RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TEX11Q8IYF3 940 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 AIFM3Q96NN9 605 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 ZBTB43O43298 467 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 IGSF3O75054 1194 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 BAG3O95817 575 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 PDCP20941 246 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 WTAPQ15007 396 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 NTRK3Q16288 839 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 KLHL34Q8N239 644 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 ENAHQ8N8S7 591 aaPredicted RBP14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 SLC16A10Q8TF71 515 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 ESR2Q92731 530 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 PHKBQ93100 1093 aa14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 TMX4Q9H1E5 349 aaPredicted RBP14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 RBM27Q9P2N5 1060 aaKnown RBP14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 TTF2Q9UNY4 1162 aaKnown RBP14.38□□□□□ -0.11
AP003559.1-201ENST00000540906 FLT1P17948 1338 aa14.37□□□□□ -0.11
AP003559.1-201ENST00000540906 MYH1P12882 1939 aa14.37□□□□□ -0.11
AP003559.1-201ENST00000540906 GOLGA8AA7E2F4 631 aa14.37□□□□□ -0.11
AP003559.1-201ENST00000540906 YDJCA8MPS7 323 aa14.37□□□□□ -0.11
AP003559.1-201ENST00000540906 ORC4O43929 436 aa14.37□□□□□ -0.11
AP003559.1-201ENST00000540906 HMGN5P82970 282 aaKnown RBP14.37□□□□□ -0.11
AP003559.1-201ENST00000540906 FAM184AQ8NB25 1140 aa14.37□□□□□ -0.11
AP003559.1-201ENST00000540906 MTFR1LQ9H019 292 aa14.37□□□□□ -0.11
AP003559.1-201ENST00000540906 PPP1R1BQ9UD71 204 aaPredicted RBP14.37□□□□□ -0.11
AP003559.1-201ENST00000540906 DDX49Q9Y6V7 483 aaKnown RBP14.37□□□□□ -0.11
AP003559.1-201ENST00000540906 CCDC69A6NI79 296 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 G3V3G9 751 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 FIBPO43427 364 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 DACT2Q5SW24 774 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 DCAF8Q5TAQ9 597 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 TTLL6Q8N841 843 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 ZSCAN10Q96SZ4 725 aaPredicted RBP14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 NOL10Q9BSC4 688 aaKnown RBP14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 DDX4Q9NQI0 724 aaKnown RBP14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 ORC3Q9UBD5 711 aaPredicted RBP14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 SLC12A7Q9Y666 1083 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 MYH15Q9Y2K3 1946 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 NID2Q14112 1375 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 ROBO3Q96MS0 1386 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 KIAA2012Q0VF49 1180 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 KLHL40Q2TBA0 621 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 PODNQ7Z5L7 613 aa14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 CMTR1Q8N1G2 835 aaKnown RBP14.36□□□□□ -0.11
AP003559.1-201ENST00000540906 NCLP19338 710 aaKnown RBP14.35□□□□□ -0.11
AP003559.1-201ENST00000540906 TPRNQ4KMQ1 711 aa14.35□□□□□ -0.11
AP003559.1-201ENST00000540906 APOBEC3HQ6NTF7 200 aaKnown RBP14.35□□□□□ -0.11
AP003559.1-201ENST00000540906 KIAA0825Q8IV33 1275 aa14.35□□□□□ -0.11
AP003559.1-201ENST00000540906 ZNF654Q8IZM8 581 aa14.35□□□□□ -0.11
AP003559.1-201ENST00000540906 TMEM87AQ8NBN3 555 aa14.35□□□□□ -0.11
AP003559.1-201ENST00000540906 UBAC1Q9BSL1 405 aa14.35□□□□□ -0.11
AP003559.1-201ENST00000540906 H3BQV1 296 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 CPLX1O14810 134 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 WDHD1O75717 1129 aaPredicted RBP14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 SLURP2P0DP57 97 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 PTMSP20962 102 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 GUCY1A2P33402 732 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 SKOR2Q2VWA4 1001 aaPredicted RBP14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 MTA3Q9BTC8 594 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 IL17RBQ9NRM6 502 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 TFIP11Q9UBB9 837 aaKnown RBP14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 SUGT1Q9Y2Z0 365 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 PPIP5K2O43314 1243 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 PICALMQ13492 652 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 RCSD1Q6JBY9 416 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 CAVIN1Q6NZI2 390 aaKnown RBP14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 TTC6Q86TZ1 520 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 NUP133Q8WUM0 1156 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 FTOQ9C0B1 505 aaKnown RBP eCLIP14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 ZNF277Q9NRM2 450 aaPredicted RBP14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 TAOK2Q9UL54 1235 aa14.34□□□□□ -0.11
AP003559.1-201ENST00000540906 BRCA1P38398 1863 aaKnown RBP14.33□□□□□ -0.11
AP003559.1-201ENST00000540906 PSME4Q14997 1843 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 USP17L3A6NCW0 530 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 USP17L4A6NCW7 530 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 POLR3DP05423 398 aaPredicted RBP14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 PCP11498 1178 aaKnown RBP14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 POLD1P28340 1107 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 CRKP46108 304 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 SART3Q15020 963 aaKnown RBP14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 RTN1Q16799 776 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 STRIP1Q5VSL9 837 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 CDC42EP5Q6NZY7 148 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 USP17L1Q7RTZ2 530 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 NBPF11Q86T75 865 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 SLF2Q8IX21 1173 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 TMEM63CQ9P1W3 806 aa14.33□□□□□ -0.12
AP003559.1-201ENST00000540906 ERICH2A1L162 156 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 KIF28PB7ZC32 967 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 DHX16O60231 1041 aaKnown RBP14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 PLCG2P16885 1265 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 RASA1P20936 1047 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 PTGER2P43116 358 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 CACNB3P54284 484 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 TFAP4Q01664 338 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 PDE4BQ07343 736 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 NFIAQ12857 509 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 CCDC93Q567U6 631 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 CC2D2BQ6DHV5 1058 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms