RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 ILDR2Q71H61 639 aa7.07□□□□□ -1.28
CDKN3-206ENST00000541304 SMC5Q8IY18 1101 aa7.07□□□□□ -1.28
CDKN3-206ENST00000541304 TTLL11Q8NHH1 800 aa7.07□□□□□ -1.28
CDKN3-206ENST00000541304 CCDC85AQ96PX6 553 aaPredicted RBP7.07□□□□□ -1.28
CDKN3-206ENST00000541304 GRIP2Q9C0E4 1043 aa7.07□□□□□ -1.28
CDKN3-206ENST00000541304 RAB6BQ9NRW1 208 aa7.07□□□□□ -1.28
CDKN3-206ENST00000541304 CEP126Q9P2H0 1117 aa7.07□□□□□ -1.28
CDKN3-206ENST00000541304 DDX60Q8IY21 1712 aaKnown RBP7.07□□□□□ -1.28
CDKN3-206ENST00000541304 ABCC12Q96J65 1359 aa7.07□□□□□ -1.28
CDKN3-206ENST00000541304 MROH5Q6ZUA9 1318 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 KDM2BQ8NHM5 1336 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 MYH3P11055 1940 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 ALDH1B1P30837 517 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 HOXA10P31260 410 aaPredicted RBP7.06□□□□□ -1.28
CDKN3-206ENST00000541304 IL15P40933 162 aaPredicted RBP7.06□□□□□ -1.28
CDKN3-206ENST00000541304 DDR1Q08345 913 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 R3HDM1Q15032 1099 aaKnown RBP7.06□□□□□ -1.28
CDKN3-206ENST00000541304 WDR44Q5JSH3 913 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 FOXR1Q6PIV2 292 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 DDX46Q7L014 1031 aaKnown RBP7.06□□□□□ -1.28
CDKN3-206ENST00000541304 TAS1R3Q7RTX0 852 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 RPGRQ92834 1020 aaKnown RBP7.06□□□□□ -1.28
CDKN3-206ENST00000541304 KIF1BPQ96EK5 621 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 RBM17Q96I25 401 aaKnown RBP7.06□□□□□ -1.28
CDKN3-206ENST00000541304 KAZALD1Q96I82 304 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 CRAMP1Q96RY5 1269 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 TMX4Q9H1E5 349 aaPredicted RBP7.06□□□□□ -1.28
CDKN3-206ENST00000541304 DCTPP1Q9H773 170 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 SPON1Q9HCB6 807 aa7.06□□□□□ -1.28
CDKN3-206ENST00000541304 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-206ENST00000541304 NPR1P16066 1061 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 TGFB2P61812 414 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 POU4F2Q12837 409 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 G3BP1Q13283 466 aaKnown RBP eCLIP7.05□□□□□ -1.28
CDKN3-206ENST00000541304 OS9Q13438 667 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-206ENST00000541304 GRAPQ13588 217 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 SOGA3Q5TF21 947 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 STYK1Q6J9G0 422 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 ANKRD18AQ8IVF6 992 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 GRAPLQ8TC17 118 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-206ENST00000541304 WHAMMQ8TF30 809 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 MASTLQ96GX5 879 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 GAS2L1Q99501 681 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-206ENST00000541304 MPHOSPH8Q99549 860 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 ESYT1Q9BSJ8 1104 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 LRRCC1Q9C099 1032 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 C1orf115Q9H7X2 142 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 GPR108Q9NPR9 543 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 DOLKQ9UPQ8 538 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 AKAP2Q9Y2D5 859 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 CHMP3Q9Y3E7 222 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 CD2APQ9Y5K6 639 aa7.05□□□□□ -1.28
CDKN3-206ENST00000541304 PNMA6EA0A0J9YXQ4 647 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 FAM177BA6PVY3 158 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 H0YIN7 160 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 EYA2O00167 538 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 SURF6O75683 361 aaKnown RBP7.04□□□□□ -1.28
CDKN3-206ENST00000541304 BBOX1O75936 387 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 IL2RAP01589 272 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 HCLS1P14317 486 aaPredicted RBP7.04□□□□□ -1.28
CDKN3-206ENST00000541304 RFX5P48382 616 aaPredicted RBP7.04□□□□□ -1.28
CDKN3-206ENST00000541304 MAP3K10Q02779 954 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 PTPN12Q05209 780 aaKnown RBP7.04□□□□□ -1.28
CDKN3-206ENST00000541304 IRF5Q13568 498 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 SLFNL1Q499Z3 407 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 LDHAL6AQ6ZMR3 332 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 SIRT2Q8IXJ6 389 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 CLASRPQ8N2M8 674 aaKnown RBP7.04□□□□□ -1.28
CDKN3-206ENST00000541304 CNKSR1Q969H4 720 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 GPATCH3Q96I76 525 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 TRERF1Q96PN7 1200 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 ANKRD2Q9GZV1 360 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 GREM2Q9H772 168 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 TIMMDC1Q9NPL8 285 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 BSDC1Q9NW68 430 aaPredicted RBP7.04□□□□□ -1.28
CDKN3-206ENST00000541304 KIF13BQ9NQT8 1826 aa7.04□□□□□ -1.28
CDKN3-206ENST00000541304 AOX1Q06278 1338 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 TNRC6CQ9HCJ0 1690 aaKnown RBP7.03□□□□□ -1.28
CDKN3-206ENST00000541304 GPR25O00155 361 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 EIF5BO60841 1220 aaKnown RBP7.03□□□□□ -1.28
CDKN3-206ENST00000541304 IGSF3O75054 1194 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 ARHGEF15O94989 841 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 SRGNP10124 158 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 RPS8P62241 208 aaKnown RBP7.03□□□□□ -1.28
CDKN3-206ENST00000541304 NUCB1Q02818 461 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 EPHA10Q5JZY3 1008 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 MSL1Q68DK7 614 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 TICAM2Q86XR7 235 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 RNF135Q8IUD6 432 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 CNNM1Q9NRU3 951 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 DLEC1Q9Y238 1755 aa7.03□□□□□ -1.28
CDKN3-206ENST00000541304 LRRC37AA6NMS7 1700 aa7.02□□□□□ -1.29
CDKN3-206ENST00000541304 ZBTB7AO95365 584 aa7.02□□□□□ -1.29
CDKN3-206ENST00000541304 GSK3AP49840 483 aa7.02□□□□□ -1.29
CDKN3-206ENST00000541304 PUM3Q15397 648 aaKnown RBP7.02□□□□□ -1.29
CDKN3-206ENST00000541304 DBN1Q16643 649 aa7.02□□□□□ -1.29
CDKN3-206ENST00000541304 SMIM5Q71RC9 77 aa7.02□□□□□ -1.29
CDKN3-206ENST00000541304 CHD1LQ86WJ1 897 aa7.02□□□□□ -1.29
CDKN3-206ENST00000541304 KCTD17Q8N5Z5 321 aa7.02□□□□□ -1.29
CDKN3-206ENST00000541304 RHPN1Q8TCX5 695 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms