RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 CT47B1P0C2W7 299 aaPredicted RBP11.06□□□□□ -0.64
UBC-211ENST00000542416 CAP2P40123 477 aa11.06□□□□□ -0.64
UBC-211ENST00000542416 IRX3P78415 501 aaPredicted RBP11.06□□□□□ -0.64
UBC-211ENST00000542416 SH3D19Q5HYK7 790 aa11.06□□□□□ -0.64
UBC-211ENST00000542416 TREML2Q5T2D2 321 aa11.06□□□□□ -0.64
UBC-211ENST00000542416 C7orf61Q8IZ16 206 aa11.06□□□□□ -0.64
UBC-211ENST00000542416 SOCS4Q8WXH5 440 aa11.06□□□□□ -0.64
UBC-211ENST00000542416 API5Q9BZZ5 524 aaKnown RBP11.06□□□□□ -0.64
UBC-211ENST00000542416 C11orf49Q9H6J7 331 aa11.06□□□□□ -0.64
UBC-211ENST00000542416 SMC4Q9NTJ3 1288 aa11.06□□□□□ -0.64
UBC-211ENST00000542416 GJD2Q9UKL4 321 aa11.06□□□□□ -0.64
UBC-211ENST00000542416 OGDHLQ9ULD0 1010 aa11.06□□□□□ -0.64
UBC-211ENST00000542416 XRCC5P13010 732 aaKnown RBP11.05□□□□□ -0.64
UBC-211ENST00000542416 HMGCS2P54868 508 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 RHBDL3P58872 404 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 TIMM10P62072 90 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 MECOMQ03112 1051 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 TDHQ8IZJ6 230 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 DEFB123Q8N688 67 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 DIS3LQ8TF46 1054 aaKnown RBP11.05□□□□□ -0.64
UBC-211ENST00000542416 GTF3C2Q8WUA4 911 aaPredicted RBP11.05□□□□□ -0.64
UBC-211ENST00000542416 NUDT12Q9BQG2 462 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 NOL10Q9BSC4 688 aaKnown RBP11.05□□□□□ -0.64
UBC-211ENST00000542416 ASCC2Q9H1I8 757 aaPredicted RBP11.05□□□□□ -0.64
UBC-211ENST00000542416 DHX36Q9H2U1 1008 aaKnown RBP11.05□□□□□ -0.64
UBC-211ENST00000542416 GINM1Q9NU53 330 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 TMOD4Q9NZQ9 345 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 PI4KBQ9UBF8 816 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 MORF4L1Q9UBU8 362 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 STXBP5LQ9Y2K9 1186 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 CUL9Q8IWT3 2517 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 LAMA3Q16787 3333 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 ZSWIM8A7E2V4 1837 aa11.05□□□□□ -0.64
UBC-211ENST00000542416 A0A1B0GUL7 405 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 C19orf81C9J6K1 198 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 ASNSP08243 561 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 PLCG2P16885 1265 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 ADORA1P30542 326 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 MAPK4P31152 587 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 HOXA7P31268 230 aaPredicted RBP11.04□□□□□ -0.64
UBC-211ENST00000542416 PDE3AQ14432 1141 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 GORABQ5T7V8 394 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 CCAR1Q8IX12 1150 aaKnown RBP11.04□□□□□ -0.64
UBC-211ENST00000542416 GPRC5AQ8NFJ5 357 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 XAGE2Q96GT9 111 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 WDR18Q9BV38 432 aa11.04□□□□□ -0.64
UBC-211ENST00000542416 UBE2OQ9C0C9 1292 aaKnown RBP11.04□□□□□ -0.64
UBC-211ENST00000542416 ZMYND8Q9ULU4 1186 aaPredicted RBP11.04□□□□□ -0.64
UBC-211ENST00000542416 PA2G4Q9UQ80 394 aaKnown RBP11.04□□□□□ -0.64
UBC-211ENST00000542416 COL2A1P02458 1487 aaPredicted RBP11.04□□□□□ -0.64
UBC-211ENST00000542416 IGSF3O75054 1194 aa11.03□□□□□ -0.64
UBC-211ENST00000542416 BAG3O95817 575 aa11.03□□□□□ -0.64
UBC-211ENST00000542416 GNAI3P08754 354 aa11.03□□□□□ -0.64
UBC-211ENST00000542416 MAGEA10P43363 369 aaPredicted RBP11.03□□□□□ -0.64
UBC-211ENST00000542416 BACE1P56817 501 aa11.03□□□□□ -0.64
UBC-211ENST00000542416 SLFN5Q08AF3 891 aa11.03□□□□□ -0.64
UBC-211ENST00000542416 MAP3K21Q5TCX8 1036 aa11.03□□□□□ -0.64
UBC-211ENST00000542416 CCDC84Q86UT8 332 aaPredicted RBP11.03□□□□□ -0.64
UBC-211ENST00000542416 SPATA5Q8NB90 893 aa11.03□□□□□ -0.64
UBC-211ENST00000542416 NSUN4Q96CB9 384 aaKnown RBP11.03□□□□□ -0.64
UBC-211ENST00000542416 TRIM34Q9BYJ4 488 aa11.03□□□□□ -0.64
UBC-211ENST00000542416 RAI14Q9P0K7 980 aa11.03□□□□□ -0.64
UBC-211ENST00000542416 USP17L10C9JJH3 530 aa11.02□□□□□ -0.65
UBC-211ENST00000542416 UQCRFS1P1P0C7P4 283 aa11.02□□□□□ -0.65
UBC-211ENST00000542416 PRKAR2AP13861 404 aaKnown RBP11.02□□□□□ -0.65
UBC-211ENST00000542416 ZKSCAN1P17029 563 aaPredicted RBP11.02□□□□□ -0.65
UBC-211ENST00000542416 CYP2B6P20813 491 aa11.02□□□□□ -0.65
UBC-211ENST00000542416 ATF7IPQ6VMQ6 1270 aa11.02□□□□□ -0.65
UBC-211ENST00000542416 FOXP4Q8IVH2 680 aaPredicted RBP11.02□□□□□ -0.65
UBC-211ENST00000542416 TEX11Q8IYF3 940 aa11.02□□□□□ -0.65
UBC-211ENST00000542416 TRIB2Q92519 343 aa11.02□□□□□ -0.65
UBC-211ENST00000542416 NEUROD6Q96NK8 337 aa11.02□□□□□ -0.65
UBC-211ENST00000542416 HMG20BQ9P0W2 317 aa11.02□□□□□ -0.65
UBC-211ENST00000542416 LRP2BPQ9P2M1 347 aa11.02□□□□□ -0.65
UBC-211ENST00000542416 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.02□□□□□ -0.65
UBC-211ENST00000542416 FAM196BA6NMK8 535 aa11.01□□□□□ -0.65
UBC-211ENST00000542416 SRGAP3O43295 1099 aa11.01□□□□□ -0.65
UBC-211ENST00000542416 GLRX3O76003 335 aaKnown RBP11.01□□□□□ -0.65
UBC-211ENST00000542416 SLURP2P0DP57 97 aa11.01□□□□□ -0.65
UBC-211ENST00000542416 SYN1P17600 705 aa11.01□□□□□ -0.65
UBC-211ENST00000542416 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
UBC-211ENST00000542416 RGS2P41220 211 aa11.01□□□□□ -0.65
UBC-211ENST00000542416 HERVK_113P62684 666 aa11.01□□□□□ -0.65
UBC-211ENST00000542416 TFCP2Q12800 502 aa11.01□□□□□ -0.65
UBC-211ENST00000542416 MTX1Q13505 466 aa11.01□□□□□ -0.65
UBC-211ENST00000542416 MTMR2Q13614 643 aa11.01□□□□□ -0.65
UBC-211ENST00000542416 P2RX7Q99572 595 aaKnown RBP11.01□□□□□ -0.65
UBC-211ENST00000542416 MTMR10Q9NXD2 777 aa11.01□□□□□ -0.65
UBC-211ENST00000542416 NOB1Q9ULX3 412 aaKnown RBP11.01□□□□□ -0.65
UBC-211ENST00000542416 AK9Q5TCS8 1911 aa11□□□□□ -0.65
UBC-211ENST00000542416 CCNA1P78396 465 aa11□□□□□ -0.65
UBC-211ENST00000542416 TRIM32Q13049 653 aa11□□□□□ -0.65
UBC-211ENST00000542416 FAM109BQ6ICB4 259 aaPredicted RBP11□□□□□ -0.65
UBC-211ENST00000542416 CRACR2BQ8N4Y2 399 aaPredicted RBP11□□□□□ -0.65
UBC-211ENST00000542416 ARHGAP45Q92619 1136 aa11□□□□□ -0.65
UBC-211ENST00000542416 CWC22Q9HCG8 908 aaKnown RBP11□□□□□ -0.65
UBC-211ENST00000542416 COL6A3P12111 3177 aa11□□□□□ -0.65
UBC-211ENST00000542416 MSCO60682 206 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 HLA-DOAP06340 250 aa10.99□□□□□ -0.65
UBC-211ENST00000542416 COL6A1P12109 1028 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms