RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 NCAPH2Q6IBW4 605 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 TSPYL6Q8N831 410 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 GADD45BO75293 160 aaPredicted RBP17.18■□□□□ 0.34
CHD4-210ENST00000544040 PHLDB2Q86SQ0 1253 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 MYRIPQ8NFW9 859 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 AFAP1L2Q8N4X5 818 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 NSD2O96028 1365 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 STK10O94804 968 aaKnown RBP17.18■□□□□ 0.34
CHD4-210ENST00000544040 MUM1Q2TAK8 710 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 SLC9C1Q4G0N8 1177 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 NOS1P29475 1434 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 POGZQ7Z3K3 1410 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 LDHBP07195 334 aaKnown RBP17.18■□□□□ 0.34
CHD4-210ENST00000544040 BSPRYQ5W0U4 402 aa17.18■□□□□ 0.34
CHD4-210ENST00000544040 ZCRB1Q8TBF4 217 aaKnown RBP17.18■□□□□ 0.34
CHD4-210ENST00000544040 NELFCDQ8IXH7 590 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 TRMT44Q8IYL2 757 aaKnown RBP17.17■□□□□ 0.34
CHD4-210ENST00000544040 WHAMMQ8TF30 809 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 TSC1Q92574 1164 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 NSFL1CQ9UNZ2 370 aaKnown RBP17.17■□□□□ 0.34
CHD4-210ENST00000544040 IRS4O14654 1257 aaPredicted RBP17.17■□□□□ 0.34
CHD4-210ENST00000544040 CUL4BQ13620 913 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 PTPROQ16827 1216 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 DZIP3Q86Y13 1208 aaKnown RBP17.17■□□□□ 0.34
CHD4-210ENST00000544040 ARHGAP24Q8N264 748 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 BLZF1Q9H2G9 400 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 GBP5Q96PP8 586 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 PAK2Q13177 524 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 DACT3Q96B18 629 aaPredicted RBP17.17■□□□□ 0.34
CHD4-210ENST00000544040 CAPN7Q9Y6W3 813 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 DENND2CQ68D51 928 aa17.17■□□□□ 0.34
CHD4-210ENST00000544040 SLC27A2O14975 620 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 TYW1BQ6NUM6 668 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 ARMT1Q9H993 441 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 NLRP12P59046 1061 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 GINS2Q9Y248 185 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 V9GY48 417 aaPredicted RBP17.16■□□□□ 0.34
CHD4-210ENST00000544040 FRMD3A2A2Y4 597 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 SMTNP53814 917 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 SLC8A3P57103 927 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 SESN3P58005 492 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 EFCAB5A4FU69 1503 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 MAGEA1P43355 309 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 KRT71Q3SY84 523 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 STAMQ92783 540 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 SCAF11Q99590 1463 aaKnown RBP17.16■□□□□ 0.34
CHD4-210ENST00000544040 ARHGAP42A6NI28 874 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 TUBB2AQ13885 445 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 DCUN1D2Q6PH85 259 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 MICAL1Q8TDZ2 1067 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 MYL10Q9BUA6 226 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 TUBB2BQ9BVA1 445 aa17.16■□□□□ 0.34
CHD4-210ENST00000544040 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.16■□□□□ 0.342e-6■■■■□ 22.6
CHD4-210ENST00000544040 BAG2O95816 211 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 STRN3Q13033 797 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 NELFBQ8WX92 580 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 OPHN1O60890 802 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 ANKRD20A3Q5VUR7 823 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 ANKRD36BQ8N2N9 1353 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
CHD4-210ENST00000544040 ADKP55263 362 aaKnown RBP17.15■□□□□ 0.34
CHD4-210ENST00000544040 LRMPQ12912 555 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 RILPL1Q5EBL4 403 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 PLCB1Q9NQ66 1216 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 MAP2K2P36507 400 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 B4DLN1 442 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 MRPL12P52815 198 aaKnown RBP17.15■□□□□ 0.34
CHD4-210ENST00000544040 RIPOR2Q9Y4F9 1068 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 MSH6P52701 1360 aa17.15■□□□□ 0.34
CHD4-210ENST00000544040 ZNF202O95125 648 aa17.14■□□□□ 0.34
CHD4-210ENST00000544040 DEXIO95424 95 aa17.14■□□□□ 0.34
CHD4-210ENST00000544040 GNGT1P63211 74 aa17.14■□□□□ 0.34
CHD4-210ENST00000544040 RPS6KA1Q15418 735 aa17.14■□□□□ 0.34
CHD4-210ENST00000544040 LONRF2Q1L5Z9 754 aa17.14■□□□□ 0.34
CHD4-210ENST00000544040 CFAP221Q4G0U5 840 aa17.14■□□□□ 0.34
CHD4-210ENST00000544040 PEX26Q7Z412 305 aa17.14■□□□□ 0.34
CHD4-210ENST00000544040 TPX2Q9ULW0 747 aaKnown RBP17.14■□□□□ 0.33
CHD4-210ENST00000544040 ATP1A2P50993 1020 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 GABPB1Q06547 395 aaPredicted RBP17.14■□□□□ 0.33
CHD4-210ENST00000544040 KLHL30Q0D2K2 578 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 ZYXQ15942 572 aaKnown RBP17.14■□□□□ 0.33
CHD4-210ENST00000544040 ARHGAP44Q17R89 818 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 CCDC89Q8N998 374 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 LRRC59Q96AG4 307 aaKnown RBP17.14■□□□□ 0.33
CHD4-210ENST00000544040 GCKP35557 465 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 MTHFSDQ2M296 383 aaKnown RBP17.14■□□□□ 0.33
CHD4-210ENST00000544040 PRR16Q569H4 304 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 CAPN12Q6ZSI9 719 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 FNBP4Q8N3X1 1017 aaPredicted RBP17.14■□□□□ 0.33
CHD4-210ENST00000544040 DDX41Q9UJV9 622 aaKnown RBP17.14■□□□□ 0.33
CHD4-210ENST00000544040 MYCLP12524 364 aaPredicted RBP17.14■□□□□ 0.33
CHD4-210ENST00000544040 STX2P32856 288 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 ATL3Q6DD88 541 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 NXNQ6DKJ4 435 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 NUP58Q9BVL2 599 aa17.14■□□□□ 0.33
CHD4-210ENST00000544040 KRT19P08727 400 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms