RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 SMC5Q8IY18 1101 aa24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 OTUD7AQ8TE49 926 aaPredicted RBP24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 BRI3BPQ8WY22 251 aa24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 PICK1Q9NRD5 415 aa24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 PALD1Q9ULE6 856 aa24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 FOCADQ5VW36 1801 aa24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 FAM196BA6NMK8 535 aa24.27■■□□□ 1.48
CACNA2D4-215ENST00000542340 GLRX3O76003 335 aaKnown RBP24.27■■□□□ 1.48
CACNA2D4-215ENST00000542340 MX1P20591 662 aa24.27■■□□□ 1.48
CACNA2D4-215ENST00000542340 NOM1Q5C9Z4 860 aaKnown RBP24.27■■□□□ 1.48
CACNA2D4-215ENST00000542340 KBTBD3Q8NAB2 608 aa24.27■■□□□ 1.48
CACNA2D4-215ENST00000542340 PI4K2BQ8TCG2 481 aa24.27■■□□□ 1.48
CACNA2D4-215ENST00000542340 CRNKL1Q9BZJ0 848 aaKnown RBP24.27■■□□□ 1.48
CACNA2D4-215ENST00000542340 SAP30BPQ9UHR5 308 aaKnown RBP24.27■■□□□ 1.48
CACNA2D4-215ENST00000542340 KCNH4Q9UQ05 1017 aa24.27■■□□□ 1.48
CACNA2D4-215ENST00000542340 CDK5RAP2Q96SN8 1893 aa24.27■■□□□ 1.48
CACNA2D4-215ENST00000542340 IGHDP01880 384 aa24.26■■□□□ 1.47
CACNA2D4-215ENST00000542340 HLA-DOAP06340 250 aa24.26■■□□□ 1.47
CACNA2D4-215ENST00000542340 PTPRAP18433 802 aa24.26■■□□□ 1.47
CACNA2D4-215ENST00000542340 SALL3Q9BXA9 1300 aa24.26■■□□□ 1.47
CACNA2D4-215ENST00000542340 SLFNL1Q499Z3 407 aa24.25■■□□□ 1.47
CACNA2D4-215ENST00000542340 CXCL11O14625 94 aa24.24■■□□□ 1.47
CACNA2D4-215ENST00000542340 CAP2P40123 477 aa24.24■■□□□ 1.47
CACNA2D4-215ENST00000542340 TTC6Q86TZ1 520 aa24.24■■□□□ 1.47
CACNA2D4-215ENST00000542340 LCORLQ8N3X6 602 aa24.24■■□□□ 1.47
CACNA2D4-215ENST00000542340 CRACR2BQ8N4Y2 399 aaPredicted RBP24.24■■□□□ 1.47
CACNA2D4-215ENST00000542340 ZHX2Q9Y6X8 837 aa24.24■■□□□ 1.47
CACNA2D4-215ENST00000542340 GPR25O00155 361 aa24.23■■□□□ 1.47
CACNA2D4-215ENST00000542340 MBD4O95243 580 aa24.23■■□□□ 1.47
CACNA2D4-215ENST00000542340 TRIM34Q9BYJ4 488 aa24.23■■□□□ 1.47
CACNA2D4-215ENST00000542340 R3HDMLQ9H3Y0 253 aa24.23■■□□□ 1.47
CACNA2D4-215ENST00000542340 ARMT1Q9H993 441 aa24.23■■□□□ 1.47
CACNA2D4-215ENST00000542340 ZCCHC17Q9NP64 241 aaKnown RBP24.23■■□□□ 1.47
CACNA2D4-215ENST00000542340 STAP2Q9UGK3 403 aa24.23■■□□□ 1.47
CACNA2D4-215ENST00000542340 CASP8AP2Q9UKL3 1982 aa24.23■■□□□ 1.47
CACNA2D4-215ENST00000542340 CHGBP05060 677 aa24.22■■□□□ 1.47
CACNA2D4-215ENST00000542340 EHD4Q9H223 541 aa24.22■■□□□ 1.47
CACNA2D4-215ENST00000542340 DNAJC18Q9H819 358 aa24.22■■□□□ 1.47
CACNA2D4-215ENST00000542340 AFG3L2Q9Y4W6 797 aa24.22■■□□□ 1.47
CACNA2D4-215ENST00000542340 ZFYP08048 801 aaPredicted RBP24.21■■□□□ 1.47
CACNA2D4-215ENST00000542340 IRX6P78412 446 aaPredicted RBP24.21■■□□□ 1.47
CACNA2D4-215ENST00000542340 RRP1BQ14684 758 aaKnown RBP24.21■■□□□ 1.47
CACNA2D4-215ENST00000542340 LRRFIP1Q32MZ4 808 aaKnown RBP24.21■■□□□ 1.47
CACNA2D4-215ENST00000542340 FAM43AQ8N2R8 423 aa24.21■■□□□ 1.47
CACNA2D4-215ENST00000542340 ZNF296Q8WUU4 475 aaPredicted RBP24.21■■□□□ 1.47
CACNA2D4-215ENST00000542340 SERPINB13Q9UIV8 391 aa24.21■■□□□ 1.47
CACNA2D4-215ENST00000542340 SIPA1L1O43166 1804 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 BTBD19C9JJ37 291 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 RNF113AO15541 343 aaKnown RBP24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 PDE1AP54750 535 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 CRHR2Q13324 411 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 SLC4A8Q2Y0W8 1093 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 B4GALNT3Q6L9W6 998 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 SDR42E1Q8WUS8 393 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 TBC1D2Q9BYX2 928 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 LNPKQ9C0E8 428 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 PUS7LQ9H0K6 701 aaKnown RBP24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 DCP1AQ9NPI6 582 aaPredicted RBP24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 ATP8A2Q9NTI2 1148 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 GINM1Q9NU53 330 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 MYH7P12883 1935 aa24.2■■□□□ 1.46
CACNA2D4-215ENST00000542340 DOCK1Q14185 1865 aa24.19■■□□□ 1.46
CACNA2D4-215ENST00000542340 NUCB1Q02818 461 aa24.19■■□□□ 1.46
CACNA2D4-215ENST00000542340 MCM9Q9NXL9 1143 aa24.19■■□□□ 1.46
CACNA2D4-215ENST00000542340 MYH1P12882 1939 aa24.19■■□□□ 1.46
CACNA2D4-215ENST00000542340 PRKAB2O43741 272 aa24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 FKTNO75072 461 aa24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 POLR3DP05423 398 aaPredicted RBP24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 ASNSP08243 561 aa24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 PLCD1P51178 756 aa24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 MOGSQ13724 837 aa24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 TAF1CQ15572 869 aaPredicted RBP24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 ANKRD23Q86SG2 305 aa24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 CHD1LQ86WJ1 897 aa24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 APPBP2Q92624 585 aa24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 ZFYVE28Q9HCC9 887 aa24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.18■■□□□ 1.46
CACNA2D4-215ENST00000542340 A0A0G2JLL6 359 aaPredicted RBP24.17■■□□□ 1.46
CACNA2D4-215ENST00000542340 USP17L5A8MUK1 530 aa24.17■■□□□ 1.46
CACNA2D4-215ENST00000542340 IFFO2Q5TF58 517 aa24.17■■□□□ 1.46
CACNA2D4-215ENST00000542340 TATDN1Q6P1N9 297 aa24.17■■□□□ 1.46
CACNA2D4-215ENST00000542340 FASTKD5Q7L8L6 764 aaKnown RBP24.17■■□□□ 1.46
CACNA2D4-215ENST00000542340 PRRT2Q7Z6L0 340 aaPredicted RBP24.17■■□□□ 1.46
CACNA2D4-215ENST00000542340 CCDC84Q86UT8 332 aaPredicted RBP24.16■■□□□ 1.46
CACNA2D4-215ENST00000542340 OSBP2Q969R2 916 aa24.16■■□□□ 1.46
CACNA2D4-215ENST00000542340 STRBPQ96SI9 672 aaKnown RBP24.16■■□□□ 1.46
CACNA2D4-215ENST00000542340 FSD1Q9BTV5 496 aa24.16■■□□□ 1.46
CACNA2D4-215ENST00000542340 TAOK2Q9UL54 1235 aa24.16■■□□□ 1.46
CACNA2D4-215ENST00000542340 SLC4A4Q9Y6R1 1079 aa24.16■■□□□ 1.46
CACNA2D4-215ENST00000542340 TRIM75PA6NK02 468 aa24.15■■□□□ 1.46
CACNA2D4-215ENST00000542340 DGKZQ13574 1117 aa24.15■■□□□ 1.46
CACNA2D4-215ENST00000542340 CTU1Q7Z7A3 348 aaKnown RBP24.15■■□□□ 1.46
CACNA2D4-215ENST00000542340 ZNF280CQ8ND82 737 aa24.15■■□□□ 1.46
CACNA2D4-215ENST00000542340 DDRGK1Q96HY6 314 aa24.15■■□□□ 1.46
CACNA2D4-215ENST00000542340 AS3MTQ9HBK9 375 aa24.15■■□□□ 1.46
CACNA2D4-215ENST00000542340 DDX60LQ5H9U9 1706 aaKnown RBP24.15■■□□□ 1.46
CACNA2D4-215ENST00000542340 PDHXO00330 501 aa24.14■■□□□ 1.45
CACNA2D4-215ENST00000542340 JAG1P78504 1218 aa24.14■■□□□ 1.45
CACNA2D4-215ENST00000542340 GABPAQ06546 454 aa24.14■■□□□ 1.45
CACNA2D4-215ENST00000542340 SPP2Q13103 211 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms