RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 CTNND1O60716 968 aaKnown RBP21.51■■□□□ 1.03
TSFM-208ENST00000543727 GNAT2P19087 354 aa21.51■■□□□ 1.03
TSFM-208ENST00000543727 SREBF2Q12772 1141 aa21.51■■□□□ 1.03
TSFM-208ENST00000543727 PUS7LQ9H0K6 701 aaKnown RBP21.51■■□□□ 1.03
TSFM-208ENST00000543727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.51■■□□□ 1.03
TSFM-208ENST00000543727 MANSC4A6NHS7 340 aaPredicted RBP21.5■■□□□ 1.03
TSFM-208ENST00000543727 GIMAP6Q6P9H5 292 aa21.5■■□□□ 1.03
TSFM-208ENST00000543727 TRIM34Q9BYJ4 488 aa21.5■■□□□ 1.03
TSFM-208ENST00000543727 ARMT1Q9H993 441 aa21.5■■□□□ 1.03
TSFM-208ENST00000543727 DCP1AQ9NPI6 582 aaPredicted RBP21.5■■□□□ 1.03
TSFM-208ENST00000543727 PALD1Q9ULE6 856 aa21.5■■□□□ 1.03
TSFM-208ENST00000543727 SNCAIPQ9Y6H5 919 aa21.5■■□□□ 1.03
TSFM-208ENST00000543727 PTPRFP10586 1907 aa21.5■■□□□ 1.03
TSFM-208ENST00000543727 KIF23Q02241 960 aaPredicted RBP21.49■■□□□ 1.03
TSFM-208ENST00000543727 PPATQ06203 517 aa21.49■■□□□ 1.03
TSFM-208ENST00000543727 ZMYM1Q5SVZ6 1142 aa21.49■■□□□ 1.03
TSFM-208ENST00000543727 AMOTL1Q8IY63 956 aa21.49■■□□□ 1.03
TSFM-208ENST00000543727 SCYL3Q8IZE3 742 aa21.49■■□□□ 1.03
TSFM-208ENST00000543727 CRACR2BQ8N4Y2 399 aaPredicted RBP21.49■■□□□ 1.03
TSFM-208ENST00000543727 OSBP2Q969R2 916 aa21.49■■□□□ 1.03
TSFM-208ENST00000543727 OPTNQ96CV9 577 aa21.49■■□□□ 1.03
TSFM-208ENST00000543727 ELP3Q9H9T3 547 aa21.49■■□□□ 1.03
TSFM-208ENST00000543727 GINM1Q9NU53 330 aa21.49■■□□□ 1.03
TSFM-208ENST00000543727 TRIM6-TRIM34B2RNG4 842 aa21.48■■□□□ 1.03
TSFM-208ENST00000543727 INPP5BP32019 993 aa21.48■■□□□ 1.03
TSFM-208ENST00000543727 TM4SF4P48230 202 aa21.48■■□□□ 1.03
TSFM-208ENST00000543727 PPIL2Q13356 520 aa21.48■■□□□ 1.03
TSFM-208ENST00000543727 ZKSCAN4Q969J2 545 aaPredicted RBP21.48■■□□□ 1.03
TSFM-208ENST00000543727 STRBPQ96SI9 672 aaKnown RBP21.48■■□□□ 1.03
TSFM-208ENST00000543727 TBC1D2Q9BYX2 928 aa21.48■■□□□ 1.03
TSFM-208ENST00000543727 PICK1Q9NRD5 415 aa21.48■■□□□ 1.03
TSFM-208ENST00000543727 SAGE1Q9NXZ1 904 aa21.48■■□□□ 1.03
TSFM-208ENST00000543727 SERPINB13Q9UIV8 391 aa21.48■■□□□ 1.03
TSFM-208ENST00000543727 GPAA1O43292 621 aa21.47■■□□□ 1.03
TSFM-208ENST00000543727 HSPA1AP0DMV8 641 aaKnown RBP21.47■■□□□ 1.03
TSFM-208ENST00000543727 HSPA1BP0DMV9 641 aaKnown RBP21.47■■□□□ 1.03
TSFM-208ENST00000543727 SLFNL1Q499Z3 407 aa21.47■■□□□ 1.03
TSFM-208ENST00000543727 SDR42E1Q8WUS8 393 aa21.47■■□□□ 1.03
TSFM-208ENST00000543727 CCDC136Q96JN2 1154 aa21.47■■□□□ 1.03
TSFM-208ENST00000543727 MCM9Q9NXL9 1143 aa21.47■■□□□ 1.03
TSFM-208ENST00000543727 SAP30BPQ9UHR5 308 aaKnown RBP21.47■■□□□ 1.03
TSFM-208ENST00000543727 SLC4A4Q9Y6R1 1079 aa21.47■■□□□ 1.03
TSFM-208ENST00000543727 HIP1O00291 1037 aa21.46■■□□□ 1.03
TSFM-208ENST00000543727 CHGBP05060 677 aa21.46■■□□□ 1.03
TSFM-208ENST00000543727 POLR3DP05423 398 aaPredicted RBP21.46■■□□□ 1.03
TSFM-208ENST00000543727 PDE4AP27815 886 aa21.46■■□□□ 1.03
TSFM-208ENST00000543727 GTF2A2P52657 109 aa21.46■■□□□ 1.03
TSFM-208ENST00000543727 HELLSQ9NRZ9 838 aa21.46■■□□□ 1.03
TSFM-208ENST00000543727 ARPP21Q9UBL0 812 aaPredicted RBP21.46■■□□□ 1.03
TSFM-208ENST00000543727 ALDH1A1P00352 501 aa21.45■■□□□ 1.02
TSFM-208ENST00000543727 RILPL2Q969X0 211 aa21.45■■□□□ 1.02
TSFM-208ENST00000543727 OTUD5Q96G74 571 aa21.45■■□□□ 1.02
TSFM-208ENST00000543727 ZIC5Q96T25 663 aa21.45■■□□□ 1.02
TSFM-208ENST00000543727 TESPA1A2RU30 521 aaPredicted RBP21.44■■□□□ 1.02
TSFM-208ENST00000543727 GJA5P36382 358 aa21.44■■□□□ 1.02
TSFM-208ENST00000543727 CAP2P40123 477 aa21.44■■□□□ 1.02
TSFM-208ENST00000543727 TTC22Q5TAA0 569 aa21.44■■□□□ 1.02
TSFM-208ENST00000543727 NACAP1Q9BZK3 213 aa21.44■■□□□ 1.02
TSFM-208ENST00000543727 SWAP70Q9UH65 585 aa21.44■■□□□ 1.02
TSFM-208ENST00000543727 M0R2C6 588 aa21.43■■□□□ 1.02
TSFM-208ENST00000543727 ASNSP08243 561 aa21.43■■□□□ 1.02
TSFM-208ENST00000543727 MFAP1P55081 439 aaKnown RBP21.43■■□□□ 1.02
TSFM-208ENST00000543727 GABPAQ06546 454 aa21.43■■□□□ 1.02
TSFM-208ENST00000543727 SNAPC2Q13487 334 aa21.43■■□□□ 1.02
TSFM-208ENST00000543727 OTUD7BQ6GQQ9 843 aa21.43■■□□□ 1.02
TSFM-208ENST00000543727 TATDN1Q6P1N9 297 aa21.43■■□□□ 1.02
TSFM-208ENST00000543727 DNAJC18Q9H819 358 aa21.43■■□□□ 1.02
TSFM-208ENST00000543727 KCNH4Q9UQ05 1017 aa21.43■■□□□ 1.02
TSFM-208ENST00000543727 LOC285556D6RIA3 1793 aa21.43■■□□□ 1.02
TSFM-208ENST00000543727 PATL2C9JE40 543 aaKnown RBP21.42■■□□□ 1.02
TSFM-208ENST00000543727 CXCL11O14625 94 aa21.42■■□□□ 1.02
TSFM-208ENST00000543727 PRKAB2O43741 272 aa21.42■■□□□ 1.02
TSFM-208ENST00000543727 CETPP11597 493 aa21.42■■□□□ 1.02
TSFM-208ENST00000543727 PTPRAP18433 802 aa21.42■■□□□ 1.02
TSFM-208ENST00000543727 CTCFP49711 727 aaPredicted RBP21.42■■□□□ 1.02
TSFM-208ENST00000543727 PLCD1P51178 756 aa21.42■■□□□ 1.02
TSFM-208ENST00000543727 MKRN3Q13064 507 aaKnown RBP21.42■■□□□ 1.02
TSFM-208ENST00000543727 SBK1Q52WX2 424 aa21.42■■□□□ 1.02
TSFM-208ENST00000543727 MS4A4AQ96JQ5 239 aa21.42■■□□□ 1.02
TSFM-208ENST00000543727 CFHR5Q9BXR6 569 aa21.42■■□□□ 1.02
TSFM-208ENST00000543727 ZCCHC17Q9NP64 241 aaKnown RBP21.42■■□□□ 1.02
TSFM-208ENST00000543727 ROBO3Q96MS0 1386 aa21.41■■□□□ 1.02
TSFM-208ENST00000543727 FAM196BA6NMK8 535 aa21.41■■□□□ 1.02
TSFM-208ENST00000543727 GSG1L2A8MUP6 293 aa21.41■■□□□ 1.02
TSFM-208ENST00000543727 MCMDC2Q4G0Z9 681 aa21.41■■□□□ 1.02
TSFM-208ENST00000543727 C12orf60Q5U649 245 aa21.41■■□□□ 1.02
TSFM-208ENST00000543727 IRF6O14896 467 aa21.4■■□□□ 1.02
TSFM-208ENST00000543727 SDSP20132 328 aa21.4■■□□□ 1.02
TSFM-208ENST00000543727 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
TSFM-208ENST00000543727 AS3MTQ9HBK9 375 aa21.4■■□□□ 1.02
TSFM-208ENST00000543727 USP17L5A8MUK1 530 aa21.39■■□□□ 1.01
TSFM-208ENST00000543727 USP17L12C9JPN9 530 aa21.39■■□□□ 1.01
TSFM-208ENST00000543727 USP17L21D6R901 530 aa21.39■■□□□ 1.01
TSFM-208ENST00000543727 IFNL1Q8IU54 200 aa21.39■■□□□ 1.01
TSFM-208ENST00000543727 SEC62Q99442 399 aaKnown RBP21.39■■□□□ 1.01
TSFM-208ENST00000543727 DIAPH3Q9NSV4 1193 aa21.39■■□□□ 1.01
TSFM-208ENST00000543727 AFG3L2Q9Y4W6 797 aa21.39■■□□□ 1.01
TSFM-208ENST00000543727 ZHX2Q9Y6X8 837 aa21.39■■□□□ 1.01
TSFM-208ENST00000543727 LAMA4Q16363 1823 aa21.39■■□□□ 1.01
TSFM-208ENST00000543727 ZMYM6O95789 1325 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms