RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 TTC39AQ5SRH9 613 aa16.33■□□□□ 0.2
PRAME-214ENST00000543184 CYB5R4Q7L1T6 521 aa16.33■□□□□ 0.2
PRAME-214ENST00000543184 RALYLQ86SE5 291 aaKnown RBP16.33■□□□□ 0.2
PRAME-214ENST00000543184 MB21D2Q8IYB1 491 aaPredicted RBP16.33■□□□□ 0.2
PRAME-214ENST00000543184 CMTR1Q8N1G2 835 aaKnown RBP16.33■□□□□ 0.2
PRAME-214ENST00000543184 PPP2R2CQ9Y2T4 447 aa16.33■□□□□ 0.2
PRAME-214ENST00000543184 CCDC66A2RUB6 948 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 ZRANB2O95218 330 aaKnown RBP eCLIP16.32■□□□□ 0.21e-10■■■□□ 15.8
PRAME-214ENST00000543184 CYP2C19P33261 490 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 KRT40Q6A162 431 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 SMARCE1Q969G3 411 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 EYA2O00167 538 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 PRR29P0C7W0 189 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 MYL5Q02045 173 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 PDE4CQ08493 712 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 SLC39A14Q15043 492 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 CPLX3Q8WVH0 158 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 NIP7Q9Y221 180 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRAME-214ENST00000543184 MAP3K15Q6ZN16 1313 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 NRDCO43847 1150 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 FMR1Q06787 632 aaKnown RBP eCLIP16.32■□□□□ 0.26e-14■□□□□ 9.2
PRAME-214ENST00000543184 XAGE2Q96GT9 111 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 BPIFA3Q9BQP9 254 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 NBPF3Q9H094 633 aa16.32■□□□□ 0.2
PRAME-214ENST00000543184 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.32■□□□□ 0.2
PRAME-214ENST00000543184 ZNF213O14771 459 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 TMEM139Q8IV31 216 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 VSTM4Q8IW00 320 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 CAMKK2Q96RR4 588 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 B4E1Z4 1266 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 H7C1W4 665 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 ZPR1O75312 459 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 CAMTA2O94983 1202 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 OAS2P29728 719 aaKnown RBP16.31■□□□□ 0.2
PRAME-214ENST00000543184 BAG6P46379 1132 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 TBC1D10CQ8IV04 446 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 CNNM3Q8NE01 707 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 WWC3Q9ULE0 1092 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 UBN2Q6ZU65 1347 aa16.31■□□□□ 0.2
PRAME-214ENST00000543184 TJP1Q07157 1748 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 PLSCR1O15162 318 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 GPAA1O43292 621 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 TBC1D8O95759 1140 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 CASP1P29466 404 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 TBC1D9BQ66K14 1250 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 SEC31BQ9NQW1 1179 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 CDK11BP21127 795 aaKnown RBP16.3■□□□□ 0.2
PRAME-214ENST00000543184 IL15P40933 162 aaPredicted RBP16.3■□□□□ 0.2
PRAME-214ENST00000543184 DHX58Q96C10 678 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 LZTFL1Q9NQ48 299 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 SAMSN1Q9NSI8 373 aaKnown RBP16.3■□□□□ 0.2
PRAME-214ENST00000543184 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
PRAME-214ENST00000543184 CEP126Q9P2H0 1117 aa16.3■□□□□ 0.2
PRAME-214ENST00000543184 CASQ1P31415 396 aa16.29■□□□□ 0.2
PRAME-214ENST00000543184 PTPAQ15257 358 aa16.29■□□□□ 0.2
PRAME-214ENST00000543184 TAF3Q5VWG9 929 aa16.29■□□□□ 0.2
PRAME-214ENST00000543184 GIGYF2Q6Y7W6 1299 aaKnown RBP16.29■□□□□ 0.2
PRAME-214ENST00000543184 PUF60Q9UHX1 559 aaKnown RBP16.29■□□□□ 0.2
PRAME-214ENST00000543184 KCNJ14Q9UNX9 436 aa16.29■□□□□ 0.2
PRAME-214ENST00000543184 GUCY1A2P33402 732 aa16.29■□□□□ 0.2
PRAME-214ENST00000543184 METAP2P50579 478 aaKnown RBP eCLIP16.29■□□□□ 0.2
PRAME-214ENST00000543184 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
PRAME-214ENST00000543184 BAG1Q99933 345 aaPredicted RBP16.29■□□□□ 0.2
PRAME-214ENST00000543184 PHLPP2Q6ZVD8 1323 aa16.29■□□□□ 0.2
PRAME-214ENST00000543184 RFX7Q2KHR2 1363 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 TCIRG1Q13488 830 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 OLFM4Q6UX06 510 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 USP49Q70CQ1 688 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
PRAME-214ENST00000543184 ZKSCAN3Q9BRR0 538 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 PARD6BQ9BYG5 372 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 MRPL44Q9H9J2 332 aaKnown RBP16.28■□□□□ 0.2
PRAME-214ENST00000543184 TRMT112Q9UI30 125 aaKnown RBP16.28■□□□□ 0.2
PRAME-214ENST00000543184 TUBE1Q9UJT0 475 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 IKBKBO14920 756 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 RANBP6O60518 1105 aaKnown RBP16.28■□□□□ 0.2
PRAME-214ENST00000543184 STX17P56962 302 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 PPP2R3AQ06190 1150 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 CC2D1AQ6P1N0 951 aaPredicted RBP16.28■□□□□ 0.2
PRAME-214ENST00000543184 SUGCTQ9HAC7 445 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 ARGLU1Q9NWB6 273 aaPredicted RBP16.28■□□□□ 0.2
PRAME-214ENST00000543184 KCNH3Q9ULD8 1083 aa16.28■□□□□ 0.2
PRAME-214ENST00000543184 SOWAHDA6NJG2 315 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 DHX16O60231 1041 aaKnown RBP16.27■□□□□ 0.2
PRAME-214ENST00000543184 LRRFIP1Q32MZ4 808 aaKnown RBP16.27■□□□□ 0.2
PRAME-214ENST00000543184 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 CCDC158Q5M9N0 1113 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 SUSD4Q5VX71 490 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 KLHL10Q6JEL2 608 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 NFXL1Q6ZNB6 911 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 MAP3K14Q99558 947 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 HPSEQ9Y251 543 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 NFE2L3Q9Y4A8 694 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 CNTNAP4Q9C0A0 1308 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 BTBD18B2RXH4 712 aa16.27■□□□□ 0.2
PRAME-214ENST00000543184 SMC1AQ14683 1233 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms