RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
CCDC130-202ENST00000540216 MS4A4AQ96JQ5 239 aa16.17■□□□□ 0.18
CCDC130-202ENST00000540216 CFHR5Q9BXR6 569 aa16.17■□□□□ 0.18
CCDC130-202ENST00000540216 PICK1Q9NRD5 415 aa16.17■□□□□ 0.18
CCDC130-202ENST00000540216 STAP2Q9UGK3 403 aa16.17■□□□□ 0.18
CCDC130-202ENST00000540216 TSKSQ9UJT2 592 aa16.17■□□□□ 0.18
CCDC130-202ENST00000540216 IGHDP01880 384 aa16.16■□□□□ 0.18
CCDC130-202ENST00000540216 CETPP11597 493 aa16.16■□□□□ 0.18
CCDC130-202ENST00000540216 SNAPC2Q13487 334 aa16.16■□□□□ 0.18
CCDC130-202ENST00000540216 TRIM34Q9BYJ4 488 aa16.16■□□□□ 0.18
CCDC130-202ENST00000540216 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
CCDC130-202ENST00000540216 DDX60LQ5H9U9 1706 aaKnown RBP16.16■□□□□ 0.18
CCDC130-202ENST00000540216 MYH1P12882 1939 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 SIPA1L1O43166 1804 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 IRF6O14896 467 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 MBD4O95243 580 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 IRX6P78412 446 aaPredicted RBP16.15■□□□□ 0.18
CCDC130-202ENST00000540216 NUCB1Q02818 461 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 NOM1Q5C9Z4 860 aaKnown RBP16.15■□□□□ 0.18
CCDC130-202ENST00000540216 COL13A1Q5TAT6 717 aaPredicted RBP16.15■□□□□ 0.18
CCDC130-202ENST00000540216 TTC6Q86TZ1 520 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 CHD1LQ86WJ1 897 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 LCORLQ8N3X6 602 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
CCDC130-202ENST00000540216 NAV1Q8NEY1 1877 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 EHD4Q9H223 541 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 SAP30BPQ9UHR5 308 aaKnown RBP16.15■□□□□ 0.18
CCDC130-202ENST00000540216 KCNH4Q9UQ05 1017 aa16.15■□□□□ 0.18
CCDC130-202ENST00000540216 CCL15-CCL14A0A0B4J2E2 113 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 IGF2BP3O00425 579 aaKnown RBP eCLIP16.14■□□□□ 0.17
CCDC130-202ENST00000540216 PTPRAP18433 802 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 CAP2P40123 477 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 PDE1AP54750 535 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 CCL15Q16663 113 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 BRI3BPQ8WY22 251 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 APPBP2Q92624 585 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 TBC1D2Q9BYX2 928 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 LNPKQ9C0E8 428 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 ARMT1Q9H993 441 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 ZCCHC17Q9NP64 241 aaKnown RBP16.14■□□□□ 0.17
CCDC130-202ENST00000540216 ATP8A2Q9NTI2 1148 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 GINM1Q9NU53 330 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 SERPINB13Q9UIV8 391 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 TAOK2Q9UL54 1235 aa16.14■□□□□ 0.17
CCDC130-202ENST00000540216 FAM196BA6NMK8 535 aa16.13■□□□□ 0.17
CCDC130-202ENST00000540216 CXCL11O14625 94 aa16.13■□□□□ 0.17
CCDC130-202ENST00000540216 RNF113AO15541 343 aaKnown RBP16.13■□□□□ 0.17
CCDC130-202ENST00000540216 B4GALNT3Q6L9W6 998 aa16.13■□□□□ 0.17
CCDC130-202ENST00000540216 DDRGK1Q96HY6 314 aa16.13■□□□□ 0.17
CCDC130-202ENST00000540216 DCP1AQ9NPI6 582 aaPredicted RBP16.13■□□□□ 0.17
CCDC130-202ENST00000540216 SLURP2P0DP57 97 aa16.12■□□□□ 0.17
CCDC130-202ENST00000540216 SLFNL1Q499Z3 407 aa16.12■□□□□ 0.17
CCDC130-202ENST00000540216 TICAM2Q86XR7 235 aa16.12■□□□□ 0.17
CCDC130-202ENST00000540216 EVI5LQ96CN4 794 aa16.12■□□□□ 0.17
CCDC130-202ENST00000540216 PTPN18Q99952 460 aa16.12■□□□□ 0.17
CCDC130-202ENST00000540216 FSD1Q9BTV5 496 aa16.12■□□□□ 0.17
CCDC130-202ENST00000540216 PUS7LQ9H0K6 701 aaKnown RBP16.12■□□□□ 0.17
CCDC130-202ENST00000540216 DNAJC18Q9H819 358 aa16.12■□□□□ 0.17
CCDC130-202ENST00000540216 ZHX2Q9Y6X8 837 aa16.12■□□□□ 0.17
CCDC130-202ENST00000540216 ATAD5Q96QE3 1844 aa16.11■□□□□ 0.17
CCDC130-202ENST00000540216 TBC1D8O95759 1140 aa16.11■□□□□ 0.17
CCDC130-202ENST00000540216 POLR3DP05423 398 aaPredicted RBP16.11■□□□□ 0.17
CCDC130-202ENST00000540216 ASNSP08243 561 aa16.11■□□□□ 0.17
CCDC130-202ENST00000540216 AMOTL1Q8IY63 956 aa16.11■□□□□ 0.17
CCDC130-202ENST00000540216 SDR42E1Q8WUS8 393 aa16.11■□□□□ 0.17
CCDC130-202ENST00000540216 MCM9Q9NXL9 1143 aa16.11■□□□□ 0.17
CCDC130-202ENST00000540216 AFG3L2Q9Y4W6 797 aa16.11■□□□□ 0.17
CCDC130-202ENST00000540216 GPR25O00155 361 aa16.1■□□□□ 0.17
CCDC130-202ENST00000540216 CHGBP05060 677 aa16.1■□□□□ 0.17
CCDC130-202ENST00000540216 SLC4A8Q2Y0W8 1093 aa16.1■□□□□ 0.17
CCDC130-202ENST00000540216 TNS4Q8IZW8 715 aa16.1■□□□□ 0.17
CCDC130-202ENST00000540216 OSBPL3Q9H4L5 887 aa16.1■□□□□ 0.17
CCDC130-202ENST00000540216 SLC4A4Q9Y6R1 1079 aa16.1■□□□□ 0.17
CCDC130-202ENST00000540216 PHIPQ8WWQ0 1821 aa16.1■□□□□ 0.17
CCDC130-202ENST00000540216 A0A0G2JLL6 359 aaPredicted RBP16.09■□□□□ 0.17
CCDC130-202ENST00000540216 USP17L5A8MUK1 530 aa16.09■□□□□ 0.17
CCDC130-202ENST00000540216 PRKAB2O43741 272 aa16.09■□□□□ 0.17
CCDC130-202ENST00000540216 GNAT2P19087 354 aa16.09■□□□□ 0.17
CCDC130-202ENST00000540216 RRP1BQ14684 758 aaKnown RBP16.09■□□□□ 0.17
CCDC130-202ENST00000540216 TATDN1Q6P1N9 297 aa16.09■□□□□ 0.17
CCDC130-202ENST00000540216 GIMAP6Q6P9H5 292 aa16.09■□□□□ 0.17
CCDC130-202ENST00000540216 FASTKD5Q7L8L6 764 aaKnown RBP16.09■□□□□ 0.17
CCDC130-202ENST00000540216 PRRT2Q7Z6L0 340 aaPredicted RBP16.09■□□□□ 0.17
CCDC130-202ENST00000540216 ANKRD23Q86SG2 305 aa16.09■□□□□ 0.17
CCDC130-202ENST00000540216 FAM43AQ8N2R8 423 aa16.09■□□□□ 0.17
CCDC130-202ENST00000540216 OSBP2Q969R2 916 aa16.09■□□□□ 0.17
CCDC130-202ENST00000540216 STRBPQ96SI9 672 aaKnown RBP16.09■□□□□ 0.17
CCDC130-202ENST00000540216 AS3MTQ9HBK9 375 aa16.09■□□□□ 0.17
CCDC130-202ENST00000540216 CASP8AP2Q9UKL3 1982 aa16.09■□□□□ 0.17
CCDC130-202ENST00000540216 BTBD19C9JJ37 291 aa16.08■□□□□ 0.16
CCDC130-202ENST00000540216 PLCD1P51178 756 aa16.08■□□□□ 0.16
CCDC130-202ENST00000540216 GABPAQ06546 454 aa16.08■□□□□ 0.16
CCDC130-202ENST00000540216 CRHR2Q13324 411 aa16.08■□□□□ 0.16
CCDC130-202ENST00000540216 TAF1CQ15572 869 aaPredicted RBP16.08■□□□□ 0.16
CCDC130-202ENST00000540216 PLEKHM2Q8IWE5 1019 aa16.08■□□□□ 0.16
CCDC130-202ENST00000540216 ZNF280CQ8ND82 737 aa16.08■□□□□ 0.16
CCDC130-202ENST00000540216 ZFYVE28Q9HCC9 887 aa16.08■□□□□ 0.16
CCDC130-202ENST00000540216 PTPRFP10586 1907 aa16.07■□□□□ 0.16
CCDC130-202ENST00000540216 GPAA1O43292 621 aa16.07■□□□□ 0.16
CCDC130-202ENST00000540216 FKTNO75072 461 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms