UFL1O94874 794 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 HSP90B1P14625 803 aaKnown RBP5.35□□□□□ -1.55
SNHG1-220ENST00000544550 PTK7Q13308 1070 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 PRKG1Q13976 671 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 SF3B3Q15393 1217 aaKnown RBP5.35□□□□□ -1.55
SNHG1-220ENST00000544550 CRTC2Q53ET0 693 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-220ENST00000544550 NLRP10Q86W26 655 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNHG1-220ENST00000544550 NPAS3Q8IXF0 933 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 KCTD17Q8N5Z5 321 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 DEFB123Q8N688 67 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 EHBP1Q8NDI1 1231 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 CELF1Q92879 486 aaKnown RBP5.35□□□□□ -1.55
SNHG1-220ENST00000544550 CFAP53Q96M91 514 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 ANKIB1Q9P2G1 1089 aa5.35□□□□□ -1.55
SNHG1-220ENST00000544550 LAMB4A4D0S4 1761 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 LRRC37AA6NMS7 1700 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 COL3A1P02461 1466 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-220ENST00000544550 WTIPA6NIX2 430 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L15C9J2P7 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L10C9JJH3 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L13C9JLJ4 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L12C9JPN9 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L11C9JVI0 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L21D6R901 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L18D6R9N7 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L22D6RA61 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L17D6RBQ6 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L19D6RCP7 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L20D6RJB6 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 SOX1O00570 391 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-220ENST00000544550 MYCP01106 439 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-220ENST00000544550 NEFMP07197 916 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 RASA1P20936 1047 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 BMP8BP34820 402 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 GJA8P48165 433 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 IREB2P48200 963 aaKnown RBP5.34□□□□□ -1.55
SNHG1-220ENST00000544550 EIF4A1P60842 406 aaKnown RBP5.34□□□□□ -1.55
SNHG1-220ENST00000544550 RPS8P62241 208 aaKnown RBP5.34□□□□□ -1.55
SNHG1-220ENST00000544550 USP17L24Q0WX57 530 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 NBPF9Q3BBW0 867 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 SUPT20HL1Q3ZLR7 823 aa5.34□□□□□ -1.55
SNHG1-220ENST00000544550 INTS6LQ5JSJ4 861 aaKnown RBP5.34□□□□□ -1.55
SNHG1-220ENST00000544550 VASH1Q7L8A9 365 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-220ENST00000544550 TRIM50Q86XT4 487 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms