RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 COL2A1P02458 1487 aaPredicted RBP15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 FLT1P17948 1338 aa15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 A0A0G2JLL6 359 aaPredicted RBP15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 IFIT2P09913 472 aaKnown RBP15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 CYP2C8P10632 490 aa15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 PPP4CP60510 307 aa15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 LACTBP83111 547 aaPredicted RBP15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 GPAT2Q6NUI2 795 aa15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 FASTKD5Q7L8L6 764 aaKnown RBP15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 PRRT2Q7Z6L0 340 aaPredicted RBP15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 CLASRPQ8N2M8 674 aaKnown RBP15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 KIF1BPQ96EK5 621 aa15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 PTCH2Q9Y6C5 1203 aa15.54■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 MAP3K12Q12852 859 aa15.53■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 C17orf99Q6UX52 265 aa15.53■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 CRACR2BQ8N4Y2 399 aaPredicted RBP15.53■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 PARK7Q99497 189 aaKnown RBP15.53■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 TRIM34Q9BYJ4 488 aa15.53■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 DHX36Q9H2U1 1008 aaKnown RBP15.53■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 PI4KBQ9UBF8 816 aa15.53■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 PALD1Q9ULE6 856 aa15.53■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 ADGRA2Q96PE1 1338 aa15.52■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 MYCP01106 439 aaPredicted RBP15.52■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 USP5P45974 858 aa15.52■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 RRP1BQ14684 758 aaKnown RBP15.52■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 SLC9C1Q4G0N8 1177 aa15.52■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 DNAJC2Q99543 621 aaKnown RBP15.52■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 HERC5Q9UII4 1024 aaKnown RBP15.52■□□□□ 0.08
TSPAN9-IT1-201ENST00000539784 CDK5RAP2Q96SN8 1893 aa15.51■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 POTEFA5A3E0 1075 aa15.51■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 RAB11FIP3O75154 756 aa15.51■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 FMNL1O95466 1100 aaPredicted RBP15.51■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 CAP2P40123 477 aa15.51■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 PSMC4P43686 418 aa15.51■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 SPP2Q13103 211 aa15.51■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 PDE3AQ14432 1141 aa15.51■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 PHIPQ8WWQ0 1821 aa15.51■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 SIPA1L1O43166 1804 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 ATAD5Q96QE3 1844 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 GOLIM4O00461 696 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 IGSF3O75054 1194 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 GDF11O95390 407 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 HLA-DOAP06340 250 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 CTGFP29279 349 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 ZNF280CQ8ND82 737 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 SMCR8Q8TEV9 937 aaPredicted RBP15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 ARMC5Q96C12 935 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 TRIM47Q96LD4 638 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 FOCADQ5VW36 1801 aa15.5■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 USP17L5A8MUK1 530 aa15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 HMGCS2P54868 508 aa15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 TTF1Q15361 905 aaPredicted RBP15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 SHROOM1Q2M3G4 852 aaPredicted RBP15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 TREML2Q5T2D2 321 aa15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 NBPF11Q86T75 865 aa15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 SH3TC2Q8TF17 1288 aa15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 EDC3Q96F86 508 aaKnown RBP15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 DNAJC18Q9H819 358 aa15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 AGTPBP1Q9UPW5 1226 aa15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 PTPRFP10586 1907 aa15.49■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 GNRH1P01148 92 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 BCRP11274 1271 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 PDE6AP16499 860 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 OSBPP22059 807 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 JAG1P78504 1218 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 SLC9C2Q5TAH2 1124 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 CERS3Q8IU89 383 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 FOXP4Q8IVH2 680 aaPredicted RBP15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 ZNF333Q96JL9 665 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 BOLA2Q9H3K6 86 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 AS3MTQ9HBK9 375 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 SLC45A1Q9Y2W3 748 aa15.48■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 MAGEB6P1A0A0J9YX57 407 aa15.47■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 SMARCA5O60264 1052 aaPredicted RBP15.47■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 HOXD10P28358 340 aa15.47■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 RAET1EQ8TD07 263 aa15.47■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 TMEM106CQ9BVX2 250 aa15.47■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 TBC1D2Q9BYX2 928 aa15.47■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 SRRDQ9UH36 339 aa15.47■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 MYPNQ86TC9 1320 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 ZNF532Q9HCE3 1301 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 HTTP42858 3142 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 ASNSP08243 561 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 EN2P19622 333 aaPredicted RBP15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 PRMT2P55345 433 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 FCGRTP55899 365 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 MTMR2Q13614 643 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 ANKRD13CQ8N6S4 541 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 PROCA1Q8NCQ7 364 aaPredicted RBP15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 RIOK1Q9BRS2 568 aaKnown RBP15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 LRRCC1Q9C099 1032 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 PNMA3Q9UL41 463 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 MYH1P12882 1939 aa15.46■□□□□ 0.07
TSPAN9-IT1-201ENST00000539784 PRKCZQ05513 592 aa15.45■□□□□ 0.06
TSPAN9-IT1-201ENST00000539784 METTL16Q86W50 562 aaKnown RBP15.45■□□□□ 0.06
TSPAN9-IT1-201ENST00000539784 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
TSPAN9-IT1-201ENST00000539784 PAG1Q9NWQ8 432 aa15.45■□□□□ 0.06
TSPAN9-IT1-201ENST00000539784 TMOD4Q9NZQ9 345 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms