RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ZNRF3Q9ULT6 936 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 TACC3Q9Y6A5 838 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 B4E1Z4 1266 aa16.79■□□□□ 0.28
CYB561A3-216ENST00000540755 EVCP57679 992 aa16.79■□□□□ 0.28
CYB561A3-216ENST00000540755 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
CYB561A3-216ENST00000540755 CHST3Q7LGC8 479 aa16.79■□□□□ 0.28
CYB561A3-216ENST00000540755 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
CYB561A3-216ENST00000540755 GPRC5DQ9NZD1 345 aa16.79■□□□□ 0.28
CYB561A3-216ENST00000540755 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.79■□□□□ 0.28
CYB561A3-216ENST00000540755 THSD7BQ9C0I4 1608 aa16.79■□□□□ 0.28
CYB561A3-216ENST00000540755 SLC3A2P08195 630 aaKnown RBP16.78■□□□□ 0.28
CYB561A3-216ENST00000540755 CRKP46108 304 aa16.78■□□□□ 0.28
CYB561A3-216ENST00000540755 VEGFBP49765 207 aa16.78■□□□□ 0.28
CYB561A3-216ENST00000540755 NT5C2P49902 561 aa16.78■□□□□ 0.28
CYB561A3-216ENST00000540755 CYB5R4Q7L1T6 521 aa16.78■□□□□ 0.28
CYB561A3-216ENST00000540755 AMOTL1Q8IY63 956 aa16.78■□□□□ 0.28
CYB561A3-216ENST00000540755 TGFBRAP1Q8WUH2 860 aa16.78■□□□□ 0.28
CYB561A3-216ENST00000540755 TMEM87BQ96K49 555 aa16.78■□□□□ 0.28
CYB561A3-216ENST00000540755 ZDHHC15Q96MV8 337 aa16.78■□□□□ 0.28
CYB561A3-216ENST00000540755 ROBO3Q96MS0 1386 aa16.78■□□□□ 0.28
CYB561A3-216ENST00000540755 RASSF10A6NK89 507 aa16.77■□□□□ 0.28
CYB561A3-216ENST00000540755 VIL1P09327 827 aaKnown RBP16.77■□□□□ 0.28
CYB561A3-216ENST00000540755 GMPSP49915 693 aaPredicted RBP16.77■□□□□ 0.28
CYB561A3-216ENST00000540755 ST3GAL1Q11201 340 aa16.77■□□□□ 0.28
CYB561A3-216ENST00000540755 C12orf60Q5U649 245 aa16.77■□□□□ 0.28
CYB561A3-216ENST00000540755 KIAA0825Q8IV33 1275 aa16.77■□□□□ 0.28
CYB561A3-216ENST00000540755 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
CYB561A3-216ENST00000540755 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.28
CYB561A3-216ENST00000540755 FLT1P17948 1338 aa16.77■□□□□ 0.27
CYB561A3-216ENST00000540755 CYP2D7A0A087X1C5 515 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 ORC4O43929 436 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 KDM4AO75164 1064 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 USP17L8P0C7I0 530 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 APOBEC3HQ6NTF7 200 aaKnown RBP16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 RSBN1LQ6PCB5 846 aaPredicted RBP16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 USP50Q70EL3 339 aaPredicted RBP16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 MAPKAPK5Q8IW41 473 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 NKX2-3Q8TAU0 364 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 ESR2Q92731 530 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 GTF3C6Q969F1 213 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 ZNF274Q96GC6 653 aaPredicted RBP16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 INCENPQ9NQS7 918 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 ZSWIM5Q9P217 1185 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 ANGEL1Q9UNK9 670 aaKnown RBP16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
CYB561A3-216ENST00000540755 TRAF5O00463 557 aa16.75■□□□□ 0.27
CYB561A3-216ENST00000540755 SH2B2O14492 632 aaPredicted RBP16.75■□□□□ 0.27
CYB561A3-216ENST00000540755 PFKFB2O60825 505 aa16.75■□□□□ 0.27
CYB561A3-216ENST00000540755 RAD17O75943 681 aa16.75■□□□□ 0.27
CYB561A3-216ENST00000540755 NUCB2P80303 420 aa16.75■□□□□ 0.27
CYB561A3-216ENST00000540755 APOBRQ0VD83 1088 aa16.75■□□□□ 0.27
CYB561A3-216ENST00000540755 TNS4Q8IZW8 715 aa16.75■□□□□ 0.27
CYB561A3-216ENST00000540755 ADARB2Q9NS39 739 aaKnown RBP16.75■□□□□ 0.27
CYB561A3-216ENST00000540755 PSMD14O00487 310 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 FOXN1O15353 648 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 CYP2D6P10635 497 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 PDE4BQ07343 736 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 RAB3GAP1Q15042 981 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 RRP12Q5JTH9 1297 aaKnown RBP16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 CIAPIN1Q6FI81 312 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 NECAB1Q8N987 351 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 IGDCC4Q8TDY8 1250 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 CHMP4CQ96CF2 233 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 USP40Q9NVE5 1235 aa16.74■□□□□ 0.27
CYB561A3-216ENST00000540755 SHTN1A0MZ66 631 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 SMIM22K7EJ46 135 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 WDHD1O75717 1129 aaPredicted RBP16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 LIFRP42702 1097 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 CDC42EP5Q6NZY7 148 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 SGMS1Q86VZ5 419 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 AGBL3Q8NEM8 1001 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 GMLQ99445 158 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 SMC3Q9UQE7 1217 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 MYH8P13535 1937 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 POLR3DP05423 398 aaPredicted RBP16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 PDIA3P30101 505 aaKnown RBP16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 SCRN1Q12765 414 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 STK3Q13188 491 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 SART3Q15020 963 aaKnown RBP16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 CST9Q5W186 159 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 STK11IPQ8N1F8 1099 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 TRPM4Q8TD43 1214 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 LY9Q9HBG7 655 aa16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 GPHNQ9NQX3 736 aaPredicted RBP16.73■□□□□ 0.27
CYB561A3-216ENST00000540755 KLF18A0A0U1RQI7 1052 aa16.72■□□□□ 0.27
CYB561A3-216ENST00000540755 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
CYB561A3-216ENST00000540755 HIRAP54198 1017 aaPredicted RBP16.72■□□□□ 0.27
CYB561A3-216ENST00000540755 EVX2Q03828 476 aa16.72■□□□□ 0.27
CYB561A3-216ENST00000540755 TMEM67Q5HYA8 995 aa16.72■□□□□ 0.27
CYB561A3-216ENST00000540755 LLPHQ9BRT6 129 aaKnown RBP16.72■□□□□ 0.27
CYB561A3-216ENST00000540755 HDAC9Q9UKV0 1011 aa16.72■□□□□ 0.27
CYB561A3-216ENST00000540755 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
CYB561A3-216ENST00000540755 ABT1Q9ULW3 272 aaKnown RBP16.72■□□□□ 0.27
CYB561A3-216ENST00000540755 ERICH2A1L162 156 aa16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 IFIT3O14879 490 aaKnown RBP16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 PLCD1P51178 756 aa16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 RBM5P52756 815 aaKnown RBP eCLIP16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 TNIP1Q15025 636 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms