RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 SH3TC2Q8TF17 1288 aa17.19■□□□□ 0.34
SUDS3-203ENST00000541591 NOL10Q9BSC4 688 aaKnown RBP17.19■□□□□ 0.34
SUDS3-203ENST00000541591 ANTXR1Q9H6X2 564 aa17.19■□□□□ 0.34
SUDS3-203ENST00000541591 SAP30BPQ9UHR5 308 aaKnown RBP17.19■□□□□ 0.34
SUDS3-203ENST00000541591 LACTBP83111 547 aaPredicted RBP17.18■□□□□ 0.34
SUDS3-203ENST00000541591 MIGA1Q8NAN2 632 aa17.18■□□□□ 0.34
SUDS3-203ENST00000541591 TGFBRAP1Q8WUH2 860 aa17.18■□□□□ 0.34
SUDS3-203ENST00000541591 AFG3L2Q9Y4W6 797 aa17.18■□□□□ 0.34
SUDS3-203ENST00000541591 COL2A1P02458 1487 aaPredicted RBP17.18■□□□□ 0.34
SUDS3-203ENST00000541591 A0A0G2JLL6 359 aaPredicted RBP17.17■□□□□ 0.34
SUDS3-203ENST00000541591 IDH1O75874 414 aaKnown RBP17.17■□□□□ 0.34
SUDS3-203ENST00000541591 C20orf194Q5TEA3 1177 aa17.17■□□□□ 0.34
SUDS3-203ENST00000541591 C17orf99Q6UX52 265 aa17.17■□□□□ 0.34
SUDS3-203ENST00000541591 PRRT2Q7Z6L0 340 aaPredicted RBP17.17■□□□□ 0.34
SUDS3-203ENST00000541591 MKI67P46013 3256 aaKnown RBP17.16■□□□□ 0.34
SUDS3-203ENST00000541591 EN2P19622 333 aaPredicted RBP17.16■□□□□ 0.34
SUDS3-203ENST00000541591 CYP7A1P22680 504 aa17.16■□□□□ 0.34
SUDS3-203ENST00000541591 KIF22Q14807 665 aa17.16■□□□□ 0.34
SUDS3-203ENST00000541591 SLC9C1Q4G0N8 1177 aa17.16■□□□□ 0.34
SUDS3-203ENST00000541591 TREML2Q5T2D2 321 aa17.16■□□□□ 0.34
SUDS3-203ENST00000541591 TRIM47Q96LD4 638 aa17.16■□□□□ 0.34
SUDS3-203ENST00000541591 ZCCHC17Q9NP64 241 aaKnown RBP17.16■□□□□ 0.34
SUDS3-203ENST00000541591 FLT1P17948 1338 aa17.16■□□□□ 0.34
SUDS3-203ENST00000541591 CTNND1O60716 968 aaKnown RBP17.15■□□□□ 0.34
SUDS3-203ENST00000541591 GDF11O95390 407 aa17.15■□□□□ 0.34
SUDS3-203ENST00000541591 PSMC4P43686 418 aa17.15■□□□□ 0.34
SUDS3-203ENST00000541591 JAG1P78504 1218 aa17.15■□□□□ 0.34
SUDS3-203ENST00000541591 MAP3K10Q02779 954 aa17.15■□□□□ 0.34
SUDS3-203ENST00000541591 SIRT2Q8IXJ6 389 aa17.15■□□□□ 0.34
SUDS3-203ENST00000541591 MAGEB6Q8N7X4 407 aa17.15■□□□□ 0.34
SUDS3-203ENST00000541591 ARMC5Q96C12 935 aa17.15■□□□□ 0.34
SUDS3-203ENST00000541591 RCAN3Q9UKA8 241 aa17.15■□□□□ 0.34
SUDS3-203ENST00000541591 PALD1Q9ULE6 856 aa17.15■□□□□ 0.34
SUDS3-203ENST00000541591 CXCL11O14625 94 aa17.14■□□□□ 0.33
SUDS3-203ENST00000541591 FMNL1O95466 1100 aaPredicted RBP17.14■□□□□ 0.33
SUDS3-203ENST00000541591 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
SUDS3-203ENST00000541591 ZNF333Q96JL9 665 aa17.14■□□□□ 0.33
SUDS3-203ENST00000541591 PARK7Q99497 189 aaKnown RBP17.14■□□□□ 0.33
SUDS3-203ENST00000541591 DNAJC18Q9H819 358 aa17.14■□□□□ 0.33
SUDS3-203ENST00000541591 BAG3O95817 575 aa17.13■□□□□ 0.33
SUDS3-203ENST00000541591 OSBPP22059 807 aa17.13■□□□□ 0.33
SUDS3-203ENST00000541591 SPP2Q13103 211 aa17.13■□□□□ 0.33
SUDS3-203ENST00000541591 EDC3Q96F86 508 aaKnown RBP17.13■□□□□ 0.33
SUDS3-203ENST00000541591 ALPK3Q96L96 1907 aa17.13■□□□□ 0.33
SUDS3-203ENST00000541591 BCRP11274 1271 aa17.12■□□□□ 0.33
SUDS3-203ENST00000541591 HMGCS2P54868 508 aa17.12■□□□□ 0.33
SUDS3-203ENST00000541591 ERC1Q8IUD2 1116 aa17.12■□□□□ 0.33
SUDS3-203ENST00000541591 ZNF512BQ96KM6 892 aaPredicted RBP17.12■□□□□ 0.33
SUDS3-203ENST00000541591 DNAJC2Q99543 621 aaKnown RBP17.12■□□□□ 0.33
SUDS3-203ENST00000541591 GABRQQ9UN88 632 aa17.12■□□□□ 0.33
SUDS3-203ENST00000541591 MYPNQ86TC9 1320 aa17.12■□□□□ 0.33
SUDS3-203ENST00000541591 TBC1D12O60347 775 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 PEX10O60683 326 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
SUDS3-203ENST00000541591 CAP2P40123 477 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 PPP4CP60510 307 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 EVX2Q03828 476 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 PRKCZQ05513 592 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 MTFR1Q15390 333 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 FASTKD5Q7L8L6 764 aaKnown RBP17.11■□□□□ 0.33
SUDS3-203ENST00000541591 CRACR2BQ8N4Y2 399 aaPredicted RBP17.11■□□□□ 0.33
SUDS3-203ENST00000541591 ZBTB40Q9NUA8 1239 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 PARP14Q460N5 1801 aa17.11■□□□□ 0.33
SUDS3-203ENST00000541591 COL11A1P12107 1806 aaPredicted RBP17.1■□□□□ 0.33
SUDS3-203ENST00000541591 USP5P45974 858 aa17.1■□□□□ 0.33
SUDS3-203ENST00000541591 ARHGEF6Q15052 776 aa17.1■□□□□ 0.33
SUDS3-203ENST00000541591 ANKRD13CQ8N6S4 541 aa17.1■□□□□ 0.33
SUDS3-203ENST00000541591 SMCR8Q8TEV9 937 aaPredicted RBP17.1■□□□□ 0.33
SUDS3-203ENST00000541591 TRIM34Q9BYJ4 488 aa17.1■□□□□ 0.33
SUDS3-203ENST00000541591 SRRDQ9UH36 339 aa17.1■□□□□ 0.33
SUDS3-203ENST00000541591 FRMPD3Q5JV73 1810 aa17.1■□□□□ 0.33
SUDS3-203ENST00000541591 GOLIM4O00461 696 aa17.09■□□□□ 0.33
SUDS3-203ENST00000541591 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
SUDS3-203ENST00000541591 MAP4K4O95819 1239 aaPredicted RBP17.09■□□□□ 0.33
SUDS3-203ENST00000541591 MS4A1P11836 297 aa17.09■□□□□ 0.33
SUDS3-203ENST00000541591 PLCG2P16885 1265 aa17.09■□□□□ 0.33
SUDS3-203ENST00000541591 MTMR2Q13614 643 aa17.09■□□□□ 0.33
SUDS3-203ENST00000541591 ZNF280CQ8ND82 737 aa17.09■□□□□ 0.33
SUDS3-203ENST00000541591 RAET1EQ8TD07 263 aa17.09■□□□□ 0.33
SUDS3-203ENST00000541591 TMEM106CQ9BVX2 250 aa17.09■□□□□ 0.33
SUDS3-203ENST00000541591 PI4KBQ9UBF8 816 aa17.09■□□□□ 0.33
SUDS3-203ENST00000541591 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
SUDS3-203ENST00000541591 AGTPBP1Q9UPW5 1226 aa17.09■□□□□ 0.33
SUDS3-203ENST00000541591 USP17L5A8MUK1 530 aa17.08■□□□□ 0.32
SUDS3-203ENST00000541591 CHGBP05060 677 aa17.08■□□□□ 0.32
SUDS3-203ENST00000541591 HERC5Q9UII4 1024 aaKnown RBP17.08■□□□□ 0.32
SUDS3-203ENST00000541591 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
SUDS3-203ENST00000541591 FCGRTP55899 365 aa17.07■□□□□ 0.32
SUDS3-203ENST00000541591 MAP3K12Q12852 859 aa17.07■□□□□ 0.32
SUDS3-203ENST00000541591 NBPF11Q86T75 865 aa17.07■□□□□ 0.32
SUDS3-203ENST00000541591 CLASRPQ8N2M8 674 aaKnown RBP17.07■□□□□ 0.32
SUDS3-203ENST00000541591 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
SUDS3-203ENST00000541591 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
SUDS3-203ENST00000541591 ZNFX1Q9P2E3 1918 aaKnown RBP17.07■□□□□ 0.32
SUDS3-203ENST00000541591 MYH4Q9Y623 1939 aa17.07■□□□□ 0.32
SUDS3-203ENST00000541591 HMMRO75330 724 aa17.06■□□□□ 0.32
SUDS3-203ENST00000541591 HLA-DOAP06340 250 aa17.06■□□□□ 0.32
SUDS3-203ENST00000541591 ELNP15502 786 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms