RNA–Protein interactions for RNA: ENST00000542200.2

AP3B2-209, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2 BASIC

Gene AP3B2, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-209ENST00000542200 CABP5Q9NP86 173 aa11.33□□□□□ -0.6
AP3B2-209ENST00000542200 TFCP2L1Q9NZI6 479 aa11.33□□□□□ -0.6
AP3B2-209ENST00000542200 PTPN21Q16825 1174 aa11.33□□□□□ -0.6
AP3B2-209ENST00000542200 NEMFO60524 1076 aa11.33□□□□□ -0.6
AP3B2-209ENST00000542200 CUTAO60888 179 aa11.33□□□□□ -0.6
AP3B2-209ENST00000542200 DEXIO95424 95 aa11.33□□□□□ -0.6
AP3B2-209ENST00000542200 CRACR2BQ8N4Y2 399 aaPredicted RBP11.33□□□□□ -0.6
AP3B2-209ENST00000542200 OXER1Q8TDS5 423 aa11.33□□□□□ -0.6
AP3B2-209ENST00000542200 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.6
AP3B2-209ENST00000542200 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.33□□□□□ -0.6
AP3B2-209ENST00000542200 FOXN1O15353 648 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 GRIN1Q05586 938 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 PTPN14Q15678 1187 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 CFAP100Q494V2 611 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 IFIT1BQ5T764 474 aaKnown RBP11.32□□□□□ -0.6
AP3B2-209ENST00000542200 CCDC112Q8NEF3 446 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 VPS54Q9P1Q0 977 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 MINPP1Q9UNW1 487 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 PCDHB6Q9Y5E3 794 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 COL14A1Q05707 1796 aaKnown RBP11.32□□□□□ -0.6
AP3B2-209ENST00000542200 MYH15Q9Y2K3 1946 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 SFPQP23246 707 aaKnown RBP eCLIP11.32□□□□□ -0.6
AP3B2-209ENST00000542200 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 MTERF4Q7Z6M4 381 aaKnown RBP11.32□□□□□ -0.6
AP3B2-209ENST00000542200 LINC00116Q8NCU8 138 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 PCDHA5Q9Y5H7 936 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 POLR2DO15514 142 aaKnown RBP11.32□□□□□ -0.6
AP3B2-209ENST00000542200 KLRK1P26718 216 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 RESP18Q5W5W9 173 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 IQCA1Q86XH1 822 aa11.32□□□□□ -0.6
AP3B2-209ENST00000542200 AATFQ9NY61 560 aaKnown RBP eCLIP11.32□□□□□ -0.6
AP3B2-209ENST00000542200 USP17L12C9JPN9 530 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 USP17L21D6R901 530 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 GSDMDP57764 484 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 FANCCQ00597 558 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 UBE4AQ14139 1066 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 FAM182BQ5T319 152 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 TBC1D9BQ66K14 1250 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 KRBA2Q6ZNG9 492 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 NBPF11Q86T75 865 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 NBPF5PQ86XG9 351 aaPredicted RBP11.31□□□□□ -0.6
AP3B2-209ENST00000542200 SRP68Q9UHB9 627 aaKnown RBP11.31□□□□□ -0.6
AP3B2-209ENST00000542200 V9GY48 417 aaPredicted RBP11.31□□□□□ -0.6
AP3B2-209ENST00000542200 STK36Q9NRP7 1315 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 NRDCO43847 1150 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 XBP1P17861 261 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 TOB1P50616 345 aaPredicted RBP11.31□□□□□ -0.6
AP3B2-209ENST00000542200 UBASH3AP57075 661 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 RILPL1Q5EBL4 403 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 CATIPQ7Z7H3 387 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 METTL16Q86W50 562 aaKnown RBP11.31□□□□□ -0.6
AP3B2-209ENST00000542200 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 FAM84BQ96KN1 310 aaPredicted RBP11.31□□□□□ -0.6
AP3B2-209ENST00000542200 TIGD1Q96MW7 591 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 BSDC1Q9NW68 430 aaPredicted RBP11.31□□□□□ -0.6
AP3B2-209ENST00000542200 HPSEQ9Y251 543 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 DOT1LQ8TEK3 1739 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 GTF2F1P35269 517 aaKnown RBP eCLIP11.31□□□□□ -0.6
AP3B2-209ENST00000542200 GRAMD1CQ8IYS0 662 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 ANKRD36CQ5JPF3 1778 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 SPATA31A5Q5VU36 1347 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 SPATA31A7Q8IWB4 1347 aa11.31□□□□□ -0.6
AP3B2-209ENST00000542200 CCZ1BP86790 482 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 CCZ1P86791 482 aaPredicted RBP11.3□□□□□ -0.6
AP3B2-209ENST00000542200 MYL5Q02045 173 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 ZNF827Q17R98 1081 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 PTF1AQ7RTS3 328 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 ENAHQ8N8S7 591 aaPredicted RBP11.3□□□□□ -0.6
AP3B2-209ENST00000542200 UBE2Q2Q8WVN8 375 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 C8orf37Q96NL8 207 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 ZSCAN10Q96SZ4 725 aaPredicted RBP11.3□□□□□ -0.6
AP3B2-209ENST00000542200 SETDB2Q96T68 719 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.3□□□□□ -0.6
AP3B2-209ENST00000542200 HOOK1Q9UJC3 728 aaKnown RBP11.3□□□□□ -0.6
AP3B2-209ENST00000542200 FAM205CA6NFA0 338 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 NCAPHQ15003 741 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 FAM47AQ5JRC9 791 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 CLEC4GQ6UXB4 293 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 MTMR7Q9Y216 660 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 BAZ2BQ9UIF8 2168 aaKnown RBP11.3□□□□□ -0.6
AP3B2-209ENST00000542200 ZPR1O75312 459 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 CDK11BP21127 795 aaKnown RBP11.3□□□□□ -0.6
AP3B2-209ENST00000542200 RPS8P62241 208 aaKnown RBP11.3□□□□□ -0.6
AP3B2-209ENST00000542200 EVX2Q03828 476 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 FOXP4Q8IVH2 680 aaPredicted RBP11.3□□□□□ -0.6
AP3B2-209ENST00000542200 NGLY1Q96IV0 654 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 BPIFA3Q9BQP9 254 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 FOXP1Q9H334 677 aaPredicted RBP11.3□□□□□ -0.6
AP3B2-209ENST00000542200 SERTAD1Q9UHV2 236 aa11.3□□□□□ -0.6
AP3B2-209ENST00000542200 RIOK1Q9BRS2 568 aaKnown RBP11.29□□□□□ -0.6
AP3B2-209ENST00000542200 FANCLQ9NW38 375 aa11.29□□□□□ -0.6
AP3B2-209ENST00000542200 GNPATO15228 680 aa11.29□□□□□ -0.6
AP3B2-209ENST00000542200 NMT2O60551 498 aa11.29□□□□□ -0.6
AP3B2-209ENST00000542200 USP49Q70CQ1 688 aa11.29□□□□□ -0.6
AP3B2-209ENST00000542200 TUBE1Q9UJT0 475 aa11.29□□□□□ -0.6
AP3B2-209ENST00000542200 ROBO1Q9Y6N7 1651 aa11.29□□□□□ -0.6
AP3B2-209ENST00000542200 RTL9Q8NET4 1388 aa11.29□□□□□ -0.6
AP3B2-209ENST00000542200 MYH14Q7Z406 1995 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms