RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 FUT2Q10981 343 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 ZSCAN10Q96SZ4 725 aaPredicted RBP16.48■□□□□ 0.23
LDB3-207ENST00000542786 MRVI1Q9Y6F6 885 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 EP400Q96L91 3159 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 UFL1O94874 794 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 POLR3DP05423 398 aaPredicted RBP16.48■□□□□ 0.23
LDB3-207ENST00000542786 GUCY1A2P33402 732 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 CAMK4Q16566 473 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 DZIP1Q86YF9 867 aaKnown RBP16.48■□□□□ 0.23
LDB3-207ENST00000542786 CCAR1Q8IX12 1150 aaKnown RBP16.48■□□□□ 0.23
LDB3-207ENST00000542786 CRACR2BQ8N4Y2 399 aaPredicted RBP16.48■□□□□ 0.23
LDB3-207ENST00000542786 FANCBQ8NB91 859 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 UBAC1Q9BSL1 405 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 TNMDQ9H2S6 317 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 CD209Q9NNX6 404 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 PCDHA7Q9UN72 937 aa16.48■□□□□ 0.23
LDB3-207ENST00000542786 DDX60LQ5H9U9 1706 aaKnown RBP16.48■□□□□ 0.23
LDB3-207ENST00000542786 ROBO3Q96MS0 1386 aa16.47■□□□□ 0.23
LDB3-207ENST00000542786 A0A1W2PQ27 194 aa16.47■□□□□ 0.23
LDB3-207ENST00000542786 A0A1W2PQ64 194 aa16.47■□□□□ 0.23
LDB3-207ENST00000542786 A0A1W2PQD8 194 aa16.47■□□□□ 0.23
LDB3-207ENST00000542786 LDHBP07195 334 aaKnown RBP16.47■□□□□ 0.23
LDB3-207ENST00000542786 TYRO3Q06418 890 aa16.47■□□□□ 0.23
LDB3-207ENST00000542786 SSRP1Q08945 709 aaKnown RBP16.47■□□□□ 0.23
LDB3-207ENST00000542786 HS1BP3Q53T59 392 aa16.47■□□□□ 0.23
LDB3-207ENST00000542786 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
LDB3-207ENST00000542786 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
LDB3-207ENST00000542786 SLC26A6Q9BXS9 759 aa16.47■□□□□ 0.23
LDB3-207ENST00000542786 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
LDB3-207ENST00000542786 POLLQ9UGP5 575 aa16.47■□□□□ 0.23
LDB3-207ENST00000542786 GGA1Q9UJY5 639 aa16.47■□□□□ 0.23
LDB3-207ENST00000542786 TNS1Q9HBL0 1735 aaKnown RBP16.47■□□□□ 0.23
LDB3-207ENST00000542786 ERICH2A1L162 156 aa16.46■□□□□ 0.23
LDB3-207ENST00000542786 ESPNB1AK53 854 aa16.46■□□□□ 0.23
LDB3-207ENST00000542786 CCDC192P0DO97 292 aa16.46■□□□□ 0.23
LDB3-207ENST00000542786 HMGB2P26583 209 aaKnown RBP16.46■□□□□ 0.23
LDB3-207ENST00000542786 TBC1D16Q8TBP0 767 aa16.46■□□□□ 0.23
LDB3-207ENST00000542786 COL11A2P13942 1736 aaPredicted RBP16.46■□□□□ 0.23
LDB3-207ENST00000542786 PRDM1O75626 825 aa16.46■□□□□ 0.22
LDB3-207ENST00000542786 DIXDC1Q155Q3 683 aa16.46■□□□□ 0.22
LDB3-207ENST00000542786 AXDND1Q5T1B0 1012 aaPredicted RBP16.46■□□□□ 0.22
LDB3-207ENST00000542786 ANO1Q5XXA6 986 aa16.46■□□□□ 0.22
LDB3-207ENST00000542786 ZNF772Q68DY9 489 aaPredicted RBP16.46■□□□□ 0.22
LDB3-207ENST00000542786 ADALQ6DHV7 355 aa16.46■□□□□ 0.22
LDB3-207ENST00000542786 TMC4Q7Z404 712 aa16.46■□□□□ 0.22
LDB3-207ENST00000542786 KCNG4Q8TDN1 519 aa16.46■□□□□ 0.22
LDB3-207ENST00000542786 SHISA4Q96DD7 197 aa16.46■□□□□ 0.22
LDB3-207ENST00000542786 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.46■□□□□ 0.22
LDB3-207ENST00000542786 RTFDC1Q9BY42 306 aaPredicted RBP16.46■□□□□ 0.22
LDB3-207ENST00000542786 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
LDB3-207ENST00000542786 CCDC196A0A1B0GTZ2 297 aa16.45■□□□□ 0.22
LDB3-207ENST00000542786 GSTO1P78417 241 aa16.45■□□□□ 0.22
LDB3-207ENST00000542786 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
LDB3-207ENST00000542786 TROAPQ12815 778 aa16.45■□□□□ 0.22
LDB3-207ENST00000542786 PPP2R5BQ15173 497 aa16.45■□□□□ 0.22
LDB3-207ENST00000542786 CKAP2LQ8IYA6 745 aa16.45■□□□□ 0.22
LDB3-207ENST00000542786 FMR1NBQ8N0W7 255 aaPredicted RBP16.45■□□□□ 0.22
LDB3-207ENST00000542786 SH3RF3Q8TEJ3 882 aaPredicted RBP16.45■□□□□ 0.22
LDB3-207ENST00000542786 MAP3K14Q99558 947 aa16.45■□□□□ 0.22
LDB3-207ENST00000542786 CDK5RAP2Q96SN8 1893 aa16.45■□□□□ 0.22
LDB3-207ENST00000542786 NAV1Q8NEY1 1877 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 ME1P48163 572 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 PTPAQ15257 358 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 C12orf60Q5U649 245 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 SP8Q8IXZ3 490 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 FSIP1Q8NA03 581 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 WASF1Q92558 559 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 RGPD3A6NKT7 1758 aaPredicted RBP16.44■□□□□ 0.22
LDB3-207ENST00000542786 RGPD4Q7Z3J3 1758 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 FAM205AQ6ZU69 1335 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 SPTLC2O15270 562 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 MMP1P03956 469 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 USP17L8P0C7I0 530 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 SLC39A14Q15043 492 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 STK38Q15208 465 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 NLGN1Q8N2Q7 840 aa16.44■□□□□ 0.22
LDB3-207ENST00000542786 TRIM44Q96DX7 344 aaPredicted RBP16.44■□□□□ 0.22
LDB3-207ENST00000542786 AP5Z1O43299 807 aa16.43■□□□□ 0.22
LDB3-207ENST00000542786 DDAH1O94760 285 aa16.43■□□□□ 0.22
LDB3-207ENST00000542786 DEXIO95424 95 aa16.43■□□□□ 0.22
LDB3-207ENST00000542786 PKN1Q16512 942 aa16.43■□□□□ 0.22
LDB3-207ENST00000542786 RCSD1Q6JBY9 416 aa16.43■□□□□ 0.22
LDB3-207ENST00000542786 CMTR1Q8N1G2 835 aaKnown RBP16.43■□□□□ 0.22
LDB3-207ENST00000542786 FAM200AQ8TCP9 573 aa16.43■□□□□ 0.22
LDB3-207ENST00000542786 MRPS27Q92552 414 aaKnown RBP16.43■□□□□ 0.22
LDB3-207ENST00000542786 RNF26Q9BY78 433 aaPredicted RBP16.43■□□□□ 0.22
LDB3-207ENST00000542786 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
LDB3-207ENST00000542786 GPR75-ASB3A0A0A6YYF3 556 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 PPEF1O14829 653 aaPredicted RBP16.42■□□□□ 0.22
LDB3-207ENST00000542786 SRGNP10124 158 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 IFIT1BQ5T764 474 aaKnown RBP16.42■□□□□ 0.22
LDB3-207ENST00000542786 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 IQCA1Q86XH1 822 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 TRIM22Q8IYM9 498 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 NUP133Q8WUM0 1156 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 FAM163AQ96GL9 167 aaPredicted RBP16.42■□□□□ 0.22
LDB3-207ENST00000542786 MCM9Q9NXL9 1143 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.42■□□□□ 0.22
LDB3-207ENST00000542786 USP25Q9UHP3 1055 aa16.42■□□□□ 0.22
LDB3-207ENST00000542786 GAKO14976 1311 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms