RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 G3BP1Q13283 466 aaKnown RBP eCLIP19.08■□□□□ 0.64
CSF1R-209ENST00000543093 FTSJ3Q8IY81 847 aaKnown RBP19.08■□□□□ 0.64
CSF1R-209ENST00000543093 AGTPBP1Q9UPW5 1226 aa19.08■□□□□ 0.64
CSF1R-209ENST00000543093 COL2A1P02458 1487 aaPredicted RBP19.08■□□□□ 0.64
CSF1R-209ENST00000543093 CEP290O15078 2479 aa19.08■□□□□ 0.64
CSF1R-209ENST00000543093 MAST2Q6P0Q8 1798 aa19.07■□□□□ 0.64
CSF1R-209ENST00000543093 MAP4K4O95819 1239 aaPredicted RBP19.07■□□□□ 0.64
CSF1R-209ENST00000543093 ELNP15502 786 aa19.07■□□□□ 0.64
CSF1R-209ENST00000543093 MCAMP43121 646 aa19.07■□□□□ 0.64
CSF1R-209ENST00000543093 TREML2Q5T2D2 321 aa19.07■□□□□ 0.64
CSF1R-209ENST00000543093 OSBPL5Q9H0X9 879 aaPredicted RBP19.07■□□□□ 0.64
CSF1R-209ENST00000543093 UNC93B1Q9H1C4 597 aa19.07■□□□□ 0.64
CSF1R-209ENST00000543093 UQCRFS1P1P0C7P4 283 aa19.06■□□□□ 0.64
CSF1R-209ENST00000543093 SPP2Q13103 211 aa19.06■□□□□ 0.64
CSF1R-209ENST00000543093 UBE2Q1Q7Z7E8 422 aa19.06■□□□□ 0.64
CSF1R-209ENST00000543093 TEX11Q8IYF3 940 aa19.06■□□□□ 0.64
CSF1R-209ENST00000543093 TMEM57Q8N5G2 664 aa19.06■□□□□ 0.64
CSF1R-209ENST00000543093 ANKRD13CQ8N6S4 541 aa19.06■□□□□ 0.64
CSF1R-209ENST00000543093 U2AF1L4Q8WU68 220 aaKnown RBP19.06■□□□□ 0.64
CSF1R-209ENST00000543093 LRP2BPQ9P2M1 347 aa19.06■□□□□ 0.64
CSF1R-209ENST00000543093 CDK5RAP2Q96SN8 1893 aa19.05■□□□□ 0.64
CSF1R-209ENST00000543093 DOCK3Q8IZD9 2030 aa19.05■□□□□ 0.64
CSF1R-209ENST00000543093 SIPA1L1O43166 1804 aa19.05■□□□□ 0.64
CSF1R-209ENST00000543093 CHRDL2Q6WN34 429 aa19.05■□□□□ 0.64
CSF1R-209ENST00000543093 HTATIP2Q9BUP3 242 aa19.05■□□□□ 0.64
CSF1R-209ENST00000543093 PNMA3Q9UL41 463 aa19.05■□□□□ 0.64
CSF1R-209ENST00000543093 TAOK2Q9UL54 1235 aa19.05■□□□□ 0.64
CSF1R-209ENST00000543093 INHAP05111 366 aa19.04■□□□□ 0.64
CSF1R-209ENST00000543093 IRF5Q13568 498 aa19.04■□□□□ 0.64
CSF1R-209ENST00000543093 RRP1BQ14684 758 aaKnown RBP19.04■□□□□ 0.64
CSF1R-209ENST00000543093 PROCA1Q8NCQ7 364 aaPredicted RBP19.04■□□□□ 0.64
CSF1R-209ENST00000543093 ZNF280CQ8ND82 737 aa19.04■□□□□ 0.64
CSF1R-209ENST00000543093 PXYLP1Q8TE99 480 aa19.04■□□□□ 0.64
CSF1R-209ENST00000543093 SH3RF3Q8TEJ3 882 aaPredicted RBP19.04■□□□□ 0.64
CSF1R-209ENST00000543093 NOL10Q9BSC4 688 aaKnown RBP19.04■□□□□ 0.64
CSF1R-209ENST00000543093 MYO5AQ9Y4I1 1855 aaKnown RBP19.03■□□□□ 0.64
CSF1R-209ENST00000543093 FOCADQ5VW36 1801 aa19.03■□□□□ 0.64
CSF1R-209ENST00000543093 FARP2O94887 1054 aaPredicted RBP19.03■□□□□ 0.64
CSF1R-209ENST00000543093 SGPL1O95470 568 aa19.03■□□□□ 0.64
CSF1R-209ENST00000543093 CAP2P40123 477 aa19.03■□□□□ 0.64
CSF1R-209ENST00000543093 HMGCS2P54868 508 aa19.03■□□□□ 0.64
CSF1R-209ENST00000543093 COA7Q96BR5 231 aa19.03■□□□□ 0.64
CSF1R-209ENST00000543093 SNRKQ9NRH2 765 aa19.03■□□□□ 0.64
CSF1R-209ENST00000543093 USP17L5A8MUK1 530 aa19.02■□□□□ 0.64
CSF1R-209ENST00000543093 FAM110CQ1W6H9 321 aa19.02■□□□□ 0.64
CSF1R-209ENST00000543093 TTC39AQ5SRH9 613 aa19.02■□□□□ 0.64
CSF1R-209ENST00000543093 ITPRIPQ8IWB1 547 aa19.02■□□□□ 0.64
CSF1R-209ENST00000543093 TBC1D2Q9BYX2 928 aa19.02■□□□□ 0.64
CSF1R-209ENST00000543093 AATFQ9NY61 560 aaKnown RBP eCLIP19.02■□□□□ 0.64
CSF1R-209ENST00000543093 HERC5Q9UII4 1024 aaKnown RBP19.02■□□□□ 0.64
CSF1R-209ENST00000543093 TRIOBPQ9H2D6 2365 aa19.01■□□□□ 0.63
CSF1R-209ENST00000543093 PABPC4Q13310 644 aaKnown RBP eCLIP19.01■□□□□ 0.63
CSF1R-209ENST00000543093 OS9Q13438 667 aaPredicted RBP19.01■□□□□ 0.63
CSF1R-209ENST00000543093 TNNI3KQ59H18 835 aa19.01■□□□□ 0.63
CSF1R-209ENST00000543093 NAA16Q6N069 864 aaPredicted RBP19.01■□□□□ 0.63
CSF1R-209ENST00000543093 DEFB118Q96PH6 123 aa19.01■□□□□ 0.63
CSF1R-209ENST00000543093 DBNDD2Q9BQY9 259 aa19.01■□□□□ 0.63
CSF1R-209ENST00000543093 AS3MTQ9HBK9 375 aa19.01■□□□□ 0.63
CSF1R-209ENST00000543093 FPGT-TNNI3KV9GXZ4 949 aa19.01■□□□□ 0.63
CSF1R-209ENST00000543093 BAG3O95817 575 aa19■□□□□ 0.63
CSF1R-209ENST00000543093 TFRCP02786 760 aaKnown RBP19■□□□□ 0.63
CSF1R-209ENST00000543093 GCLCP48506 637 aaPredicted RBP19■□□□□ 0.63
CSF1R-209ENST00000543093 POLA2Q14181 598 aa19■□□□□ 0.63
CSF1R-209ENST00000543093 CCDC158Q5M9N0 1113 aa19■□□□□ 0.63
CSF1R-209ENST00000543093 GPR108Q9NPR9 543 aa19■□□□□ 0.63
CSF1R-209ENST00000543093 RBM27Q9P2N5 1060 aaKnown RBP19■□□□□ 0.63
CSF1R-209ENST00000543093 PI4KBQ9UBF8 816 aa19■□□□□ 0.63
CSF1R-209ENST00000543093 PLCG2P16885 1265 aa18.99■□□□□ 0.63
CSF1R-209ENST00000543093 SH3D19Q5HYK7 790 aa18.99■□□□□ 0.63
CSF1R-209ENST00000543093 MAPKAPK5Q8IW41 473 aa18.99■□□□□ 0.63
CSF1R-209ENST00000543093 TGFBRAP1Q8WUH2 860 aa18.99■□□□□ 0.63
CSF1R-209ENST00000543093 ASCC2Q9H1I8 757 aaPredicted RBP18.99■□□□□ 0.63
CSF1R-209ENST00000543093 DHX36Q9H2U1 1008 aaKnown RBP18.99■□□□□ 0.63
CSF1R-209ENST00000543093 PAK6Q9NQU5 681 aaPredicted RBP18.99■□□□□ 0.63
CSF1R-209ENST00000543093 NR2E3Q9Y5X4 410 aa18.99■□□□□ 0.63
CSF1R-209ENST00000543093 PLXNB2O15031 1838 aa18.98■□□□□ 0.63
CSF1R-209ENST00000543093 CYP2E1P05181 493 aaPredicted RBP18.98■□□□□ 0.63
CSF1R-209ENST00000543093 RLBP1P12271 317 aa18.98■□□□□ 0.63
CSF1R-209ENST00000543093 ADGRA1Q86SQ6 560 aa18.98■□□□□ 0.63
CSF1R-209ENST00000543093 C1orf115Q9H7X2 142 aa18.98■□□□□ 0.63
CSF1R-209ENST00000543093 FLT1P17948 1338 aa18.98■□□□□ 0.63
CSF1R-209ENST00000543093 ZBTB7BO15156 539 aaPredicted RBP18.97■□□□□ 0.63
CSF1R-209ENST00000543093 SURF6O75683 361 aaKnown RBP18.97■□□□□ 0.63
CSF1R-209ENST00000543093 PPP4CP60510 307 aa18.97■□□□□ 0.63
CSF1R-209ENST00000543093 ATP8B2P98198 1209 aa18.97■□□□□ 0.63
CSF1R-209ENST00000543093 MTMR2Q13614 643 aa18.97■□□□□ 0.63
CSF1R-209ENST00000543093 SSH3Q8TE77 659 aa18.97■□□□□ 0.63
CSF1R-209ENST00000543093 WDR18Q9BV38 432 aa18.97■□□□□ 0.63
CSF1R-209ENST00000543093 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.97■□□□□ 0.63
CSF1R-209ENST00000543093 ALPK3Q96L96 1907 aa18.96■□□□□ 0.63
CSF1R-209ENST00000543093 ASNSP08243 561 aa18.96■□□□□ 0.63
CSF1R-209ENST00000543093 MS4A1P11836 297 aa18.96■□□□□ 0.63
CSF1R-209ENST00000543093 CAPN2P17655 700 aa18.96■□□□□ 0.63
CSF1R-209ENST00000543093 ZAP70P43403 619 aa18.96■□□□□ 0.63
CSF1R-209ENST00000543093 BACE1P56817 501 aa18.96■□□□□ 0.63
CSF1R-209ENST00000543093 JAG1P78504 1218 aa18.96■□□□□ 0.63
CSF1R-209ENST00000543093 CRACR2BQ8N4Y2 399 aaPredicted RBP18.96■□□□□ 0.63
CSF1R-209ENST00000543093 TRIM34Q9BYJ4 488 aa18.96■□□□□ 0.63
CSF1R-209ENST00000543093 CRISPLD2Q9H0B8 497 aa18.96■□□□□ 0.63
CSF1R-209ENST00000543093 DNAJC18Q9H819 358 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms