RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 C12orf50Q8NA57 414 aaPredicted RBP8.54□□□□□ -1.04
SUDS3-202ENST00000541280 C2CD4AQ8NCU7 369 aaPredicted RBP8.54□□□□□ -1.04
SUDS3-202ENST00000541280 DDX54Q8TDD1 881 aaKnown RBP8.54□□□□□ -1.04
SUDS3-202ENST00000541280 ZFYVE1Q9HBF4 777 aa8.54□□□□□ -1.04
SUDS3-202ENST00000541280 PCMTD2Q9NV79 361 aa8.54□□□□□ -1.04
SUDS3-202ENST00000541280 MROH2AA6NES4 1674 aa8.53□□□□□ -1.04
SUDS3-202ENST00000541280 MED26O95402 600 aa8.53□□□□□ -1.04
SUDS3-202ENST00000541280 MAOBP27338 520 aa8.53□□□□□ -1.04
SUDS3-202ENST00000541280 SOX4Q06945 474 aaPredicted RBP8.53□□□□□ -1.04
SUDS3-202ENST00000541280 GLIS3Q8NEA6 775 aa8.53□□□□□ -1.04
SUDS3-202ENST00000541280 EZH1Q92800 747 aaPredicted RBP8.53□□□□□ -1.04
SUDS3-202ENST00000541280 DCTN4Q9UJW0 460 aa8.53□□□□□ -1.04
SUDS3-202ENST00000541280 TRAK1Q9UPV9 953 aa8.53□□□□□ -1.04
SUDS3-202ENST00000541280 ABCC3O15438 1527 aa8.53□□□□□ -1.04
SUDS3-202ENST00000541280 CTSBP07858 339 aa8.52□□□□□ -1.05
SUDS3-202ENST00000541280 ADH5P11766 374 aa8.52□□□□□ -1.05
SUDS3-202ENST00000541280 SPINK2P20155 84 aa8.52□□□□□ -1.05
SUDS3-202ENST00000541280 SSTR4P31391 388 aa8.52□□□□□ -1.05
SUDS3-202ENST00000541280 IDI1Q13907 227 aa8.52□□□□□ -1.05
SUDS3-202ENST00000541280 POU4F3Q15319 338 aa8.52□□□□□ -1.05
SUDS3-202ENST00000541280 TMC7Q7Z402 723 aa8.52□□□□□ -1.05
SUDS3-202ENST00000541280 SHKBP1Q8TBC3 707 aa8.52□□□□□ -1.05
SUDS3-202ENST00000541280 TMC1Q8TDI8 760 aa8.52□□□□□ -1.05
SUDS3-202ENST00000541280 RRBP1Q9P2E9 1410 aaKnown RBP8.52□□□□□ -1.05
SUDS3-202ENST00000541280 SYNGAP1Q96PV0 1343 aa8.52□□□□□ -1.05
SUDS3-202ENST00000541280 DNMT1P26358 1616 aaKnown RBP8.51□□□□□ -1.05
SUDS3-202ENST00000541280 EIF2AK4Q9P2K8 1649 aaKnown RBP8.51□□□□□ -1.05
SUDS3-202ENST00000541280 C3P01024 1663 aa8.51□□□□□ -1.05
SUDS3-202ENST00000541280 PREX1Q8TCU6 1659 aa8.51□□□□□ -1.05
SUDS3-202ENST00000541280 TMEM238LA0A1B0GVL6 79 aa8.51□□□□□ -1.05
SUDS3-202ENST00000541280 DRD2P14416 443 aa8.51□□□□□ -1.05
SUDS3-202ENST00000541280 GRIK1P39086 918 aa8.51□□□□□ -1.05
SUDS3-202ENST00000541280 GRM2Q14416 872 aa8.51□□□□□ -1.05
SUDS3-202ENST00000541280 CPSF6Q16630 551 aaKnown RBP eCLIP8.51□□□□□ -1.05
SUDS3-202ENST00000541280 ERVK-7P63135 1459 aa8.51□□□□□ -1.05
SUDS3-202ENST00000541280 NUP155O75694 1391 aa8.5□□□□□ -1.05
SUDS3-202ENST00000541280 LMTK2Q8IWU2 1503 aa8.5□□□□□ -1.05
SUDS3-202ENST00000541280 AP3B2Q13367 1082 aa8.5□□□□□ -1.05
SUDS3-202ENST00000541280 DSC3Q14574 896 aa8.5□□□□□ -1.05
SUDS3-202ENST00000541280 CDPF1Q6NVV7 123 aa8.5□□□□□ -1.05
SUDS3-202ENST00000541280 DTX1Q86Y01 620 aa8.5□□□□□ -1.05
SUDS3-202ENST00000541280 PSMG3-AS1Q96PY0 264 aa8.5□□□□□ -1.05
SUDS3-202ENST00000541280 GSX1Q9H4S2 264 aaPredicted RBP8.5□□□□□ -1.05
SUDS3-202ENST00000541280 CAMSAP1Q5T5Y3 1602 aa8.5□□□□□ -1.05
SUDS3-202ENST00000541280 RPRD2Q5VT52 1461 aaKnown RBP8.5□□□□□ -1.05
SUDS3-202ENST00000541280 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.49□□□□□ -1.05
SUDS3-202ENST00000541280 CORO1BQ9BR76 489 aa8.49□□□□□ -1.05
SUDS3-202ENST00000541280 RNF17Q9BXT8 1623 aaKnown RBP8.49□□□□□ -1.05
SUDS3-202ENST00000541280 SPATA31D1Q6ZQQ2 1576 aa8.48□□□□□ -1.05
SUDS3-202ENST00000541280 UGGT1Q9NYU2 1555 aa8.48□□□□□ -1.05
SUDS3-202ENST00000541280 CEP170BQ9Y4F5 1589 aaPredicted RBP8.48□□□□□ -1.05
SUDS3-202ENST00000541280 FAM95CA0A1B0GW59 222 aa8.48□□□□□ -1.05
SUDS3-202ENST00000541280 GADD45BO75293 160 aaPredicted RBP8.48□□□□□ -1.05
SUDS3-202ENST00000541280 USP11P51784 963 aa8.48□□□□□ -1.05
SUDS3-202ENST00000541280 PAOXQ6QHF9 649 aa8.48□□□□□ -1.05
SUDS3-202ENST00000541280 EPS8L3Q8TE67 593 aaKnown RBP8.48□□□□□ -1.05
SUDS3-202ENST00000541280 YIPF2Q9BWQ6 316 aa8.48□□□□□ -1.05
SUDS3-202ENST00000541280 ACTL7BQ9Y614 415 aa8.48□□□□□ -1.05
SUDS3-202ENST00000541280 CLTCQ00610 1675 aaKnown RBP8.48□□□□□ -1.05
SUDS3-202ENST00000541280 PRDM15P57071 1507 aaPredicted RBP8.48□□□□□ -1.05
SUDS3-202ENST00000541280 TMEM2Q9UHN6 1383 aa8.48□□□□□ -1.05
SUDS3-202ENST00000541280 NPHP4O75161 1426 aaPredicted RBP8.47□□□□□ -1.05
SUDS3-202ENST00000541280 NOS1P29475 1434 aa8.47□□□□□ -1.05
SUDS3-202ENST00000541280 MED14O60244 1454 aa8.47□□□□□ -1.05
SUDS3-202ENST00000541280 IQSEC2Q5JU85 1478 aa8.47□□□□□ -1.05
SUDS3-202ENST00000541280 TREHO43280 583 aa8.47□□□□□ -1.05
SUDS3-202ENST00000541280 ECEL1O95672 775 aa8.47□□□□□ -1.05
SUDS3-202ENST00000541280 FAAP100Q0VG06 881 aa8.47□□□□□ -1.05
SUDS3-202ENST00000541280 GIMAP7Q8NHV1 300 aa8.47□□□□□ -1.05
SUDS3-202ENST00000541280 FBLIM1Q8WUP2 373 aa8.47□□□□□ -1.05
SUDS3-202ENST00000541280 MFSD14AQ96MC6 490 aa8.47□□□□□ -1.05
SUDS3-202ENST00000541280 ZNF335Q9H4Z2 1342 aaPredicted RBP8.47□□□□□ -1.05
SUDS3-202ENST00000541280 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.46□□□□□ -1.06
SUDS3-202ENST00000541280 WDR64B1ANS9 1081 aa8.46□□□□□ -1.06
SUDS3-202ENST00000541280 TOM1O60784 492 aa8.46□□□□□ -1.06
SUDS3-202ENST00000541280 F13BP05160 661 aa8.46□□□□□ -1.06
SUDS3-202ENST00000541280 XRCC5P13010 732 aaKnown RBP8.46□□□□□ -1.06
SUDS3-202ENST00000541280 RXRBP28702 533 aa8.46□□□□□ -1.06
SUDS3-202ENST00000541280 LTKP29376 864 aa8.46□□□□□ -1.06
SUDS3-202ENST00000541280 ENOX2Q16206 610 aaKnown RBP8.46□□□□□ -1.06
SUDS3-202ENST00000541280 ACSS3Q9H6R3 686 aa8.46□□□□□ -1.06
SUDS3-202ENST00000541280 PIM2Q9P1W9 311 aa8.46□□□□□ -1.06
SUDS3-202ENST00000541280 BIN2Q9UBW5 565 aaPredicted RBP8.46□□□□□ -1.06
SUDS3-202ENST00000541280 PRKAG2Q9UGJ0 569 aa8.46□□□□□ -1.06
SUDS3-202ENST00000541280 ZC3H13Q5T200 1668 aaKnown RBP8.46□□□□□ -1.06
SUDS3-202ENST00000541280 VWDEQ8N2E2 1590 aa8.45□□□□□ -1.06
SUDS3-202ENST00000541280 GATA6Q92908 595 aa8.45□□□□□ -1.06
SUDS3-202ENST00000541280 WDR18Q9BV38 432 aa8.45□□□□□ -1.06
SUDS3-202ENST00000541280 MROH1Q8NDA8 1641 aa8.44□□□□□ -1.06
SUDS3-202ENST00000541280 AOC2O75106 756 aa8.44□□□□□ -1.06
SUDS3-202ENST00000541280 KCNA1Q09470 495 aa8.44□□□□□ -1.06
SUDS3-202ENST00000541280 NFKBIBQ15653 356 aa8.44□□□□□ -1.06
SUDS3-202ENST00000541280 ZAR1Q86SH2 424 aa8.44□□□□□ -1.06
SUDS3-202ENST00000541280 METTL22Q9BUU2 404 aaPredicted RBP8.44□□□□□ -1.06
SUDS3-202ENST00000541280 FAM105AQ9NUU6 356 aa8.44□□□□□ -1.06
SUDS3-202ENST00000541280 NLRP2Q9NX02 1062 aa8.44□□□□□ -1.06
SUDS3-202ENST00000541280 SCAF11Q99590 1463 aaKnown RBP8.44□□□□□ -1.06
SUDS3-202ENST00000541280 FOSL1P15407 271 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 KCNA6P17658 529 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 MAPK1P28482 360 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms