RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 ZNF280CQ8ND82 737 aa23.64■■□□□ 1.37
SOD2-212ENST00000540491 HTATIP2Q9BUP3 242 aa23.64■■□□□ 1.37
SOD2-212ENST00000540491 AS3MTQ9HBK9 375 aa23.64■■□□□ 1.37
SOD2-212ENST00000540491 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.64■■□□□ 1.37
SOD2-212ENST00000540491 TNPO2O14787 897 aaKnown RBP23.63■■□□□ 1.37
SOD2-212ENST00000540491 PPP4CP60510 307 aa23.63■■□□□ 1.37
SOD2-212ENST00000540491 ATP8B2P98198 1209 aa23.63■■□□□ 1.37
SOD2-212ENST00000540491 FAM110CQ1W6H9 321 aa23.63■■□□□ 1.37
SOD2-212ENST00000540491 PI16Q6UXB8 463 aa23.63■■□□□ 1.37
SOD2-212ENST00000540491 SSH3Q8TE77 659 aa23.63■■□□□ 1.37
SOD2-212ENST00000540491 CLUAP1Q96AJ1 413 aa23.63■■□□□ 1.37
SOD2-212ENST00000540491 COA7Q96BR5 231 aa23.63■■□□□ 1.37
SOD2-212ENST00000540491 GINM1Q9NU53 330 aa23.63■■□□□ 1.37
SOD2-212ENST00000540491 USP17L5A8MUK1 530 aa23.62■■□□□ 1.37
SOD2-212ENST00000540491 ADCY3O60266 1144 aa23.62■■□□□ 1.37
SOD2-212ENST00000540491 ECM2O94769 699 aaPredicted RBP23.62■■□□□ 1.37
SOD2-212ENST00000540491 FLT3LGP49771 235 aa23.62■■□□□ 1.37
SOD2-212ENST00000540491 TNNI3KQ59H18 835 aa23.62■■□□□ 1.37
SOD2-212ENST00000540491 TTC39AQ5SRH9 613 aa23.62■■□□□ 1.37
SOD2-212ENST00000540491 NAA16Q6N069 864 aaPredicted RBP23.62■■□□□ 1.37
SOD2-212ENST00000540491 FPGT-TNNI3KV9GXZ4 949 aa23.62■■□□□ 1.37
SOD2-212ENST00000540491 SPP2Q13103 211 aa23.61■■□□□ 1.37
SOD2-212ENST00000540491 OS9Q13438 667 aaPredicted RBP23.61■■□□□ 1.37
SOD2-212ENST00000540491 SH3D19Q5HYK7 790 aa23.61■■□□□ 1.37
SOD2-212ENST00000540491 TMED8Q6PL24 325 aaPredicted RBP23.61■■□□□ 1.37
SOD2-212ENST00000540491 CERS3Q8IU89 383 aa23.61■■□□□ 1.37
SOD2-212ENST00000540491 FOXP4Q8IVH2 680 aaPredicted RBP23.61■■□□□ 1.37
SOD2-212ENST00000540491 TMEM57Q8N5G2 664 aa23.61■■□□□ 1.37
SOD2-212ENST00000540491 SHISA4Q96DD7 197 aa23.61■■□□□ 1.37
SOD2-212ENST00000540491 ZSWIM8A7E2V4 1837 aa23.61■■□□□ 1.37
SOD2-212ENST00000540491 DOCK1Q14185 1865 aa23.6■■□□□ 1.37
SOD2-212ENST00000540491 ASNSP08243 561 aa23.6■■□□□ 1.37
SOD2-212ENST00000540491 UBE2Q1Q7Z7E8 422 aa23.6■■□□□ 1.37
SOD2-212ENST00000540491 GABRQQ9UN88 632 aa23.6■■□□□ 1.37
SOD2-212ENST00000540491 SGPL1O95470 568 aa23.59■■□□□ 1.37
SOD2-212ENST00000540491 METTL16Q86W50 562 aaKnown RBP23.59■■□□□ 1.37
SOD2-212ENST00000540491 FTSJ3Q8IY81 847 aaKnown RBP23.59■■□□□ 1.37
SOD2-212ENST00000540491 ANKRD13CQ8N6S4 541 aa23.59■■□□□ 1.37
SOD2-212ENST00000540491 U2AF1L4Q8WU68 220 aaKnown RBP23.59■■□□□ 1.37
SOD2-212ENST00000540491 DPF3Q92784 378 aa23.59■■□□□ 1.37
SOD2-212ENST00000540491 WDR18Q9BV38 432 aa23.59■■□□□ 1.37
SOD2-212ENST00000540491 NOP58Q9Y2X3 529 aaKnown RBP23.59■■□□□ 1.37
SOD2-212ENST00000540491 SURF6O75683 361 aaKnown RBP23.58■■□□□ 1.37
SOD2-212ENST00000540491 SH3RF3Q8TEJ3 882 aaPredicted RBP23.58■■□□□ 1.37
SOD2-212ENST00000540491 H0YGN5 161 aa23.57■■□□□ 1.36
SOD2-212ENST00000540491 SLURP2P0DP57 97 aa23.57■■□□□ 1.36
SOD2-212ENST00000540491 TREML2Q5T2D2 321 aa23.57■■□□□ 1.36
SOD2-212ENST00000540491 DBNDD2Q9BQY9 259 aa23.57■■□□□ 1.36
SOD2-212ENST00000540491 AATFQ9NY61 560 aaKnown RBP eCLIP23.57■■□□□ 1.36
SOD2-212ENST00000540491 TNNQ9UQP3 1299 aa23.57■■□□□ 1.36
SOD2-212ENST00000540491 COLQQ9Y215 455 aaPredicted RBP23.57■■□□□ 1.36
SOD2-212ENST00000540491 NR2E3Q9Y5X4 410 aa23.57■■□□□ 1.36
SOD2-212ENST00000540491 FAM196BA6NMK8 535 aa23.56■■□□□ 1.36
SOD2-212ENST00000540491 C19orf81C9J6K1 198 aa23.56■■□□□ 1.36
SOD2-212ENST00000540491 FXR1P51114 621 aaKnown RBP eCLIP23.56■■□□□ 1.36
SOD2-212ENST00000540491 HMGCS2P54868 508 aa23.56■■□□□ 1.36
SOD2-212ENST00000540491 TRIM34Q9BYJ4 488 aa23.56■■□□□ 1.36
SOD2-212ENST00000540491 PTPRFP10586 1907 aa23.56■■□□□ 1.36
SOD2-212ENST00000540491 CEP290O15078 2479 aa23.55■■□□□ 1.36
SOD2-212ENST00000540491 PHIPQ8WWQ0 1821 aa23.55■■□□□ 1.36
SOD2-212ENST00000540491 INHAP05111 366 aa23.55■■□□□ 1.36
SOD2-212ENST00000540491 CYP2E1P05181 493 aaPredicted RBP23.55■■□□□ 1.36
SOD2-212ENST00000540491 UNC93B1Q9H1C4 597 aa23.55■■□□□ 1.36
SOD2-212ENST00000540491 TMOD4Q9NZQ9 345 aa23.55■■□□□ 1.36
SOD2-212ENST00000540491 FARP2O94887 1054 aaPredicted RBP23.54■■□□□ 1.36
SOD2-212ENST00000540491 HOXA7P31268 230 aaPredicted RBP23.54■■□□□ 1.36
SOD2-212ENST00000540491 BACE1P56817 501 aa23.54■■□□□ 1.36
SOD2-212ENST00000540491 CCDC84Q86UT8 332 aaPredicted RBP23.54■■□□□ 1.36
SOD2-212ENST00000540491 CRACR2BQ8N4Y2 399 aaPredicted RBP23.54■■□□□ 1.36
SOD2-212ENST00000540491 TGFBRAP1Q8WUH2 860 aa23.54■■□□□ 1.36
SOD2-212ENST00000540491 ASCC2Q9H1I8 757 aaPredicted RBP23.54■■□□□ 1.36
SOD2-212ENST00000540491 PAK6Q9NQU5 681 aaPredicted RBP23.54■■□□□ 1.36
SOD2-212ENST00000540491 SNRKQ9NRH2 765 aa23.54■■□□□ 1.36
SOD2-212ENST00000540491 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.54■■□□□ 1.36
SOD2-212ENST00000540491 MGAMO43451 1857 aa23.53■■□□□ 1.36
SOD2-212ENST00000540491 ZBTB7BO15156 539 aaPredicted RBP23.53■■□□□ 1.36
SOD2-212ENST00000540491 HLA-DOAP06340 250 aa23.53■■□□□ 1.36
SOD2-212ENST00000540491 GTF3C2Q8WUA4 911 aaPredicted RBP23.53■■□□□ 1.36
SOD2-212ENST00000540491 MORF4L1Q9UBU8 362 aa23.53■■□□□ 1.36
SOD2-212ENST00000540491 FLT1P17948 1338 aa23.53■■□□□ 1.36
SOD2-212ENST00000540491 TFRCP02786 760 aaKnown RBP23.52■■□□□ 1.36
SOD2-212ENST00000540491 ELNP15502 786 aa23.52■■□□□ 1.36
SOD2-212ENST00000540491 IRX3P78415 501 aaPredicted RBP23.52■■□□□ 1.36
SOD2-212ENST00000540491 ERC1Q8IUD2 1116 aa23.52■■□□□ 1.36
SOD2-212ENST00000540491 ITPRIPQ8IWB1 547 aa23.52■■□□□ 1.36
SOD2-212ENST00000540491 USP17L10C9JJH3 530 aa23.51■■□□□ 1.35
SOD2-212ENST00000540491 ZAP70P43403 619 aa23.51■■□□□ 1.35
SOD2-212ENST00000540491 RRP1BQ14684 758 aaKnown RBP23.51■■□□□ 1.35
SOD2-212ENST00000540491 MAPKAPK5Q8IW41 473 aa23.51■■□□□ 1.35
SOD2-212ENST00000540491 CRISPLD2Q9H0B8 497 aa23.51■■□□□ 1.35
SOD2-212ENST00000540491 DBNLQ9UJU6 430 aaKnown RBP23.51■■□□□ 1.35
SOD2-212ENST00000540491 HMGCRP04035 888 aa23.5■■□□□ 1.35
SOD2-212ENST00000540491 ANKLE1Q8NAG6 615 aa23.5■■□□□ 1.35
SOD2-212ENST00000540491 DEFB118Q96PH6 123 aa23.5■■□□□ 1.35
SOD2-212ENST00000540491 MTMR2Q13614 643 aa23.49■■□□□ 1.35
SOD2-212ENST00000540491 HSP90AB4PQ58FF6 505 aa23.49■■□□□ 1.35
SOD2-212ENST00000540491 GJD2Q9UKL4 321 aa23.49■■□□□ 1.35
SOD2-212ENST00000540491 TAOK2Q9UL54 1235 aa23.49■■□□□ 1.35
SOD2-212ENST00000540491 PALD1Q9ULE6 856 aa23.49■■□□□ 1.35
SOD2-212ENST00000540491 LOC285556D6RIA3 1793 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms