RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 VPS9D1Q9Y2B5 631 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 LTBP1Q14766 1721 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 SMARCA5O60264 1052 aaPredicted RBP8.99□□□□□ -0.97
CCDC60-204ENST00000539847 CELF2O95319 508 aaKnown RBP8.99□□□□□ -0.97
CCDC60-204ENST00000539847 F13A1P00488 732 aa8.99□□□□□ -0.97
CCDC60-204ENST00000539847 CDC25BP30305 580 aa8.99□□□□□ -0.97
CCDC60-204ENST00000539847 MTMR2Q13614 643 aa8.99□□□□□ -0.97
CCDC60-204ENST00000539847 CIAPIN1Q6FI81 312 aa8.99□□□□□ -0.97
CCDC60-204ENST00000539847 RBM43Q6ZSC3 357 aaKnown RBP8.99□□□□□ -0.97
CCDC60-204ENST00000539847 LRP10Q7Z4F1 713 aa8.99□□□□□ -0.97
CCDC60-204ENST00000539847 FAM200AQ8TCP9 573 aa8.99□□□□□ -0.97
CCDC60-204ENST00000539847 TSC1Q92574 1164 aa8.99□□□□□ -0.97
CCDC60-204ENST00000539847 DPF2Q92785 391 aa8.99□□□□□ -0.97
CCDC60-204ENST00000539847 SAGE1Q9NXZ1 904 aa8.99□□□□□ -0.97
CCDC60-204ENST00000539847 MORC2Q9Y6X9 1032 aaPredicted RBP8.99□□□□□ -0.97
CCDC60-204ENST00000539847 TRPM7Q96QT4 1865 aa8.99□□□□□ -0.97
CCDC60-204ENST00000539847 CFAP99D6REC4 459 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 TRAF5O00463 557 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 SGSM2O43147 1006 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 PDCP20941 246 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 SYT1P21579 422 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 GPTP24298 496 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 GMPSP49915 693 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-204ENST00000539847 AOC3Q16853 763 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 HSP90AB4PQ58FF6 505 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 VPS53Q5VIR6 699 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 RNF20Q5VTR2 975 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 DPP8Q6V1X1 898 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-204ENST00000539847 SSH3Q8TE77 659 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 LRRN4Q8WUT4 740 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 RUFY2Q8WXA3 655 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 SYMPKQ92797 1274 aaKnown RBP8.98□□□□□ -0.97
CCDC60-204ENST00000539847 TRIM34Q9BYJ4 488 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 TTC12Q9H892 705 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-204ENST00000539847 ANO2Q9NQ90 1003 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 SMC3Q9UQE7 1217 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 KDM3BQ7LBC6 1761 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 RAD50Q92878 1312 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 NUP98P52948 1817 aa8.98□□□□□ -0.97
CCDC60-204ENST00000539847 CCDC85CA6NKD9 419 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 C6orf229H3BNL8 230 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 H7C1D1 291 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 KIF2AO00139 706 aaPredicted RBP8.97□□□□□ -0.97
CCDC60-204ENST00000539847 GPR37L1O60883 481 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 CFHP08603 1231 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 HCLS1P14317 486 aaPredicted RBP8.97□□□□□ -0.97
CCDC60-204ENST00000539847 RPS12P25398 132 aaKnown RBP8.97□□□□□ -0.97
CCDC60-204ENST00000539847 ATP2B3Q16720 1220 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 SLFNL1Q499Z3 407 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 MPNDQ8N594 471 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 MCOLN1Q9GZU1 580 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 DDX19AQ9NUU7 478 aaKnown RBP8.97□□□□□ -0.97
CCDC60-204ENST00000539847 FAM53CQ9NYF3 392 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 MIS18AQ9NYP9 233 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 DDX41Q9UJV9 622 aaKnown RBP8.97□□□□□ -0.97
CCDC60-204ENST00000539847 PALD1Q9ULE6 856 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 IVNS1ABPQ9Y6Y0 642 aa8.97□□□□□ -0.97
CCDC60-204ENST00000539847 PALM3A6NDB9 673 aaPredicted RBP8.96□□□□□ -0.98
CCDC60-204ENST00000539847 AOC2O75106 756 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 RNF40O75150 1001 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 MYL6BP14649 208 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 CBX1P83916 185 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 FMR1Q06787 632 aaKnown RBP eCLIP8.96□□□□□ -0.98
CCDC60-204ENST00000539847 VAC14Q08AM6 782 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 GRAPQ13588 217 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 CCDC30Q5VVM6 783 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 DDX46Q7L014 1031 aaKnown RBP8.96□□□□□ -0.98
CCDC60-204ENST00000539847 SLF2Q8IX21 1173 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 TDRD7Q8NHU6 1098 aaKnown RBP8.96□□□□□ -0.98
CCDC60-204ENST00000539847 GRAPLQ8TC17 118 aaPredicted RBP8.96□□□□□ -0.98
CCDC60-204ENST00000539847 MARVELD3Q96A59 401 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 STK31Q9BXU1 1019 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 SCAND2PQ9GZW5 306 aaPredicted RBP8.96□□□□□ -0.98
CCDC60-204ENST00000539847 LSG1Q9H089 658 aaKnown RBP8.96□□□□□ -0.98
CCDC60-204ENST00000539847 CTNNA3Q9UI47 895 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 HDAC5Q9UQL6 1122 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 MTMR6Q9Y217 621 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 SNX14Q9Y5W7 946 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 TTC41PQ6P2S7 1318 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 SH3TC1Q8TE82 1336 aa8.96□□□□□ -0.98
CCDC60-204ENST00000539847 HIRAP54198 1017 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-204ENST00000539847 TCIRG1Q13488 830 aa8.95□□□□□ -0.98
CCDC60-204ENST00000539847 MAP3K11Q16584 847 aa8.95□□□□□ -0.98
CCDC60-204ENST00000539847 SARM1Q6SZW1 724 aa8.95□□□□□ -0.98
CCDC60-204ENST00000539847 SND1Q7KZF4 910 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC60-204ENST00000539847 NLRP10Q86W26 655 aa8.95□□□□□ -0.98
CCDC60-204ENST00000539847 PLA2G4DQ86XP0 818 aa8.95□□□□□ -0.98
CCDC60-204ENST00000539847 EPS8L1Q8TE68 723 aa8.95□□□□□ -0.98
CCDC60-204ENST00000539847 ZNF830Q96NB3 372 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-204ENST00000539847 GLIS2Q9BZE0 524 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-204ENST00000539847 KCNF1Q9H3M0 494 aa8.95□□□□□ -0.98
CCDC60-204ENST00000539847 ALG2Q9H553 416 aa8.95□□□□□ -0.98
CCDC60-204ENST00000539847 HYPKQ9NX55 129 aa8.95□□□□□ -0.98
CCDC60-204ENST00000539847 CNOT7Q9UIV1 285 aaKnown RBP8.95□□□□□ -0.98
CCDC60-204ENST00000539847 CNPY2Q9Y2B0 182 aa8.95□□□□□ -0.98
CCDC60-204ENST00000539847 CCDC66A2RUB6 948 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 CARNS1A5YM72 827 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 HIP1O00291 1037 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 CTAGE5O15320 804 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 HOXB7P09629 217 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms