RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 ARHGEF2Q92974 986 aaKnown RBP12.32□□□□□ -0.44
ERBB2-204ENST00000541774 KCNG1Q9UIX4 513 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 KRT9P35527 623 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 RNASE9P60153 205 aaKnown RBP12.32□□□□□ -0.44
ERBB2-204ENST00000541774 TNNC1P63316 161 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 ATL3Q6DD88 541 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 TBC1D1Q86TI0 1168 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-204ENST00000541774 RHPN1Q8TCX5 695 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 STMN4Q9H169 189 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-204ENST00000541774 TTC36A6NLP5 189 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 SESN3P58005 492 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 UBXN1Q04323 297 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 RRAGBQ5VZM2 374 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 LRRC45Q96CN5 670 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 ETAA1Q9NY74 926 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 ROBO2Q9HCK4 1378 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 A0A1W2PRG0 241 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 PPFIA2O75334 1257 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 VAMP4O75379 141 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 MAP7D1Q3KQU3 841 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 SARM1Q6SZW1 724 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 MIEF2Q96C03 454 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 PRR36Q9H6K5 1346 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 PTPDC1A2A3K4 754 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 PSMC4P43686 418 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 CCDC174Q6PII3 467 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 LRRC31Q6UY01 552 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 FANCLQ9NW38 375 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 ERVK-7P63135 1459 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 GGCXP38435 758 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 COG7P83436 770 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 NNTQ13423 1086 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 CUL3Q13618 768 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 KIAA0753Q2KHM9 967 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 JAKMIP2Q96AA8 810 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 SEPT11Q9NVA2 429 aaKnown RBP12.31□□□□□ -0.44
ERBB2-204ENST00000541774 SCOCQ9UIL1 159 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 PIK3C2GO75747 1445 aa12.31□□□□□ -0.44
ERBB2-204ENST00000541774 MMP14P50281 582 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 TAF7Q15545 349 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-204ENST00000541774 SWT1Q5T5J6 900 aaKnown RBP12.3□□□□□ -0.44
ERBB2-204ENST00000541774 AMOTL1Q8IY63 956 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 CCDC82Q8N4S0 544 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 CCDC197Q8NCU1 140 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 ABCC3O15438 1527 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 TRPM2O94759 1503 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 KDM5DQ9BY66 1539 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 KDM5CP41229 1560 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 TMED1Q13445 227 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 ME3Q16798 604 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 DDX46Q7L014 1031 aaKnown RBP12.3□□□□□ -0.44
ERBB2-204ENST00000541774 SIRT1Q96EB6 747 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 VPS16Q9H269 839 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 RGS12O14924 1447 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 ALDH3A1P30838 453 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 DYNC1I2Q13409 638 aaKnown RBP12.3□□□□□ -0.44
ERBB2-204ENST00000541774 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 CCHCR1Q8TD31 782 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 WASF1Q92558 559 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 KLHL29Q96CT2 875 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 TRIM47Q96LD4 638 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 POLR3AO14802 1390 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-204ENST00000541774 N4BP1O75113 896 aaKnown RBP12.3□□□□□ -0.44
ERBB2-204ENST00000541774 AP1G2O75843 785 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 RFC1P35251 1148 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-204ENST00000541774 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.3□□□□□ -0.442e-7■■□□□ 11.6
ERBB2-204ENST00000541774 NAP1L3Q99457 506 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-204ENST00000541774 SELENOOQ9BVL4 669 aa12.3□□□□□ -0.44
ERBB2-204ENST00000541774 DDX21Q9NR30 783 aaKnown RBP eCLIP12.3□□□□□ -0.44
ERBB2-204ENST00000541774 BIN2Q9UBW5 565 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-204ENST00000541774 ENC1O14682 589 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 CCDC43Q96MW1 224 aaKnown RBP12.29□□□□□ -0.44
ERBB2-204ENST00000541774 FAM210AQ96ND0 272 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 NSD2O96028 1365 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 hCG_2014768A0A024R1R8 64 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 CCDC92Q53HC0 331 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-204ENST00000541774 E4F1Q66K89 784 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-204ENST00000541774 FOXR1Q6PIV2 292 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 NYAP1Q6ZVC0 841 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 MORC4Q8TE76 937 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 CLTCL1P53675 1640 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 JAK2O60674 1132 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 DPCR1Q3MIW9 517 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 TRMT44Q8IYL2 757 aaKnown RBP12.29□□□□□ -0.44
ERBB2-204ENST00000541774 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-204ENST00000541774 RAB3IL1Q8TBN0 382 aa12.29□□□□□ -0.44
ERBB2-204ENST00000541774 SGSM2O43147 1006 aa12.28□□□□□ -0.44
ERBB2-204ENST00000541774 CUTAO60888 179 aa12.28□□□□□ -0.44
ERBB2-204ENST00000541774 PDHA1P08559 390 aa12.28□□□□□ -0.44
ERBB2-204ENST00000541774 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-204ENST00000541774 PSEN1P49768 467 aa12.28□□□□□ -0.44
ERBB2-204ENST00000541774 LAMB3Q13751 1172 aa12.28□□□□□ -0.44
ERBB2-204ENST00000541774 FAM133BQ5BKY9 247 aaKnown RBP12.28□□□□□ -0.44
ERBB2-204ENST00000541774 KAT14Q9H8E8 782 aa12.28□□□□□ -0.44
ERBB2-204ENST00000541774 ABCF2Q9UG63 623 aa12.28□□□□□ -0.44
ERBB2-204ENST00000541774 WWC3Q9ULE0 1092 aa12.28□□□□□ -0.44
ERBB2-204ENST00000541774 CTNNA1P35221 906 aaKnown RBP12.28□□□□□ -0.44
ERBB2-204ENST00000541774 FUT8Q9BYC5 575 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms