RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 A0A1B0GUL6 1792 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 PDS5AQ29RF7 1337 aaKnown RBP11.9□□□□□ -0.5
LMO3-224ENST00000540848 PNPLA7Q6ZV29 1317 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 DNM1Q05193 864 aaKnown RBP11.9□□□□□ -0.5
LMO3-224ENST00000540848 CHRNDQ07001 517 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 STK3Q13188 491 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 RASGRF1Q13972 1273 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 CDC37L1Q7L3B6 337 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 NSUN7Q8NE18 718 aaKnown RBP11.9□□□□□ -0.5
LMO3-224ENST00000540848 MTA3Q9BTC8 594 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 PANK2Q9BZ23 570 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 TSPY26PQ9H489 355 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 SEC31BQ9NQW1 1179 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 CFAP45Q9UL16 551 aa11.9□□□□□ -0.5
LMO3-224ENST00000540848 SALL1Q9NSC2 1324 aa11.9□□□□□ -0.51
LMO3-224ENST00000540848 SYCE3A1L190 88 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 PATL2C9JE40 543 aaKnown RBP11.89□□□□□ -0.51
LMO3-224ENST00000540848 FIBPO43427 364 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 PDIA3P30101 505 aaKnown RBP11.89□□□□□ -0.51
LMO3-224ENST00000540848 COL9A3Q14050 684 aaPredicted RBP11.89□□□□□ -0.51
LMO3-224ENST00000540848 SLFNL1Q499Z3 407 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 PI16Q6UXB8 463 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 TRIM44Q96DX7 344 aaPredicted RBP11.89□□□□□ -0.51
LMO3-224ENST00000540848 TMEM87BQ96K49 555 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 STRBPQ96SI9 672 aaKnown RBP11.89□□□□□ -0.51
LMO3-224ENST00000540848 SETDB2Q96T68 719 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 NACAP1Q9BZK3 213 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 CNNM2Q9H8M5 875 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 RTCBQ9Y3I0 505 aaKnown RBP11.89□□□□□ -0.51
LMO3-224ENST00000540848 TIAM2Q8IVF5 1701 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 TAF1LQ8IZX4 1826 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 CASZ1Q86V15 1759 aa11.89□□□□□ -0.51
LMO3-224ENST00000540848 FAM177BA6PVY3 158 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 PRC1O43663 620 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 GDF9O60383 454 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 GADD45BO75293 160 aaPredicted RBP11.88□□□□□ -0.51
LMO3-224ENST00000540848 GTF2E1P29083 439 aaPredicted RBP11.88□□□□□ -0.51
LMO3-224ENST00000540848 APOBRQ0VD83 1088 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 UVSSAQ2YD98 709 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 HS1BP3Q53T59 392 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 CAVIN4Q5BKX8 364 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 TTLL5Q6EMB2 1281 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 ANKRD2Q9GZV1 360 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 GDPD2Q9HCC8 539 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 NSFL1CQ9UNZ2 370 aaKnown RBP11.88□□□□□ -0.51
LMO3-224ENST00000540848 PTPDC1A2A3K4 754 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
LMO3-224ENST00000540848 CDKL5O76039 1030 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 FMNL1O95466 1100 aaPredicted RBP11.88□□□□□ -0.51
LMO3-224ENST00000540848 RESTQ13127 1097 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 ERFEQ4G0M1 354 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 HELBQ8NG08 1087 aaPredicted RBP11.88□□□□□ -0.51
LMO3-224ENST00000540848 CHAMP1Q96JM3 812 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
LMO3-224ENST00000540848 NLRP3Q96P20 1036 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 CCNL1Q9UK58 526 aaPredicted RBP11.88□□□□□ -0.51
LMO3-224ENST00000540848 WWC3Q9ULE0 1092 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 DENND2AQ9ULE3 1009 aa11.88□□□□□ -0.51
LMO3-224ENST00000540848 SBF2Q86WG5 1849 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 MYO5AQ9Y4I1 1855 aaKnown RBP11.87□□□□□ -0.51
LMO3-224ENST00000540848 GOLGA6L4A6NEF3 574 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 JAK2O60674 1132 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 APPP05067 770 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 PRR20EP86478 221 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 PRR20CP86479 221 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 PRR20DP86480 221 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 PRR20BP86481 221 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 PRR20AP86496 221 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 FOXD4L6Q3SYB3 417 aaPredicted RBP11.87□□□□□ -0.51
LMO3-224ENST00000540848 CPLX2Q6PUV4 134 aaKnown RBP11.87□□□□□ -0.51
LMO3-224ENST00000540848 FOXD4L3Q6VB84 417 aaPredicted RBP11.87□□□□□ -0.51
LMO3-224ENST00000540848 MAGEB6Q8N7X4 407 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 ZNF396Q96N95 335 aaPredicted RBP11.87□□□□□ -0.51
LMO3-224ENST00000540848 LRRC2Q9BYS8 371 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 KRT23Q9C075 422 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 NAPBQ9H115 298 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 ANGEL1Q9UNK9 670 aaKnown RBP11.87□□□□□ -0.51
LMO3-224ENST00000540848 CHD4Q14839 1912 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 MYH15Q9Y2K3 1946 aa11.87□□□□□ -0.51
LMO3-224ENST00000540848 RCAN1P53805 252 aa11.86□□□□□ -0.51
LMO3-224ENST00000540848 HAND2P61296 217 aa11.86□□□□□ -0.51
LMO3-224ENST00000540848 MEX3CQ5U5Q3 659 aaKnown RBP11.86□□□□□ -0.51
LMO3-224ENST00000540848 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
LMO3-224ENST00000540848 NBPF5PQ86XG9 351 aaPredicted RBP11.86□□□□□ -0.51
LMO3-224ENST00000540848 HLA-CQ95604 372 aa11.86□□□□□ -0.51
LMO3-224ENST00000540848 RBSNQ9H1K0 784 aa11.86□□□□□ -0.51
LMO3-224ENST00000540848 RNF41Q9H4P4 317 aaPredicted RBP11.86□□□□□ -0.51
LMO3-224ENST00000540848 DDX19AQ9NUU7 478 aaKnown RBP11.86□□□□□ -0.51
LMO3-224ENST00000540848 FCF1Q9Y324 198 aaKnown RBP11.86□□□□□ -0.51
LMO3-224ENST00000540848 C4BP0C0L5 1744 aa11.86□□□□□ -0.51
LMO3-224ENST00000540848 CPLX1O14810 134 aa11.85□□□□□ -0.51
LMO3-224ENST00000540848 MBD4O95243 580 aa11.85□□□□□ -0.51
LMO3-224ENST00000540848 CTDNEP1O95476 244 aa11.85□□□□□ -0.51
LMO3-224ENST00000540848 PCP11498 1178 aaKnown RBP11.85□□□□□ -0.51
LMO3-224ENST00000540848 LIFRP42702 1097 aa11.85□□□□□ -0.51
LMO3-224ENST00000540848 NT5C2P49902 561 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms