RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 TREML2Q5T2D2 321 aa17.73■□□□□ 0.43
MSRB3-209ENST00000540804 ZNF512BQ96KM6 892 aaPredicted RBP17.73■□□□□ 0.43
MSRB3-209ENST00000540804 BCL11AQ9H165 835 aa17.73■□□□□ 0.43
MSRB3-209ENST00000540804 APBB1O00213 710 aa17.72■□□□□ 0.43
MSRB3-209ENST00000540804 BCRP11274 1271 aa17.72■□□□□ 0.43
MSRB3-209ENST00000540804 AACSQ86V21 672 aa17.72■□□□□ 0.43
MSRB3-209ENST00000540804 PARK7Q99497 189 aaKnown RBP17.72■□□□□ 0.43
MSRB3-209ENST00000540804 NOL10Q9BSC4 688 aaKnown RBP17.72■□□□□ 0.43
MSRB3-209ENST00000540804 DNAJC18Q9H819 358 aa17.72■□□□□ 0.43
MSRB3-209ENST00000540804 SAP30BPQ9UHR5 308 aaKnown RBP17.72■□□□□ 0.43
MSRB3-209ENST00000540804 IDH1O75874 414 aaKnown RBP17.71■□□□□ 0.43
MSRB3-209ENST00000540804 BAG3O95817 575 aa17.71■□□□□ 0.43
MSRB3-209ENST00000540804 MAP4K4O95819 1239 aaPredicted RBP17.71■□□□□ 0.43
MSRB3-209ENST00000540804 CYP7A1P22680 504 aa17.71■□□□□ 0.43
MSRB3-209ENST00000540804 CAP2P40123 477 aa17.71■□□□□ 0.43
MSRB3-209ENST00000540804 PPP4CP60510 307 aa17.71■□□□□ 0.43
MSRB3-209ENST00000540804 SPP2Q13103 211 aa17.71■□□□□ 0.43
MSRB3-209ENST00000540804 FASTKD5Q7L8L6 764 aaKnown RBP17.71■□□□□ 0.43
MSRB3-209ENST00000540804 SIRT2Q8IXJ6 389 aa17.71■□□□□ 0.43
MSRB3-209ENST00000540804 MIGA1Q8NAN2 632 aa17.71■□□□□ 0.43
MSRB3-209ENST00000540804 SRRDQ9UH36 339 aa17.71■□□□□ 0.43
MSRB3-209ENST00000540804 PALD1Q9ULE6 856 aa17.71■□□□□ 0.43
MSRB3-209ENST00000540804 FLT1P17948 1338 aa17.71■□□□□ 0.42
MSRB3-209ENST00000540804 COL2A1P02458 1487 aaPredicted RBP17.7■□□□□ 0.42
MSRB3-209ENST00000540804 MTFR1Q15390 333 aa17.7■□□□□ 0.42
MSRB3-209ENST00000540804 PRPF38BQ5VTL8 546 aaKnown RBP17.7■□□□□ 0.42
MSRB3-209ENST00000540804 TMEM106CQ9BVX2 250 aa17.7■□□□□ 0.42
MSRB3-209ENST00000540804 GABRQQ9UN88 632 aa17.7■□□□□ 0.42
MSRB3-209ENST00000540804 MKI67P46013 3256 aaKnown RBP17.7■□□□□ 0.42
MSRB3-209ENST00000540804 DOCK1Q14185 1865 aa17.69■□□□□ 0.42
MSRB3-209ENST00000540804 PRKCZQ05513 592 aa17.69■□□□□ 0.42
MSRB3-209ENST00000540804 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
MSRB3-209ENST00000540804 RHPN1Q8TCX5 695 aa17.69■□□□□ 0.42
MSRB3-209ENST00000540804 PI4KBQ9UBF8 816 aa17.69■□□□□ 0.42
MSRB3-209ENST00000540804 AGTPBP1Q9UPW5 1226 aa17.69■□□□□ 0.42
MSRB3-209ENST00000540804 MYPNQ86TC9 1320 aa17.69■□□□□ 0.42
MSRB3-209ENST00000540804 GDF11O95390 407 aa17.68■□□□□ 0.42
MSRB3-209ENST00000540804 HMGCS2P54868 508 aa17.68■□□□□ 0.42
MSRB3-209ENST00000540804 C20orf194Q5TEA3 1177 aa17.68■□□□□ 0.42
MSRB3-209ENST00000540804 MAGEB6Q8N7X4 407 aa17.68■□□□□ 0.42
MSRB3-209ENST00000540804 ZNF280CQ8ND82 737 aa17.68■□□□□ 0.42
MSRB3-209ENST00000540804 ZBTB40Q9NUA8 1239 aa17.68■□□□□ 0.42
MSRB3-209ENST00000540804 MAST2Q6P0Q8 1798 aa17.68■□□□□ 0.42
MSRB3-209ENST00000540804 PHIPQ8WWQ0 1821 aa17.68■□□□□ 0.42
MSRB3-209ENST00000540804 GNRH1P01148 92 aa17.67■□□□□ 0.42
MSRB3-209ENST00000540804 ERC1Q8IUD2 1116 aa17.67■□□□□ 0.42
MSRB3-209ENST00000540804 ANKRD13CQ8N6S4 541 aa17.67■□□□□ 0.42
MSRB3-209ENST00000540804 RAET1EQ8TD07 263 aa17.67■□□□□ 0.42
MSRB3-209ENST00000540804 HERC5Q9UII4 1024 aaKnown RBP17.67■□□□□ 0.42
MSRB3-209ENST00000540804 SIPA1L1O43166 1804 aa17.67■□□□□ 0.42
MSRB3-209ENST00000540804 USP17L5A8MUK1 530 aa17.66■□□□□ 0.42
MSRB3-209ENST00000540804 PEX10O60683 326 aa17.66■□□□□ 0.42
MSRB3-209ENST00000540804 PLCG2P16885 1265 aa17.66■□□□□ 0.42
MSRB3-209ENST00000540804 GRK4P32298 578 aa17.66■□□□□ 0.42
MSRB3-209ENST00000540804 PRMT2P55345 433 aa17.66■□□□□ 0.42
MSRB3-209ENST00000540804 FCGRTP55899 365 aa17.66■□□□□ 0.42
MSRB3-209ENST00000540804 SMCR8Q8TEV9 937 aaPredicted RBP17.66■□□□□ 0.42
MSRB3-209ENST00000540804 DHX36Q9H2U1 1008 aaKnown RBP17.66■□□□□ 0.42
MSRB3-209ENST00000540804 RCAN3Q9UKA8 241 aa17.66■□□□□ 0.42
MSRB3-209ENST00000540804 SLC45A1Q9Y2W3 748 aa17.66■□□□□ 0.42
MSRB3-209ENST00000540804 MYO5AQ9Y4I1 1855 aaKnown RBP17.66■□□□□ 0.42
MSRB3-209ENST00000540804 SLC34A2O95436 690 aa17.65■□□□□ 0.42
MSRB3-209ENST00000540804 HOXD10P28358 340 aa17.65■□□□□ 0.42
MSRB3-209ENST00000540804 EVX2Q03828 476 aa17.65■□□□□ 0.42
MSRB3-209ENST00000540804 METTL16Q86W50 562 aaKnown RBP17.65■□□□□ 0.42
MSRB3-209ENST00000540804 CRACR2BQ8N4Y2 399 aaPredicted RBP17.65■□□□□ 0.42
MSRB3-209ENST00000540804 EDC3Q96F86 508 aaKnown RBP17.65■□□□□ 0.42
MSRB3-209ENST00000540804 MS4A1P11836 297 aa17.64■□□□□ 0.41
MSRB3-209ENST00000540804 USP5P45974 858 aa17.64■□□□□ 0.41
MSRB3-209ENST00000540804 MTMR2Q13614 643 aa17.64■□□□□ 0.41
MSRB3-209ENST00000540804 SLFNL1Q499Z3 407 aa17.64■□□□□ 0.41
MSRB3-209ENST00000540804 FOXP4Q8IVH2 680 aaPredicted RBP17.64■□□□□ 0.41
MSRB3-209ENST00000540804 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
MSRB3-209ENST00000540804 PROCA1Q8NCQ7 364 aaPredicted RBP17.64■□□□□ 0.41
MSRB3-209ENST00000540804 DDX19BQ9UMR2 479 aa17.64■□□□□ 0.41
MSRB3-209ENST00000540804 TNPO2O14787 897 aaKnown RBP17.63■□□□□ 0.41
MSRB3-209ENST00000540804 ELNP15502 786 aa17.63■□□□□ 0.41
MSRB3-209ENST00000540804 FLT3LGP49771 235 aa17.63■□□□□ 0.41
MSRB3-209ENST00000540804 HSP90AB4PQ58FF6 505 aa17.63■□□□□ 0.41
MSRB3-209ENST00000540804 SH3D19Q5HYK7 790 aa17.63■□□□□ 0.41
MSRB3-209ENST00000540804 SHISA4Q96DD7 197 aa17.63■□□□□ 0.41
MSRB3-209ENST00000540804 DNAJC2Q99543 621 aaKnown RBP17.63■□□□□ 0.41
MSRB3-209ENST00000540804 TRIM34Q9BYJ4 488 aa17.63■□□□□ 0.41
MSRB3-209ENST00000540804 BIN2Q9UBW5 565 aaPredicted RBP17.63■□□□□ 0.41
MSRB3-209ENST00000540804 RBBP6Q7Z6E9 1792 aaKnown RBP17.62■□□□□ 0.41
MSRB3-209ENST00000540804 GOLIM4O00461 696 aa17.62■□□□□ 0.41
MSRB3-209ENST00000540804 CCL5P13501 91 aa17.62■□□□□ 0.41
MSRB3-209ENST00000540804 MAP3K12Q12852 859 aa17.62■□□□□ 0.41
MSRB3-209ENST00000540804 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
MSRB3-209ENST00000540804 KIF1BPQ96EK5 621 aa17.62■□□□□ 0.41
MSRB3-209ENST00000540804 RIOK1Q9BRS2 568 aaKnown RBP17.62■□□□□ 0.41
MSRB3-209ENST00000540804 WDR18Q9BV38 432 aa17.62■□□□□ 0.41
MSRB3-209ENST00000540804 ASCC2Q9H1I8 757 aaPredicted RBP17.62■□□□□ 0.41
MSRB3-209ENST00000540804 AS3MTQ9HBK9 375 aa17.62■□□□□ 0.41
MSRB3-209ENST00000540804 TAOK2Q9UL54 1235 aa17.62■□□□□ 0.41
MSRB3-209ENST00000540804 ZBTB21Q9ULJ3 1066 aa17.62■□□□□ 0.41
MSRB3-209ENST00000540804 PTPRFP10586 1907 aa17.62■□□□□ 0.41
MSRB3-209ENST00000540804 ADCY3O60266 1144 aa17.61■□□□□ 0.41
MSRB3-209ENST00000540804 GH2P01242 217 aa17.61■□□□□ 0.41
MSRB3-209ENST00000540804 CHGBP05060 677 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms