RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 PROCA1Q8NCQ7 364 aaPredicted RBP13.9□□□□□ -0.18
VTN-203ENST00000542029 SH3RF3Q8TEJ3 882 aaPredicted RBP13.9□□□□□ -0.18
VTN-203ENST00000542029 SMCR8Q8TEV9 937 aaPredicted RBP13.9□□□□□ -0.18
VTN-203ENST00000542029 TRIM34Q9BYJ4 488 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 ARHGAP39Q9C0H5 1083 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 AS3MTQ9HBK9 375 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 PNMA3Q9UL41 463 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 AGTPBP1Q9UPW5 1226 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 LAMB1P07942 1786 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 POTEFA5A3E0 1075 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 USP17L5A8MUK1 530 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 IDH1O75874 414 aaKnown RBP13.89□□□□□ -0.19
VTN-203ENST00000542029 HLA-DOAP06340 250 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 ASNSP08243 561 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 CYP2C8P10632 490 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 CYP7A1P22680 504 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 SLC4A8Q2Y0W8 1093 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 CLASRPQ8N2M8 674 aaKnown RBP13.89□□□□□ -0.19
VTN-203ENST00000542029 ZNF280CQ8ND82 737 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 RAET1EQ8TD07 263 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 TGFBRAP1Q8WUH2 860 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 KIF1BPQ96EK5 621 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 TLR7Q9NYK1 1049 aaKnown RBP13.89□□□□□ -0.19
VTN-203ENST00000542029 EXOC6BQ9Y2D4 811 aa13.89□□□□□ -0.19
VTN-203ENST00000542029 KIAA0100Q14667 2235 aaKnown RBP13.88□□□□□ -0.19
VTN-203ENST00000542029 RAB11FIP3O75154 756 aa13.88□□□□□ -0.19
VTN-203ENST00000542029 SPP2Q13103 211 aa13.88□□□□□ -0.19
VTN-203ENST00000542029 TTF1Q15361 905 aaPredicted RBP13.88□□□□□ -0.19
VTN-203ENST00000542029 METTL16Q86W50 562 aaKnown RBP13.88□□□□□ -0.19
VTN-203ENST00000542029 CRACR2BQ8N4Y2 399 aaPredicted RBP13.88□□□□□ -0.19
VTN-203ENST00000542029 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
VTN-203ENST00000542029 TRIM47Q96LD4 638 aa13.88□□□□□ -0.19
VTN-203ENST00000542029 PIH1D3Q9NQM4 214 aaKnown RBP13.88□□□□□ -0.19
VTN-203ENST00000542029 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
VTN-203ENST00000542029 RCAN3Q9UKA8 241 aa13.88□□□□□ -0.19
VTN-203ENST00000542029 MYH13Q9UKX3 1938 aa13.88□□□□□ -0.19
VTN-203ENST00000542029 FLT1P17948 1338 aa13.88□□□□□ -0.19
VTN-203ENST00000542029 OSBPP22059 807 aa13.87□□□□□ -0.19
VTN-203ENST00000542029 GCLCP48506 637 aaPredicted RBP13.87□□□□□ -0.19
VTN-203ENST00000542029 MAPKAPK5Q8IW41 473 aa13.87□□□□□ -0.19
VTN-203ENST00000542029 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.87□□□□□ -0.19
VTN-203ENST00000542029 WDR18Q9BV38 432 aa13.87□□□□□ -0.19
VTN-203ENST00000542029 MYPNQ86TC9 1320 aa13.87□□□□□ -0.19
VTN-203ENST00000542029 FAM196BA6NMK8 535 aa13.86□□□□□ -0.19
VTN-203ENST00000542029 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
VTN-203ENST00000542029 SLURP2P0DP57 97 aa13.86□□□□□ -0.19
VTN-203ENST00000542029 GRK4P32298 578 aa13.86□□□□□ -0.19
VTN-203ENST00000542029 FAM110CQ1W6H9 321 aa13.86□□□□□ -0.19
VTN-203ENST00000542029 SH3D19Q5HYK7 790 aa13.86□□□□□ -0.19
VTN-203ENST00000542029 ADGRA1Q86SQ6 560 aa13.86□□□□□ -0.19
VTN-203ENST00000542029 MAGEB6Q8N7X4 407 aa13.86□□□□□ -0.19
VTN-203ENST00000542029 NKX2-3Q8TAU0 364 aa13.86□□□□□ -0.19
VTN-203ENST00000542029 COG6Q9Y2V7 657 aa13.86□□□□□ -0.19
VTN-203ENST00000542029 MYH2Q9UKX2 1941 aa13.86□□□□□ -0.19
VTN-203ENST00000542029 C19orf81C9J6K1 198 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 EN2P19622 333 aaPredicted RBP13.85□□□□□ -0.19
VTN-203ENST00000542029 CTGFP29279 349 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 USP5P45974 858 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 UBXN2AP68543 259 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 PDE3AQ14432 1141 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 TTC6Q86TZ1 520 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 CCDC84Q86UT8 332 aaPredicted RBP13.85□□□□□ -0.19
VTN-203ENST00000542029 SLAIN1Q8ND83 568 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 SH3TC2Q8TF17 1288 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 IL1RAPL2Q9NP60 686 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 TMOD4Q9NZQ9 345 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 PALD1Q9ULE6 856 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 HTTP42858 3142 aa13.85□□□□□ -0.19
VTN-203ENST00000542029 TNPO2O14787 897 aaKnown RBP13.84□□□□□ -0.19
VTN-203ENST00000542029 CAPN2P17655 700 aa13.84□□□□□ -0.19
VTN-203ENST00000542029 HMGCS2P54868 508 aa13.84□□□□□ -0.19
VTN-203ENST00000542029 BACE1P56817 501 aa13.84□□□□□ -0.19
VTN-203ENST00000542029 DYNLL1P63167 89 aaKnown RBP13.84□□□□□ -0.19
VTN-203ENST00000542029 PRKCZQ05513 592 aa13.84□□□□□ -0.19
VTN-203ENST00000542029 MIGA1Q8NAN2 632 aa13.84□□□□□ -0.19
VTN-203ENST00000542029 COA7Q96BR5 231 aa13.84□□□□□ -0.19
VTN-203ENST00000542029 GCC1Q96CN9 775 aa13.84□□□□□ -0.19
VTN-203ENST00000542029 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.84□□□□□ -0.19
VTN-203ENST00000542029 BIN2Q9UBW5 565 aaPredicted RBP13.84□□□□□ -0.19
VTN-203ENST00000542029 USP17L10C9JJH3 530 aa13.83□□□□□ -0.2
VTN-203ENST00000542029 ECM2O94769 699 aaPredicted RBP13.83□□□□□ -0.2
VTN-203ENST00000542029 IRF5Q13568 498 aa13.83□□□□□ -0.2
VTN-203ENST00000542029 RRP1BQ14684 758 aaKnown RBP13.83□□□□□ -0.2
VTN-203ENST00000542029 TREML2Q5T2D2 321 aa13.83□□□□□ -0.2
VTN-203ENST00000542029 PXYLP1Q8TE99 480 aa13.83□□□□□ -0.2
VTN-203ENST00000542029 EHD4Q9H223 541 aa13.83□□□□□ -0.2
VTN-203ENST00000542029 ANTXR1Q9H6X2 564 aa13.83□□□□□ -0.2
VTN-203ENST00000542029 SERPINB13Q9UIV8 391 aa13.83□□□□□ -0.2
VTN-203ENST00000542029 AK9Q5TCS8 1911 aa13.83□□□□□ -0.2
VTN-203ENST00000542029 SLC34A2O95436 690 aa13.82□□□□□ -0.2
VTN-203ENST00000542029 HOXA7P31268 230 aaPredicted RBP13.82□□□□□ -0.2
VTN-203ENST00000542029 FLT3LGP49771 235 aa13.82□□□□□ -0.2
VTN-203ENST00000542029 IRX3P78415 501 aaPredicted RBP13.82□□□□□ -0.2
VTN-203ENST00000542029 SLC9C2Q5TAH2 1124 aa13.82□□□□□ -0.2
VTN-203ENST00000542029 SIRT2Q8IXJ6 389 aa13.82□□□□□ -0.2
VTN-203ENST00000542029 ANKRD13CQ8N6S4 541 aa13.82□□□□□ -0.2
VTN-203ENST00000542029 GTF3C2Q8WUA4 911 aaPredicted RBP13.82□□□□□ -0.2
VTN-203ENST00000542029 CRNKL1Q9BZJ0 848 aaKnown RBP13.82□□□□□ -0.2
VTN-203ENST00000542029 ASCC2Q9H1I8 757 aaPredicted RBP13.82□□□□□ -0.2
VTN-203ENST00000542029 DNAJC18Q9H819 358 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms