RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 CBFA2T2O43439 604 aa14.29□□□□□ -0.12
NEK6-213ENST00000540326 TOP1P11387 765 aaKnown RBP14.29□□□□□ -0.12
NEK6-213ENST00000540326 BCAMP50895 628 aa14.29□□□□□ -0.12
NEK6-213ENST00000540326 SAFBQ15424 915 aaKnown RBP eCLIP14.29□□□□□ -0.12
NEK6-213ENST00000540326 ZNF827Q17R98 1081 aa14.29□□□□□ -0.12
NEK6-213ENST00000540326 GRAMD1CQ8IYS0 662 aa14.29□□□□□ -0.12
NEK6-213ENST00000540326 PDILTQ8N807 584 aa14.29□□□□□ -0.12
NEK6-213ENST00000540326 NUP133Q8WUM0 1156 aa14.29□□□□□ -0.12
NEK6-213ENST00000540326 CNNM2Q9H8M5 875 aa14.29□□□□□ -0.12
NEK6-213ENST00000540326 L2HGDHQ9H9P8 463 aa14.29□□□□□ -0.12
NEK6-213ENST00000540326 DNAI1Q9UI46 699 aa14.29□□□□□ -0.12
NEK6-213ENST00000540326 KCNJ6P48051 423 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 MDM2Q00987 491 aaPredicted RBP14.28□□□□□ -0.12
NEK6-213ENST00000540326 WTAPQ15007 396 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 RTN1Q16799 776 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 VSTM4Q8IW00 320 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 TRIM22Q8IYM9 498 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 KRT23Q9C075 422 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 INTS13Q9NVM9 706 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 IQSEC3Q9UPP2 1182 aaPredicted RBP14.28□□□□□ -0.12
NEK6-213ENST00000540326 PCDHB6Q9Y5E3 794 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 ITGB4P16144 1822 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 NUP98P52948 1817 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 PRR29P0C7W0 189 aa14.28□□□□□ -0.12
NEK6-213ENST00000540326 MORC2Q9Y6X9 1032 aaPredicted RBP14.28□□□□□ -0.12
NEK6-213ENST00000540326 STK36Q9NRP7 1315 aa14.27□□□□□ -0.12
NEK6-213ENST00000540326 ETF1P62495 437 aaKnown RBP14.27□□□□□ -0.13
NEK6-213ENST00000540326 POSTNQ15063 836 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 CCDC93Q567U6 631 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 SUSD4Q5VX71 490 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 TRMT44Q8IYL2 757 aaKnown RBP14.27□□□□□ -0.13
NEK6-213ENST00000540326 ZNF34Q8IZ26 560 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 FAM177A1Q8N128 213 aaPredicted RBP14.27□□□□□ -0.13
NEK6-213ENST00000540326 OXER1Q8TDS5 423 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 WASF1Q92558 559 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 SERTAD1Q9UHV2 236 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 FBXO2Q9UK22 296 aaPredicted RBP14.27□□□□□ -0.13
NEK6-213ENST00000540326 LRP6O75581 1613 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 CHD4Q14839 1912 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 BCL9O00512 1426 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 A0A0G2JS52 829 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 FMR1Q06787 632 aaKnown RBP eCLIP14.27□□□□□ -0.13
NEK6-213ENST00000540326 DHX8Q14562 1220 aaKnown RBP14.27□□□□□ -0.13
NEK6-213ENST00000540326 SART3Q15020 963 aaKnown RBP14.27□□□□□ -0.13
NEK6-213ENST00000540326 MAN1B1Q9UKM7 699 aa14.27□□□□□ -0.13
NEK6-213ENST00000540326 ERICH2A1L162 156 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 SMIM22K7EJ46 135 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 FANCGO15287 622 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 USP49Q70CQ1 688 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 NACAP1Q9BZK3 213 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 TMX1Q9H3N1 280 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 LRP2BPQ9P2M1 347 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 NFE2L3Q9Y4A8 694 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.26□□□□□ -0.13
NEK6-213ENST00000540326 ANKRD36CQ5JPF3 1778 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 SLIT2O94813 1529 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 ERVV-1B6SEH8 477 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 CDK11BP21127 795 aaKnown RBP14.26□□□□□ -0.13
NEK6-213ENST00000540326 PTPREP23469 700 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 TRIM65Q6PJ69 517 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 CRACR2BQ8N4Y2 399 aaPredicted RBP14.26□□□□□ -0.13
NEK6-213ENST00000540326 SDR42E1Q8WUS8 393 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 STAG1Q8WVM7 1258 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 CABP5Q9NP86 173 aa14.26□□□□□ -0.13
NEK6-213ENST00000540326 ABCA3Q99758 1704 aa14.25□□□□□ -0.13
NEK6-213ENST00000540326 MINDY4BA8MYZ0 360 aa14.25□□□□□ -0.13
NEK6-213ENST00000540326 IL6STP40189 918 aaPredicted RBP14.25□□□□□ -0.13
NEK6-213ENST00000540326 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
NEK6-213ENST00000540326 FANCBQ8NB91 859 aa14.25□□□□□ -0.13
NEK6-213ENST00000540326 FOXP1Q9H334 677 aaPredicted RBP14.25□□□□□ -0.13
NEK6-213ENST00000540326 ZNF446Q9NWS9 450 aa14.25□□□□□ -0.13
NEK6-213ENST00000540326 HOOK1Q9UJC3 728 aaKnown RBP14.25□□□□□ -0.13
NEK6-213ENST00000540326 DEXIO95424 95 aa14.25□□□□□ -0.13
NEK6-213ENST00000540326 AEBP2Q6ZN18 517 aaPredicted RBP14.25□□□□□ -0.13
NEK6-213ENST00000540326 ADGRA1Q86SQ6 560 aa14.25□□□□□ -0.13
NEK6-213ENST00000540326 TMEM139Q8IV31 216 aa14.25□□□□□ -0.13
NEK6-213ENST00000540326 REXO1L1PQ8IX06 675 aa14.25□□□□□ -0.13
NEK6-213ENST00000540326 ZNF654Q8IZM8 581 aa14.25□□□□□ -0.13
NEK6-213ENST00000540326 hCG_1642624A0A1W2PR95 340 aa14.24□□□□□ -0.13
NEK6-213ENST00000540326 FAM205CA6NFA0 338 aa14.24□□□□□ -0.13
NEK6-213ENST00000540326 ADKP55263 362 aaKnown RBP14.24□□□□□ -0.13
NEK6-213ENST00000540326 KRT222Q8N1A0 295 aa14.24□□□□□ -0.13
NEK6-213ENST00000540326 SMARCE1Q969G3 411 aa14.24□□□□□ -0.13
NEK6-213ENST00000540326 CCP110O43303 1012 aa14.24□□□□□ -0.13
NEK6-213ENST00000540326 URI1O94763 535 aaPredicted RBP14.24□□□□□ -0.13
NEK6-213ENST00000540326 ARHGAP29Q52LW3 1261 aa14.24□□□□□ -0.13
NEK6-213ENST00000540326 UBAC1Q9BSL1 405 aa14.24□□□□□ -0.13
NEK6-213ENST00000540326 CSRNP2Q9H175 543 aa14.24□□□□□ -0.13
NEK6-213ENST00000540326 ABCF2Q9UG63 623 aa14.24□□□□□ -0.13
NEK6-213ENST00000540326 GNAT2P19087 354 aa14.23□□□□□ -0.13
NEK6-213ENST00000540326 PPARAQ07869 468 aa14.23□□□□□ -0.13
NEK6-213ENST00000540326 MED15Q96RN5 788 aa14.23□□□□□ -0.13
NEK6-213ENST00000540326 SAMSN1Q9NSI8 373 aaKnown RBP14.23□□□□□ -0.13
NEK6-213ENST00000540326 PPP2R2CQ9Y2T4 447 aa14.23□□□□□ -0.13
NEK6-213ENST00000540326 PHLPP2Q6ZVD8 1323 aa14.23□□□□□ -0.13
NEK6-213ENST00000540326 ZNF335Q9H4Z2 1342 aaPredicted RBP14.23□□□□□ -0.13
NEK6-213ENST00000540326 CCDC196A0A1B0GTZ2 297 aa14.23□□□□□ -0.13
NEK6-213ENST00000540326 SHISA4Q96DD7 197 aa14.23□□□□□ -0.13
NEK6-213ENST00000540326 BAG1Q99933 345 aaPredicted RBP14.23□□□□□ -0.13
NEK6-213ENST00000540326 TNKSO95271 1327 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms