RNA–Protein interactions for RNA: ENST00000540394.5

C1R-206, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-206ENST00000540394 CACNB3P54284 484 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 MFSD6Q6ZSS7 791 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 MYL10Q9BUA6 226 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
C1R-206ENST00000540394 NFIAQ12857 509 aa13.46□□□□□ -0.25
C1R-206ENST00000540394 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.25
C1R-206ENST00000540394 PLCD4Q9BRC7 762 aa13.46□□□□□ -0.25
C1R-206ENST00000540394 SH2B1Q9NRF2 756 aaPredicted RBP13.46□□□□□ -0.25
C1R-206ENST00000540394 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
C1R-206ENST00000540394 MYH6P13533 1939 aa13.46□□□□□ -0.25
C1R-206ENST00000540394 USP17L3A6NCW0 530 aa13.46□□□□□ -0.25
C1R-206ENST00000540394 USP17L4A6NCW7 530 aa13.46□□□□□ -0.25
C1R-206ENST00000540394 GSTO1P78417 241 aa13.46□□□□□ -0.25
C1R-206ENST00000540394 ANKRD1Q15327 319 aa13.46□□□□□ -0.25
C1R-206ENST00000540394 DALRD3Q5D0E6 543 aaKnown RBP13.46□□□□□ -0.25
C1R-206ENST00000540394 GIMAP6Q6P9H5 292 aa13.46□□□□□ -0.25
C1R-206ENST00000540394 USP17L1Q7RTZ2 530 aa13.46□□□□□ -0.25
C1R-206ENST00000540394 RALYLQ86SE5 291 aaKnown RBP13.46□□□□□ -0.25
C1R-206ENST00000540394 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
C1R-206ENST00000540394 SHTN1A0MZ66 631 aa13.46□□□□□ -0.26
C1R-206ENST00000540394 G3V3G9 751 aa13.46□□□□□ -0.26
C1R-206ENST00000540394 PFKFB2O60825 505 aa13.46□□□□□ -0.26
C1R-206ENST00000540394 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.26
C1R-206ENST00000540394 RASSF7Q02833 373 aa13.46□□□□□ -0.26
C1R-206ENST00000540394 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.26
C1R-206ENST00000540394 C12orf60Q5U649 245 aa13.46□□□□□ -0.26
C1R-206ENST00000540394 CC2D2BQ6DHV5 1058 aa13.46□□□□□ -0.26
C1R-206ENST00000540394 RTKN2Q8IZC4 609 aa13.46□□□□□ -0.26
C1R-206ENST00000540394 UBE2Q2LH0YL09 131 aa13.45□□□□□ -0.26
C1R-206ENST00000540394 ZSCAN31Q96LW9 406 aaPredicted RBP13.45□□□□□ -0.26
C1R-206ENST00000540394 PSMD14O00487 310 aa13.45□□□□□ -0.26
C1R-206ENST00000540394 SYT1P21579 422 aa13.45□□□□□ -0.26
C1R-206ENST00000540394 USP5P45974 858 aa13.45□□□□□ -0.26
C1R-206ENST00000540394 FAM47AQ5JRC9 791 aa13.45□□□□□ -0.26
C1R-206ENST00000540394 CDC42EP5Q6NZY7 148 aa13.45□□□□□ -0.26
C1R-206ENST00000540394 ARID3AQ99856 593 aa13.45□□□□□ -0.26
C1R-206ENST00000540394 CWC22Q9HCG8 908 aaKnown RBP13.45□□□□□ -0.26
C1R-206ENST00000540394 BCS1LQ9Y276 419 aa13.45□□□□□ -0.26
C1R-206ENST00000540394 CD2APQ9Y5K6 639 aa13.45□□□□□ -0.26
C1R-206ENST00000540394 DICER1Q9UPY3 1922 aaKnown RBP13.45□□□□□ -0.26
C1R-206ENST00000540394 KLF18A0A0U1RQI7 1052 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 CRKP46108 304 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 SBK1Q52WX2 424 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 TEX11Q8IYF3 940 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 WDR19Q8NEZ3 1342 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 BRD1O95696 1058 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 CDC27P30260 824 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 NSUN7Q8NE18 718 aaKnown RBP13.44□□□□□ -0.26
C1R-206ENST00000540394 TOMM22Q9NS69 142 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 FAM217BQ9NTX9 383 aaPredicted RBP13.44□□□□□ -0.26
C1R-206ENST00000540394 ANGEL1Q9UNK9 670 aaKnown RBP13.44□□□□□ -0.26
C1R-206ENST00000540394 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 BAZ2BQ9UIF8 2168 aaKnown RBP13.44□□□□□ -0.26
C1R-206ENST00000540394 BAG3O95817 575 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 PICALMQ13492 652 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 SEC23AQ15436 765 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 LARGE2Q8N3Y3 721 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 SUGT1Q9Y2Z0 365 aa13.44□□□□□ -0.26
C1R-206ENST00000540394 GREB1LQ9C091 1923 aaPredicted RBP13.44□□□□□ -0.26
C1R-206ENST00000540394 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
C1R-206ENST00000540394 TRDNQ13061 729 aa13.43□□□□□ -0.26
C1R-206ENST00000540394 GMLQ99445 158 aa13.43□□□□□ -0.26
C1R-206ENST00000540394 ARPP21Q9UBL0 812 aaPredicted RBP13.43□□□□□ -0.26
C1R-206ENST00000540394 APOA5Q6Q788 366 aa13.43□□□□□ -0.26
C1R-206ENST00000540394 DDX11Q96FC9 970 aa13.43□□□□□ -0.26
C1R-206ENST00000540394 ZNF274Q96GC6 653 aaPredicted RBP13.43□□□□□ -0.26
C1R-206ENST00000540394 LDHCP07864 332 aa13.43□□□□□ -0.26
C1R-206ENST00000540394 IARSP41252 1262 aaKnown RBP13.43□□□□□ -0.26
C1R-206ENST00000540394 ENAHQ8N8S7 591 aaPredicted RBP13.43□□□□□ -0.26
C1R-206ENST00000540394 ZDHHC15Q96MV8 337 aa13.43□□□□□ -0.26
C1R-206ENST00000540394 IL17RBQ9NRM6 502 aa13.43□□□□□ -0.26
C1R-206ENST00000540394 FOXD4L6Q3SYB3 417 aaPredicted RBP13.42□□□□□ -0.26
C1R-206ENST00000540394 HHIPL2Q6UWX4 724 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 FOXD4L3Q6VB84 417 aaPredicted RBP13.42□□□□□ -0.26
C1R-206ENST00000540394 SUPT20HQ8NEM7 779 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 SMARCC2Q8TAQ2 1214 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 SMC3Q9UQE7 1217 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 TNKSO95271 1327 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 GOLGA8BA8MQT2 603 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 ADD1P35611 737 aaKnown RBP13.42□□□□□ -0.26
C1R-206ENST00000540394 TMEM67Q5HYA8 995 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 TEKT1Q969V4 418 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 PRMT6Q96LA8 375 aaPredicted RBP13.42□□□□□ -0.26
C1R-206ENST00000540394 KRT23Q9C075 422 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 FHDC1Q9C0D6 1143 aaPredicted RBP13.42□□□□□ -0.26
C1R-206ENST00000540394 GJB4Q9NTQ9 266 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.42□□□□□ -0.26
C1R-206ENST00000540394 FKBP1AP62942 108 aaKnown RBP13.42□□□□□ -0.26
C1R-206ENST00000540394 CDC37L1Q7L3B6 337 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 SGMS1Q86VZ5 419 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 CERS3Q8IU89 383 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 CNNM2Q9H8M5 875 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 USP40Q9NVE5 1235 aa13.42□□□□□ -0.26
C1R-206ENST00000540394 IFIT3O14879 490 aaKnown RBP13.41□□□□□ -0.26
C1R-206ENST00000540394 RANBP6O60518 1105 aaKnown RBP13.41□□□□□ -0.26
C1R-206ENST00000540394 EGFRP00533 1210 aa13.41□□□□□ -0.26
C1R-206ENST00000540394 VIL1P09327 827 aaKnown RBP13.41□□□□□ -0.26
C1R-206ENST00000540394 CXCL9Q07325 125 aa13.41□□□□□ -0.26
C1R-206ENST00000540394 SHROOM1Q2M3G4 852 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms