RNA–Protein interactions for RNA: ENST00000540280.1

TMEM109-203, Transcript of transmembrane protein 109, humanhuman

TSL 3

Gene TMEM109, Length 724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM109-203ENST00000540280 GREM2Q9H772 168 aa13.78□□□□□ -0.2
TMEM109-203ENST00000540280 HYPKQ9NX55 129 aa13.78□□□□□ -0.2
TMEM109-203ENST00000540280 CHPF2Q9P2E5 772 aa13.78□□□□□ -0.2
TMEM109-203ENST00000540280 SLC45A1Q9Y2W3 748 aa13.78□□□□□ -0.2
TMEM109-203ENST00000540280 CHD8Q9HCK8 2581 aa13.78□□□□□ -0.2
TMEM109-203ENST00000540280 GFRA3O60609 400 aa13.77□□□□□ -0.21
TMEM109-203ENST00000540280 TRIOO75962 3097 aa13.77□□□□□ -0.21
TMEM109-203ENST00000540280 HSP90B1P14625 803 aaKnown RBP13.77□□□□□ -0.21
TMEM109-203ENST00000540280 IL1R1P14778 569 aa13.77□□□□□ -0.21
TMEM109-203ENST00000540280 CRKP46108 304 aa13.77□□□□□ -0.21
TMEM109-203ENST00000540280 KCNJ4P48050 445 aa13.77□□□□□ -0.21
TMEM109-203ENST00000540280 SLFN5Q08AF3 891 aa13.77□□□□□ -0.21
TMEM109-203ENST00000540280 ZNF112Q9UJU3 913 aa13.77□□□□□ -0.21
TMEM109-203ENST00000540280 DNM1LO00429 736 aa13.76□□□□□ -0.21
TMEM109-203ENST00000540280 VAMP4O75379 141 aa13.76□□□□□ -0.21
TMEM109-203ENST00000540280 EXOSC9Q06265 439 aaKnown RBP13.76□□□□□ -0.21
TMEM109-203ENST00000540280 NOL9Q5SY16 702 aaKnown RBP13.76□□□□□ -0.21
TMEM109-203ENST00000540280 HERVK_113Q902F9 699 aa13.76□□□□□ -0.21
TMEM109-203ENST00000540280 HOOK2Q96ED9 719 aa13.76□□□□□ -0.21
TMEM109-203ENST00000540280 MYO15AQ9UKN7 3530 aa13.76□□□□□ -0.21
TMEM109-203ENST00000540280 PCCAP05165 728 aaPredicted RBP13.75□□□□□ -0.21
TMEM109-203ENST00000540280 CTSWP56202 376 aa13.75□□□□□ -0.21
TMEM109-203ENST00000540280 FPGSQ05932 587 aa13.75□□□□□ -0.21
TMEM109-203ENST00000540280 TREML2Q5T2D2 321 aa13.75□□□□□ -0.21
TMEM109-203ENST00000540280 GJC2Q5T442 439 aaPredicted RBP13.75□□□□□ -0.21
TMEM109-203ENST00000540280 ERMP1Q7Z2K6 904 aa13.75□□□□□ -0.21
TMEM109-203ENST00000540280 TRMT2AQ8IZ69 625 aaKnown RBP13.75□□□□□ -0.21
TMEM109-203ENST00000540280 PRSS33Q8NF86 280 aa13.75□□□□□ -0.21
TMEM109-203ENST00000540280 STK31Q9BXU1 1019 aa13.75□□□□□ -0.21
TMEM109-203ENST00000540280 NKX2-4Q9H2Z4 354 aa13.75□□□□□ -0.21
TMEM109-203ENST00000540280 ZHX2Q9Y6X8 837 aa13.75□□□□□ -0.21
TMEM109-203ENST00000540280 CFAP47Q6ZTR5 3102 aa13.74□□□□□ -0.21
TMEM109-203ENST00000540280 XRCC5P13010 732 aaKnown RBP13.74□□□□□ -0.21
TMEM109-203ENST00000540280 SNX17Q15036 470 aa13.74□□□□□ -0.21
TMEM109-203ENST00000540280 MFSD14BQ5SR56 506 aa13.74□□□□□ -0.21
TMEM109-203ENST00000540280 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.74□□□□□ -0.21
TMEM109-203ENST00000540280 ANKRD2Q9GZV1 360 aa13.74□□□□□ -0.21
TMEM109-203ENST00000540280 BRWD1Q9NSI6 2320 aa13.74□□□□□ -0.21
TMEM109-203ENST00000540280 HNRNPUQ00839 825 aaKnown RBP eCLIP13.73□□□□□ -0.21
TMEM109-203ENST00000540280 TLE2Q04725 743 aa13.73□□□□□ -0.21
TMEM109-203ENST00000540280 GRIK5Q16478 980 aa13.73□□□□□ -0.21
TMEM109-203ENST00000540280 FAM83AQ86UY5 434 aa13.73□□□□□ -0.21
TMEM109-203ENST00000540280 TTLL11Q8NHH1 800 aa13.73□□□□□ -0.21
TMEM109-203ENST00000540280 LPAR1Q92633 364 aa13.73□□□□□ -0.21
TMEM109-203ENST00000540280 PTPRZ1P23471 2315 aaPredicted RBP13.73□□□□□ -0.21
TMEM109-203ENST00000540280 PEX10O60683 326 aa13.72□□□□□ -0.21
TMEM109-203ENST00000540280 ZNF804AQ7Z570 1209 aa13.72□□□□□ -0.21
TMEM109-203ENST00000540280 CDCA7LQ96GN5 454 aa13.72□□□□□ -0.21
TMEM109-203ENST00000540280 NUDT12Q9BQG2 462 aa13.72□□□□□ -0.21
TMEM109-203ENST00000540280 PHAXQ9H814 394 aaKnown RBP13.72□□□□□ -0.21
TMEM109-203ENST00000540280 DDX20Q9UHI6 824 aaKnown RBP13.72□□□□□ -0.21
TMEM109-203ENST00000540280 COG5Q9UP83 839 aa13.72□□□□□ -0.21
TMEM109-203ENST00000540280 AGTPBP1Q9UPW5 1226 aa13.72□□□□□ -0.21
TMEM109-203ENST00000540280 AFG3L2Q9Y4W6 797 aa13.72□□□□□ -0.21
TMEM109-203ENST00000540280 LOC285556D6RIA3 1793 aa13.72□□□□□ -0.21
TMEM109-203ENST00000540280 DOCK1Q14185 1865 aa13.72□□□□□ -0.21
TMEM109-203ENST00000540280 CHD6Q8TD26 2715 aa13.71□□□□□ -0.21
TMEM109-203ENST00000540280 TAF5LO75529 589 aa13.71□□□□□ -0.21
TMEM109-203ENST00000540280 DDX58O95786 925 aaKnown RBP13.71□□□□□ -0.21
TMEM109-203ENST00000540280 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.21
TMEM109-203ENST00000540280 RAG1P15918 1043 aa13.71□□□□□ -0.21
TMEM109-203ENST00000540280 CHRNDQ07001 517 aa13.71□□□□□ -0.21
TMEM109-203ENST00000540280 HFE2Q6ZVN8 426 aa13.71□□□□□ -0.21
TMEM109-203ENST00000540280 GJD3Q8N144 294 aa13.71□□□□□ -0.21
TMEM109-203ENST00000540280 MYD88Q99836 296 aa13.71□□□□□ -0.21
TMEM109-203ENST00000540280 YBX2Q9Y2T7 364 aaKnown RBP13.71□□□□□ -0.21
TMEM109-203ENST00000540280 ATRXP46100 2492 aa13.71□□□□□ -0.21
TMEM109-203ENST00000540280 ZBED9Q6R2W3 1325 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 ALADP13716 330 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 PTPRAP18433 802 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 IGHMBP2P38935 993 aaKnown RBP13.7□□□□□ -0.22
TMEM109-203ENST00000540280 KRT40Q6A162 431 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 C15orf52Q6ZUT6 534 aaKnown RBP13.7□□□□□ -0.22
TMEM109-203ENST00000540280 TRMT44Q8IYL2 757 aaKnown RBP13.7□□□□□ -0.22
TMEM109-203ENST00000540280 SOCS4Q8WXH5 440 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 FERMT2Q96AC1 680 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 SLC28A3Q9HAS3 691 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.7□□□□□ -0.22
TMEM109-203ENST00000540280 MSRAQ9UJ68 235 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 PNMA3Q9UL41 463 aa13.7□□□□□ -0.22
TMEM109-203ENST00000540280 DOCK2Q92608 1830 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 RFXAPO00287 272 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 KIAA0355O15063 1070 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 CLTBP09497 229 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 CNGA1P29973 690 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 GCLCP48506 637 aaPredicted RBP13.69□□□□□ -0.22
TMEM109-203ENST00000540280 RASIP1Q5U651 963 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 C16orf59Q7L2K0 433 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 CCDC84Q86UT8 332 aaPredicted RBP13.69□□□□□ -0.22
TMEM109-203ENST00000540280 USP6NLQ92738 828 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 HLA-CQ95604 372 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 FAM86C1Q9NVL1 165 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 TMOD2Q9NZR1 351 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 TACC3Q9Y6A5 838 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 MTCH2Q9Y6C9 303 aa13.69□□□□□ -0.22
TMEM109-203ENST00000540280 RGS20O76081 388 aa13.68□□□□□ -0.22
TMEM109-203ENST00000540280 RAB30Q15771 203 aa13.68□□□□□ -0.22
TMEM109-203ENST00000540280 SCYL3Q8IZE3 742 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms