RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 AS3MTQ9HBK9 375 aa18.33■□□□□ 0.52
ITM2C-208ENST00000541852 USP17L5A8MUK1 530 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 CCL5P13501 91 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 CAP2P40123 477 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 PPP4CP60510 307 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 PRKCZQ05513 592 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 IRF5Q13568 498 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 MTFR1Q15390 333 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 TNNI3KQ59H18 835 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 NAA16Q6N069 864 aaPredicted RBP18.32■□□□□ 0.52
ITM2C-208ENST00000541852 FOXP4Q8IVH2 680 aaPredicted RBP18.32■□□□□ 0.52
ITM2C-208ENST00000541852 TMEM57Q8N5G2 664 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 COA7Q96BR5 231 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 RNF208Q9H0X6 261 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.32■□□□□ 0.52
ITM2C-208ENST00000541852 FPGT-TNNI3KV9GXZ4 949 aa18.32■□□□□ 0.52
ITM2C-208ENST00000541852 TNPO2O14787 897 aaKnown RBP18.31■□□□□ 0.52
ITM2C-208ENST00000541852 ADCY3O60266 1144 aa18.31■□□□□ 0.52
ITM2C-208ENST00000541852 ECM2O94769 699 aaPredicted RBP18.31■□□□□ 0.52
ITM2C-208ENST00000541852 SPP2Q13103 211 aa18.31■□□□□ 0.52
ITM2C-208ENST00000541852 TMED8Q6PL24 325 aaPredicted RBP18.31■□□□□ 0.52
ITM2C-208ENST00000541852 CERS3Q8IU89 383 aa18.31■□□□□ 0.52
ITM2C-208ENST00000541852 FTSJ3Q8IY81 847 aaKnown RBP18.31■□□□□ 0.52
ITM2C-208ENST00000541852 HTATIP2Q9BUP3 242 aa18.31■□□□□ 0.52
ITM2C-208ENST00000541852 SURF6O75683 361 aaKnown RBP18.3■□□□□ 0.52
ITM2C-208ENST00000541852 FLT3LGP49771 235 aa18.3■□□□□ 0.52
ITM2C-208ENST00000541852 PI16Q6UXB8 463 aa18.3■□□□□ 0.52
ITM2C-208ENST00000541852 NOP58Q9Y2X3 529 aaKnown RBP18.3■□□□□ 0.52
ITM2C-208ENST00000541852 DOCK1Q14185 1865 aa18.29■□□□□ 0.52
ITM2C-208ENST00000541852 ASNSP08243 561 aa18.29■□□□□ 0.52
ITM2C-208ENST00000541852 FAM110CQ1W6H9 321 aa18.29■□□□□ 0.52
ITM2C-208ENST00000541852 SH3D19Q5HYK7 790 aa18.29■□□□□ 0.52
ITM2C-208ENST00000541852 DPF3Q92784 378 aa18.29■□□□□ 0.52
ITM2C-208ENST00000541852 WDR18Q9BV38 432 aa18.29■□□□□ 0.52
ITM2C-208ENST00000541852 MGAMO43451 1857 aa18.29■□□□□ 0.52
ITM2C-208ENST00000541852 C19orf81C9J6K1 198 aa18.28■□□□□ 0.52
ITM2C-208ENST00000541852 SGPL1O95470 568 aa18.28■□□□□ 0.52
ITM2C-208ENST00000541852 METTL16Q86W50 562 aaKnown RBP18.28■□□□□ 0.52
ITM2C-208ENST00000541852 SH3RF3Q8TEJ3 882 aaPredicted RBP18.28■□□□□ 0.52
ITM2C-208ENST00000541852 TRIM34Q9BYJ4 488 aa18.28■□□□□ 0.52
ITM2C-208ENST00000541852 AATFQ9NY61 560 aaKnown RBP eCLIP18.28■□□□□ 0.52
ITM2C-208ENST00000541852 GABRQQ9UN88 632 aa18.28■□□□□ 0.52
ITM2C-208ENST00000541852 ZSWIM8A7E2V4 1837 aa18.28■□□□□ 0.52
ITM2C-208ENST00000541852 ZBTB7BO15156 539 aaPredicted RBP18.27■□□□□ 0.52
ITM2C-208ENST00000541852 ANKRD13CQ8N6S4 541 aa18.27■□□□□ 0.52
ITM2C-208ENST00000541852 U2AF1L4Q8WU68 220 aaKnown RBP18.27■□□□□ 0.52
ITM2C-208ENST00000541852 TGFBRAP1Q8WUH2 860 aa18.27■□□□□ 0.52
ITM2C-208ENST00000541852 DBNDD2Q9BQY9 259 aa18.27■□□□□ 0.52
ITM2C-208ENST00000541852 SNRKQ9NRH2 765 aa18.27■□□□□ 0.52
ITM2C-208ENST00000541852 TNNQ9UQP3 1299 aa18.27■□□□□ 0.52
ITM2C-208ENST00000541852 NR2E3Q9Y5X4 410 aa18.27■□□□□ 0.52
ITM2C-208ENST00000541852 PHIPQ8WWQ0 1821 aa18.27■□□□□ 0.52
ITM2C-208ENST00000541852 PTPRFP10586 1907 aa18.27■□□□□ 0.51
ITM2C-208ENST00000541852 CYP2E1P05181 493 aaPredicted RBP18.26■□□□□ 0.51
ITM2C-208ENST00000541852 SLURP2P0DP57 97 aa18.26■□□□□ 0.51
ITM2C-208ENST00000541852 BACE1P56817 501 aa18.26■□□□□ 0.51
ITM2C-208ENST00000541852 TREML2Q5T2D2 321 aa18.26■□□□□ 0.51
ITM2C-208ENST00000541852 CRACR2BQ8N4Y2 399 aaPredicted RBP18.26■□□□□ 0.51
ITM2C-208ENST00000541852 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
ITM2C-208ENST00000541852 TMOD4Q9NZQ9 345 aa18.26■□□□□ 0.51
ITM2C-208ENST00000541852 CEP290O15078 2479 aa18.26■□□□□ 0.51
ITM2C-208ENST00000541852 FAM196BA6NMK8 535 aa18.25■□□□□ 0.51
ITM2C-208ENST00000541852 H0YGN5 161 aa18.25■□□□□ 0.51
ITM2C-208ENST00000541852 HLA-DOAP06340 250 aa18.25■□□□□ 0.51
ITM2C-208ENST00000541852 HOXA7P31268 230 aaPredicted RBP18.25■□□□□ 0.51
ITM2C-208ENST00000541852 HMGCS2P54868 508 aa18.25■□□□□ 0.51
ITM2C-208ENST00000541852 UBE2Q1Q7Z7E8 422 aa18.25■□□□□ 0.51
ITM2C-208ENST00000541852 ERC1Q8IUD2 1116 aa18.25■□□□□ 0.51
ITM2C-208ENST00000541852 ITPRIPQ8IWB1 547 aa18.25■□□□□ 0.51
ITM2C-208ENST00000541852 COLQQ9Y215 455 aaPredicted RBP18.25■□□□□ 0.51
ITM2C-208ENST00000541852 TFRCP02786 760 aaKnown RBP18.24■□□□□ 0.51
ITM2C-208ENST00000541852 MS4A1P11836 297 aa18.24■□□□□ 0.51
ITM2C-208ENST00000541852 HNRNPUQ00839 825 aaKnown RBP eCLIP18.24■□□□□ 0.51
ITM2C-208ENST00000541852 HSP90AB4PQ58FF6 505 aa18.24■□□□□ 0.51
ITM2C-208ENST00000541852 UNC93B1Q9H1C4 597 aa18.24■□□□□ 0.51
ITM2C-208ENST00000541852 ASCC2Q9H1I8 757 aaPredicted RBP18.24■□□□□ 0.51
ITM2C-208ENST00000541852 INHAP05111 366 aa18.23■□□□□ 0.51
ITM2C-208ENST00000541852 ZAP70P43403 619 aa18.23■□□□□ 0.51
ITM2C-208ENST00000541852 IRX3P78415 501 aaPredicted RBP18.23■□□□□ 0.51
ITM2C-208ENST00000541852 CCDC84Q86UT8 332 aaPredicted RBP18.23■□□□□ 0.51
ITM2C-208ENST00000541852 MAPKAPK5Q8IW41 473 aa18.23■□□□□ 0.51
ITM2C-208ENST00000541852 GTF3C2Q8WUA4 911 aaPredicted RBP18.23■□□□□ 0.51
ITM2C-208ENST00000541852 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.23■□□□□ 0.51
ITM2C-208ENST00000541852 MORF4L1Q9UBU8 362 aa18.23■□□□□ 0.51
ITM2C-208ENST00000541852 FLT1P17948 1338 aa18.23■□□□□ 0.51
ITM2C-208ENST00000541852 USP17L10C9JJH3 530 aa18.22■□□□□ 0.51
ITM2C-208ENST00000541852 FARP2O94887 1054 aaPredicted RBP18.22■□□□□ 0.51
ITM2C-208ENST00000541852 ELNP15502 786 aa18.22■□□□□ 0.51
ITM2C-208ENST00000541852 CYP7A1P22680 504 aa18.22■□□□□ 0.51
ITM2C-208ENST00000541852 MAP3K12Q12852 859 aa18.22■□□□□ 0.51
ITM2C-208ENST00000541852 PAK6Q9NQU5 681 aaPredicted RBP18.22■□□□□ 0.51
ITM2C-208ENST00000541852 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
ITM2C-208ENST00000541852 DOCK3Q8IZD9 2030 aa18.22■□□□□ 0.51
ITM2C-208ENST00000541852 FXR1P51114 621 aaKnown RBP eCLIP18.21■□□□□ 0.51
ITM2C-208ENST00000541852 RRP1BQ14684 758 aaKnown RBP18.21■□□□□ 0.51
ITM2C-208ENST00000541852 EAF2Q96CJ1 260 aaPredicted RBP18.21■□□□□ 0.51
ITM2C-208ENST00000541852 CCDC8Q9H0W5 538 aaPredicted RBP18.21■□□□□ 0.51
ITM2C-208ENST00000541852 DBNLQ9UJU6 430 aaKnown RBP18.21■□□□□ 0.51
ITM2C-208ENST00000541852 GJD2Q9UKL4 321 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms