RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SERPINA10Q9UK55 444 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 PALD1Q9ULE6 856 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 ARID4AP29374 1257 aaPredicted RBP14.36□□□□□ -0.11
CHD4-211ENST00000544484 FANCCQ00597 558 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 CFBP00751 764 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 RNASE9P60153 205 aaKnown RBP14.36□□□□□ -0.11
CHD4-211ENST00000544484 FNBP1Q96RU3 617 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 ADCY7P51828 1080 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 BEND3Q5T5X7 828 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 NSMFQ6X4W1 530 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 C17orf53Q8N3J3 647 aaPredicted RBP14.35□□□□□ -0.11
CHD4-211ENST00000544484 GTPBP4Q9BZE4 634 aaKnown RBP14.35□□□□□ -0.11
CHD4-211ENST00000544484 PPARAQ07869 468 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 CNNM4Q6P4Q7 775 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 MAST3O60307 1309 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 PROSER3Q2NL68 480 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 CEP83Q9Y592 693 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 SYNRGQ9UMZ2 1314 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 HERC4Q5GLZ8 1057 aaPredicted RBP14.35□□□□□ -0.11
CHD4-211ENST00000544484 MFSD14BQ5SR56 506 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 GIGYF2Q6Y7W6 1299 aaKnown RBP14.35□□□□□ -0.11
CHD4-211ENST00000544484 TMOD4Q9NZQ9 345 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 HAUS3Q68CZ6 603 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 BLZF1Q9H2G9 400 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 YEATS2Q9ULM3 1422 aa14.35□□□□□ -0.11
CHD4-211ENST00000544484 CEP170Q5SW79 1584 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 TRMT44Q8IYL2 757 aaKnown RBP14.34□□□□□ -0.11
CHD4-211ENST00000544484 OTUD6BQ8N6M0 293 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 FAM170AA1A519 330 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 ARHGEF35A5YM69 484 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 LONRF3Q496Y0 759 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 ARL1P40616 181 aaPredicted RBP14.34□□□□□ -0.11
CHD4-211ENST00000544484 PAK1Q13153 545 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 NELFCDQ8IXH7 590 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 CCDC77Q9BR77 488 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 TAB2Q9NYJ8 693 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 TTF2Q9UNY4 1162 aaKnown RBP14.34□□□□□ -0.11
CHD4-211ENST00000544484 NFE2L3Q9Y4A8 694 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 KDRP35968 1356 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 GIMAP7Q8NHV1 300 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 SELENOSQ9BQE4 189 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
CHD4-211ENST00000544484 USP40Q9NVE5 1235 aa14.33□□□□□ -0.11
CHD4-211ENST00000544484 ZNF654Q8IZM8 581 aa14.33□□□□□ -0.12
CHD4-211ENST00000544484 RSPH14Q9UHP6 348 aa14.33□□□□□ -0.12
CHD4-211ENST00000544484 TICAM2Q86XR7 235 aa14.33□□□□□ -0.12
CHD4-211ENST00000544484 ADD1P35611 737 aaKnown RBP14.33□□□□□ -0.12
CHD4-211ENST00000544484 KRT25Q7Z3Z0 450 aa14.33□□□□□ -0.12
CHD4-211ENST00000544484 LMBRD1Q9NUN5 540 aa14.33□□□□□ -0.12
CHD4-211ENST00000544484 BIN2Q9UBW5 565 aaPredicted RBP14.33□□□□□ -0.12
CHD4-211ENST00000544484 CALCRLQ16602 461 aa14.33□□□□□ -0.12
CHD4-211ENST00000544484 HS1BP3Q53T59 392 aa14.33□□□□□ -0.12
CHD4-211ENST00000544484 CCDC114Q96M63 670 aa14.33□□□□□ -0.12
CHD4-211ENST00000544484 METP08581 1390 aa14.33□□□□□ -0.12
CHD4-211ENST00000544484 CETN3O15182 167 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 TUBB4AP04350 444 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 SMTNP53814 917 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 POSTNQ15063 836 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 PPP1R7Q15435 360 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 ZBTB38Q8NAP3 1195 aaPredicted RBP14.32□□□□□ -0.12
CHD4-211ENST00000544484 ATP2A1O14983 1001 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 PDE6AP16499 860 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 KRT9P35527 623 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 GTF3C6Q969F1 213 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 PUS3Q9BZE2 481 aaKnown RBP14.32□□□□□ -0.12
CHD4-211ENST00000544484 PPIP5K2O43314 1243 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 OPA1O60313 960 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 WDR44Q5JSH3 913 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 IFNL3Q8IZI9 196 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 ASAP1Q9ULH1 1129 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 MAGI3Q5TCQ9 1506 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 HSPD1P10809 573 aaKnown RBP14.32□□□□□ -0.12
CHD4-211ENST00000544484 CCDC63Q8NA47 563 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 PRAMEF22A3QJZ6 481 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 TNFAIP3P21580 790 aa14.32□□□□□ -0.12
CHD4-211ENST00000544484 KIF4AO95239 1232 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 SCNN1DP51172 638 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 VAV2P52735 878 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 MLKLQ8NB16 471 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.31□□□□□ -0.12
CHD4-211ENST00000544484 DDX12PQ92771 950 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 GREM2Q9H772 168 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 NLRP12P59046 1061 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 PNOCQ13519 176 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 DLGAP5Q15398 846 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 CABP7Q86V35 215 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 KIFC2Q96AC6 838 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 PABPN1LA6NDY0 278 aaKnown RBP14.31□□□□□ -0.12
CHD4-211ENST00000544484 ZEB2O60315 1214 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 ZNF75DP51815 510 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 DOK7Q18PE1 504 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 TM6SF1Q9BZW5 370 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 VPS18Q9P253 973 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 TPCN1Q9ULQ1 816 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 IGSF3O75054 1194 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 PLEKHF1Q96S99 279 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 MAGI2Q86UL8 1455 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
CHD4-211ENST00000544484 INSRP06213 1382 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms