RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 ATG9AQ7Z3C6 839 aa9.83□□□□□ -0.84
LMO3-226ENST00000541589 NBPF11Q86T75 865 aa9.83□□□□□ -0.84
LMO3-226ENST00000541589 OGFOD1Q8N543 542 aa9.83□□□□□ -0.84
LMO3-226ENST00000541589 FBXW7Q969H0 707 aa9.83□□□□□ -0.84
LMO3-226ENST00000541589 EVI5LQ96CN4 794 aa9.83□□□□□ -0.84
LMO3-226ENST00000541589 KIF2CQ99661 725 aa9.83□□□□□ -0.84
LMO3-226ENST00000541589 CCDC8Q9H0W5 538 aaPredicted RBP9.83□□□□□ -0.84
LMO3-226ENST00000541589 PTCH2Q9Y6C5 1203 aa9.83□□□□□ -0.84
LMO3-226ENST00000541589 COL1A1P02452 1464 aaPredicted RBP9.83□□□□□ -0.84
LMO3-226ENST00000541589 CUL9Q8IWT3 2517 aa9.83□□□□□ -0.84
LMO3-226ENST00000541589 XDHP47989 1333 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 MYO3BQ8WXR4 1341 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 LAMA3Q16787 3333 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 WTIPA6NIX2 430 aaPredicted RBP9.82□□□□□ -0.84
LMO3-226ENST00000541589 PDE8AO60658 829 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 MAP4K4O95819 1239 aaPredicted RBP9.82□□□□□ -0.84
LMO3-226ENST00000541589 CTSWP56202 376 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 SLC4A8Q2Y0W8 1093 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 SLC9C1Q4G0N8 1177 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 STRIP1Q5VSL9 837 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 OTUD7BQ6GQQ9 843 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 HSCBQ8IWL3 235 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 DDX12PQ92771 950 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 EPAS1Q99814 870 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 ZBED2Q9BTP6 218 aa9.82□□□□□ -0.84
LMO3-226ENST00000541589 TLR7Q9NYK1 1049 aaKnown RBP9.82□□□□□ -0.84
LMO3-226ENST00000541589 HIP1O00291 1037 aa9.81□□□□□ -0.84
LMO3-226ENST00000541589 ATP5JP18859 108 aa9.81□□□□□ -0.84
LMO3-226ENST00000541589 MCCP23508 829 aa9.81□□□□□ -0.84
LMO3-226ENST00000541589 IFIT5Q13325 482 aaKnown RBP9.81□□□□□ -0.84
LMO3-226ENST00000541589 RABEP1Q15276 862 aa9.81□□□□□ -0.84
LMO3-226ENST00000541589 TTLL11Q8NHH1 800 aa9.81□□□□□ -0.84
LMO3-226ENST00000541589 DEFB129Q9H1M3 183 aa9.81□□□□□ -0.84
LMO3-226ENST00000541589 DBNLQ9UJU6 430 aaKnown RBP9.81□□□□□ -0.84
LMO3-226ENST00000541589 MED23Q9ULK4 1368 aa9.81□□□□□ -0.84
LMO3-226ENST00000541589 AK9Q5TCS8 1911 aa9.81□□□□□ -0.84
LMO3-226ENST00000541589 SGSM2O43147 1006 aa9.8□□□□□ -0.84
LMO3-226ENST00000541589 HSP90B1P14625 803 aaKnown RBP9.8□□□□□ -0.84
LMO3-226ENST00000541589 LRRC24Q50LG9 513 aa9.8□□□□□ -0.84
LMO3-226ENST00000541589 TAF7LQ5H9L4 462 aa9.8□□□□□ -0.84
LMO3-226ENST00000541589 UBE2Q1Q7Z7E8 422 aa9.8□□□□□ -0.84
LMO3-226ENST00000541589 RUFY2Q8WXA3 655 aa9.8□□□□□ -0.84
LMO3-226ENST00000541589 SHISA4Q96DD7 197 aa9.8□□□□□ -0.84
LMO3-226ENST00000541589 ZNF594Q96JF6 807 aaPredicted RBP9.8□□□□□ -0.84
LMO3-226ENST00000541589 ANO2Q9NQ90 1003 aa9.8□□□□□ -0.84
LMO3-226ENST00000541589 DIAPH3Q9NSV4 1193 aa9.8□□□□□ -0.84
LMO3-226ENST00000541589 PLA2G2EQ9NZK7 142 aa9.8□□□□□ -0.84
LMO3-226ENST00000541589 RFX7Q2KHR2 1363 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 ANKRD18BA2A2Z9 1011 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 PPP1R12BO60237 982 aaPredicted RBP9.79□□□□□ -0.84
LMO3-226ENST00000541589 ANAPC15P60006 121 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 ARHGEF6Q15052 776 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 CCDC152Q4G0S7 254 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 DBNDD2Q9BQY9 259 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 COA1Q9GZY4 146 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 BOLA2Q9H3K6 86 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 CEP126Q9P2H0 1117 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 AKAP2Q9Y2D5 859 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 PPP2R3BQ9Y5P8 575 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 A0A1W2PPC1 479 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 SOX1O00570 391 aaPredicted RBP9.79□□□□□ -0.84
LMO3-226ENST00000541589 USP2O75604 605 aaPredicted RBP9.79□□□□□ -0.84
LMO3-226ENST00000541589 COL9A1P20849 921 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 ITGA6P23229 1130 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 ANKRD18AQ8IVF6 992 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 MTMR14Q8NCE2 650 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 SH3TC2Q8TF17 1288 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 DPF3Q92784 378 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 IL17RAQ96F46 866 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 PUS3Q9BZE2 481 aaKnown RBP9.79□□□□□ -0.84
LMO3-226ENST00000541589 GREM2Q9H772 168 aa9.79□□□□□ -0.84
LMO3-226ENST00000541589 MYH3P11055 1940 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 ZNF804BA4D1E1 1349 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 RAD50Q92878 1312 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 A0A1B0GUL7 405 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 PPP1R3GB7ZBB8 358 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 MYCP01106 439 aaPredicted RBP9.78□□□□□ -0.84
LMO3-226ENST00000541589 TTLL5Q6EMB2 1281 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 KIAA1211Q6ZU35 1233 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 TXNRD3Q86VQ6 643 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 TICAM2Q86XR7 235 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 KIAA0825Q8IV33 1275 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 IL27Q8NEV9 243 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.78□□□□□ -0.84
LMO3-226ENST00000541589 NEUROD6Q96NK8 337 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 CCDC85AQ96PX6 553 aaPredicted RBP9.78□□□□□ -0.84
LMO3-226ENST00000541589 HAUS7Q99871 368 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 FSD1Q9BTV5 496 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 IL25Q9H293 177 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 MINPP1Q9UNW1 487 aa9.78□□□□□ -0.84
LMO3-226ENST00000541589 BHMG1C9JSJ3 638 aaPredicted RBP9.77□□□□□ -0.85
LMO3-226ENST00000541589 K7ELQ4 463 aaPredicted RBP9.77□□□□□ -0.85
LMO3-226ENST00000541589 SUPT20HL1Q3ZLR7 823 aa9.77□□□□□ -0.85
LMO3-226ENST00000541589 C6orf132Q5T0Z8 1188 aa9.77□□□□□ -0.85
LMO3-226ENST00000541589 NBPF12Q5TAG4 269 aaPredicted RBP9.77□□□□□ -0.85
LMO3-226ENST00000541589 CWC27Q6UX04 472 aaKnown RBP9.77□□□□□ -0.85
LMO3-226ENST00000541589 LDHAL6AQ6ZMR3 332 aa9.77□□□□□ -0.85
LMO3-226ENST00000541589 ANKRD13AQ8IZ07 590 aa9.77□□□□□ -0.85
LMO3-226ENST00000541589 BRI3BPQ8WY22 251 aa9.77□□□□□ -0.85
LMO3-226ENST00000541589 LSG1Q9H089 658 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms