RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 SH3RF3Q8TEJ3 882 aaPredicted RBP18.71■□□□□ 0.59
SPDEF-202ENST00000544425 PPFIA3O75145 1194 aa18.7■□□□□ 0.58
SPDEF-202ENST00000544425 RXRAP19793 462 aa18.7■□□□□ 0.58
SPDEF-202ENST00000544425 ZNF396Q96N95 335 aaPredicted RBP18.7■□□□□ 0.58
SPDEF-202ENST00000544425 EYA3Q99504 573 aa18.7■□□□□ 0.58
SPDEF-202ENST00000544425 MCM9Q9NXL9 1143 aa18.7■□□□□ 0.58
SPDEF-202ENST00000544425 GAKO14976 1311 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 RANBP6O60518 1105 aaKnown RBP18.69■□□□□ 0.58
SPDEF-202ENST00000544425 CCDC183Q5T5S1 534 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 ZNF654Q8IZM8 581 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 ZNF622Q969S3 477 aaKnown RBP eCLIP18.69■□□□□ 0.58
SPDEF-202ENST00000544425 MYL10Q9BUA6 226 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 RCOR1Q9UKL0 485 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 RIMBP2O15034 1052 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 FMNL1O95466 1100 aaPredicted RBP18.69■□□□□ 0.58
SPDEF-202ENST00000544425 SSRP1Q08945 709 aaKnown RBP18.69■□□□□ 0.58
SPDEF-202ENST00000544425 RTN1Q16799 776 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 BRAPQ7Z569 592 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 ENAHQ8N8S7 591 aaPredicted RBP18.69■□□□□ 0.58
SPDEF-202ENST00000544425 FANCBQ8NB91 859 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 ALG1Q9BT22 464 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 CCDC88AQ3V6T2 1871 aa18.69■□□□□ 0.58
SPDEF-202ENST00000544425 SYCE3A1L190 88 aa18.68■□□□□ 0.58
SPDEF-202ENST00000544425 USP17L8P0C7I0 530 aa18.68■□□□□ 0.58
SPDEF-202ENST00000544425 BTDP43251 543 aa18.68■□□□□ 0.58
SPDEF-202ENST00000544425 GTF2IP78347 998 aa18.68■□□□□ 0.58
SPDEF-202ENST00000544425 GUCY1B3Q02153 619 aa18.68■□□□□ 0.58
SPDEF-202ENST00000544425 AMOTL1Q8IY63 956 aa18.68■□□□□ 0.58
SPDEF-202ENST00000544425 WASF1Q92558 559 aa18.68■□□□□ 0.58
SPDEF-202ENST00000544425 PRDM1O75626 825 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 CYP2D6P10635 497 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 FOSBP53539 338 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 IFIT1BQ5T764 474 aaKnown RBP18.67■□□□□ 0.58
SPDEF-202ENST00000544425 CCDC144CPQ8IYA2 1237 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 CNKSR1Q969H4 720 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 ROBO3Q96MS0 1386 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 CALM1P0DP23 149 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 CALM2P0DP24 149 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 CALM3P0DP25 149 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 PODNQ7Z5L7 613 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 TGFBRAP1Q8WUH2 860 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 PHKBQ93100 1093 aa18.67■□□□□ 0.58
SPDEF-202ENST00000544425 GOLGA6L4A6NEF3 574 aa18.66■□□□□ 0.58
SPDEF-202ENST00000544425 BAG6P46379 1132 aa18.66■□□□□ 0.58
SPDEF-202ENST00000544425 RHBDL3P58872 404 aa18.66■□□□□ 0.58
SPDEF-202ENST00000544425 OTUD7BQ6GQQ9 843 aa18.66■□□□□ 0.58
SPDEF-202ENST00000544425 OLFM4Q6UX06 510 aa18.66■□□□□ 0.58
SPDEF-202ENST00000544425 CATIPQ7Z7H3 387 aa18.66■□□□□ 0.58
SPDEF-202ENST00000544425 CRACR2BQ8N4Y2 399 aaPredicted RBP18.66■□□□□ 0.58
SPDEF-202ENST00000544425 KIF23Q02241 960 aaPredicted RBP18.65■□□□□ 0.58
SPDEF-202ENST00000544425 EVX2Q03828 476 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 SF3B2Q13435 895 aaKnown RBP18.65■□□□□ 0.58
SPDEF-202ENST00000544425 NBPF11Q86T75 865 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 TRIM22Q8IYM9 498 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 CHD4Q14839 1912 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 DDAH1O94760 285 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 TROAPQ12815 778 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 CCDC178Q5BJE1 867 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 KRT40Q6A162 431 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 ANKS1AQ92625 1134 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 PGBD1Q96JS3 809 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 USP28Q96RU2 1077 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 SLC26A6Q9BXS9 759 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 RBM28Q9NW13 759 aaKnown RBP18.65■□□□□ 0.58
SPDEF-202ENST00000544425 RTEL1Q9NZ71 1219 aa18.65■□□□□ 0.58
SPDEF-202ENST00000544425 DEXIO95424 95 aa18.64■□□□□ 0.57
SPDEF-202ENST00000544425 CC2D2BQ6DHV5 1058 aa18.64■□□□□ 0.57
SPDEF-202ENST00000544425 TEX11Q8IYF3 940 aa18.64■□□□□ 0.57
SPDEF-202ENST00000544425 NUP133Q8WUM0 1156 aa18.64■□□□□ 0.57
SPDEF-202ENST00000544425 ZNF287Q9HBT7 754 aa18.64■□□□□ 0.57
SPDEF-202ENST00000544425 TCHHQ07283 1943 aa18.64■□□□□ 0.57
SPDEF-202ENST00000544425 TSPY2A6NKD2 308 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 POLR3DP05423 398 aaPredicted RBP18.63■□□□□ 0.57
SPDEF-202ENST00000544425 TRIM29Q14134 588 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 DGKHQ86XP1 1220 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 C7orf43Q8WVR3 580 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 RNF26Q9BY78 433 aaPredicted RBP18.63■□□□□ 0.57
SPDEF-202ENST00000544425 TCP11L1Q9NUJ3 509 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 COL11A2P13942 1736 aaPredicted RBP18.63■□□□□ 0.57
SPDEF-202ENST00000544425 G3V3G9 751 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 FKBP1AP62942 108 aaKnown RBP18.63■□□□□ 0.57
SPDEF-202ENST00000544425 DOK7Q18PE1 504 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 FAM47AQ5JRC9 791 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 DCAF8Q5TAQ9 597 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 MYSM1Q5VVJ2 828 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 MAPKAPK5Q8IW41 473 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 AIFM3Q96NN9 605 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 GJB4Q9NTQ9 266 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 DAGLAQ9Y4D2 1042 aa18.63■□□□□ 0.57
SPDEF-202ENST00000544425 QSER1Q2KHR3 1735 aa18.62■□□□□ 0.57
SPDEF-202ENST00000544425 U2AF2P26368 475 aaKnown RBP eCLIP18.62■□□□□ 0.57
SPDEF-202ENST00000544425 CERS5Q8N5B7 392 aa18.62■□□□□ 0.57
SPDEF-202ENST00000544425 MRIQ9BWK5 157 aa18.62■□□□□ 0.57
SPDEF-202ENST00000544425 RBSNQ9H1K0 784 aa18.62■□□□□ 0.57
SPDEF-202ENST00000544425 MKNK2Q9HBH9 465 aa18.62■□□□□ 0.57
SPDEF-202ENST00000544425 POLR3EQ9NVU0 708 aa18.62■□□□□ 0.57
SPDEF-202ENST00000544425 YEATS4O95619 227 aa18.61■□□□□ 0.57
SPDEF-202ENST00000544425 PLCD1P51178 756 aa18.61■□□□□ 0.57
SPDEF-202ENST00000544425 TFAP4Q01664 338 aa18.61■□□□□ 0.57
SPDEF-202ENST00000544425 HHIPL2Q6UWX4 724 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms