RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CFAP157Q5JU67 520 aa14.64□□□□□ -0.07
TNC-212ENST00000542877 APBB1IPQ7Z5R6 666 aaPredicted RBP14.64□□□□□ -0.07
TNC-212ENST00000542877 RPGRIP1Q96KN7 1286 aa14.64□□□□□ -0.07
TNC-212ENST00000542877 ARL1P40616 181 aaPredicted RBP14.64□□□□□ -0.07
TNC-212ENST00000542877 IRX3P78415 501 aaPredicted RBP14.64□□□□□ -0.07
TNC-212ENST00000542877 ZNF790Q6PG37 636 aa14.64□□□□□ -0.07
TNC-212ENST00000542877 CCDC51Q96ER9 411 aa14.64□□□□□ -0.07
TNC-212ENST00000542877 ARMT1Q9H993 441 aa14.64□□□□□ -0.07
TNC-212ENST00000542877 NSFL1CQ9UNZ2 370 aaKnown RBP14.64□□□□□ -0.07
TNC-212ENST00000542877 YTHDC2Q9H6S0 1430 aaKnown RBP14.64□□□□□ -0.07
TNC-212ENST00000542877 SBNO1A3KN83 1393 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 PNMA6EA0A0J9YXQ4 647 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 CIB2O75838 187 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 ITGA6P23229 1130 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 OTUD7BQ6GQQ9 843 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 ZNF354CQ86Y25 554 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 MAK16Q9BXY0 300 aaKnown RBP14.63□□□□□ -0.07
TNC-212ENST00000542877 FYB2Q5VWT5 728 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 MKRN1Q9UHC7 482 aaKnown RBP14.63□□□□□ -0.07
TNC-212ENST00000542877 EDC4Q6P2E9 1401 aaKnown RBP14.63□□□□□ -0.07
TNC-212ENST00000542877 ZNF500O60304 480 aaPredicted RBP14.63□□□□□ -0.07
TNC-212ENST00000542877 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
TNC-212ENST00000542877 MTX1Q13505 466 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 FAM212AQ96EL1 285 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 DDX23Q9BUQ8 820 aaKnown RBP14.63□□□□□ -0.07
TNC-212ENST00000542877 MAPK8IP1Q9UQF2 711 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 CCNT1O60563 726 aaKnown RBP14.63□□□□□ -0.07
TNC-212ENST00000542877 DSCC1Q9BVC3 393 aa14.63□□□□□ -0.07
TNC-212ENST00000542877 USP19O94966 1318 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 OAS2P29728 719 aaKnown RBP14.62□□□□□ -0.07
TNC-212ENST00000542877 CCDC84Q86UT8 332 aaPredicted RBP14.62□□□□□ -0.07
TNC-212ENST00000542877 FCHSD1Q86WN1 690 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 TMEM87AQ8NBN3 555 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 TAB2Q9NYJ8 693 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 WDR7Q9Y4E6 1490 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 PSMC4P43686 418 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 CFAP221Q4G0U5 840 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 KRT25Q7Z3Z0 450 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 WWC3Q9ULE0 1092 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 NAA25Q14CX7 972 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 PARP10Q53GL7 1025 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 ADALQ6DHV7 355 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 ZNF365Q70YC5 407 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 TAOK1Q7L7X3 1001 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 NUCKS1Q9H1E3 243 aaKnown RBP14.62□□□□□ -0.07
TNC-212ENST00000542877 MTMR3Q13615 1198 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 FNBP1Q96RU3 617 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 CFAP43Q8NDM7 1665 aa14.62□□□□□ -0.07
TNC-212ENST00000542877 NOL3O60936 208 aaKnown RBP14.61□□□□□ -0.07
TNC-212ENST00000542877 BRD3Q15059 726 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 DPH6Q7L8W6 267 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 TEX11Q8IYF3 940 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 FAM89AQ96GI7 184 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.61□□□□□ -0.07
TNC-212ENST00000542877 TRAPPC8Q9Y2L5 1435 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 KRT5P13647 590 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 NONOQ15233 471 aaKnown RBP eCLIP14.61□□□□□ -0.07
TNC-212ENST00000542877 CERS3Q8IU89 383 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 SYCE1Q8N0S2 351 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 EYA3Q99504 573 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 XPO4Q9C0E2 1151 aaKnown RBP14.61□□□□□ -0.07
TNC-212ENST00000542877 STX10O60499 249 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 AKNAD1Q5T1N1 836 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 LIN9Q5TKA1 542 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 SUCLG2Q96I99 432 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 BCL2L12Q9HB09 334 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 ZBTB21Q9ULJ3 1066 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 KIAA0232Q92628 1395 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 JAK2O60674 1132 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 TXKP42681 527 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 SMTNP53814 917 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 CACNA2D3Q8IZS8 1091 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 KLHDC4Q8TBB5 520 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 NELFBQ8WX92 580 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 PDE8AO60658 829 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 SH2D4AQ9H788 454 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 LRWD1Q9UFC0 647 aa14.61□□□□□ -0.07
TNC-212ENST00000542877 IBTKQ9P2D0 1353 aaPredicted RBP14.6□□□□□ -0.07
TNC-212ENST00000542877 BIRC3Q13489 604 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 RTCBQ9Y3I0 505 aaKnown RBP14.6□□□□□ -0.07
TNC-212ENST00000542877 RNASE9P60153 205 aaKnown RBP14.6□□□□□ -0.07
TNC-212ENST00000542877 LMNTD2Q8IXW0 634 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 CABS1Q96KC9 395 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 SLF1Q9BQI6 1058 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 LZTS2Q9BRK4 669 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 CEP104O60308 925 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 FLOT1O75955 427 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 KIAA1468Q9P260 1216 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 SH3TC1Q8TE82 1336 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 PZPP20742 1482 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 NEDD9Q14511 834 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 ME3Q16798 604 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 WHAMMP3Q1A5X7 153 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 EXOC7Q9UPT5 735 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 AGTPBP1Q9UPW5 1226 aa14.6□□□□□ -0.07
TNC-212ENST00000542877 BACH1O14867 736 aa14.59□□□□□ -0.07
TNC-212ENST00000542877 ATP5JP18859 108 aa14.59□□□□□ -0.07
TNC-212ENST00000542877 E7EWF7 191 aa14.59□□□□□ -0.07
TNC-212ENST00000542877 HIBADHP31937 336 aaKnown RBP14.59□□□□□ -0.07
TNC-212ENST00000542877 MYSM1Q5VVJ2 828 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms