RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 TRIOBPQ9H2D6 2365 aa8.88□□□□□ -0.99
LDHB-208ENST00000539782 BRCA2P51587 3418 aa8.88□□□□□ -0.99
LDHB-208ENST00000539782 MYH2Q9UKX2 1941 aa8.88□□□□□ -0.99
LDHB-208ENST00000539782 GPR75-ASB3A0A0A6YYF3 556 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 SRGAP3O43295 1099 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 MAP4K4O95819 1239 aaPredicted RBP8.87□□□□□ -0.99
LDHB-208ENST00000539782 GNAI3P08754 354 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 CT47B1P0C2W7 299 aaPredicted RBP8.87□□□□□ -0.99
LDHB-208ENST00000539782 SLURP2P0DP57 97 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 HMGCS2P54868 508 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 IRX3P78415 501 aaPredicted RBP8.87□□□□□ -0.99
LDHB-208ENST00000539782 MAP3K10Q02779 954 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 TFCP2Q12800 502 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 SPP2Q13103 211 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 CCAR1Q8IX12 1150 aaKnown RBP8.87□□□□□ -0.99
LDHB-208ENST00000539782 TEX11Q8IYF3 940 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 C7orf61Q8IZ16 206 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 ANKLE1Q8NAG6 615 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 ZNF280CQ8ND82 737 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 SLC17A8Q8NDX2 589 aa8.87□□□□□ -0.99
LDHB-208ENST00000539782 PAWRQ96IZ0 340 aaKnown RBP8.87□□□□□ -0.99
LDHB-208ENST00000539782 CWC22Q9HCG8 908 aaKnown RBP8.87□□□□□ -0.99
LDHB-208ENST00000539782 PAK6Q9NQU5 681 aaPredicted RBP8.87□□□□□ -0.99
LDHB-208ENST00000539782 USP17L5A8MUK1 530 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 ZBTB22O15209 634 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 TBC1D12O60347 775 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 PDE3AQ14432 1141 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 SPATA5Q8NB90 893 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 MEIS3Q99687 375 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 NBPF3Q9H094 633 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 PRO3102Q9H379 93 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 HMX1Q9NP08 348 aaPredicted RBP8.86□□□□□ -0.99
LDHB-208ENST00000539782 TMOD4Q9NZQ9 345 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 LRP2BPQ9P2M1 347 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 STAP2Q9UGK3 403 aa8.86□□□□□ -0.99
LDHB-208ENST00000539782 RPTORQ8N122 1335 aa8.85□□□□□ -0.99
LDHB-208ENST00000539782 COL2A1P02458 1487 aaPredicted RBP8.85□□□□□ -0.99
LDHB-208ENST00000539782 BAG3O95817 575 aa8.85□□□□□ -0.99
LDHB-208ENST00000539782 UQCRFS1P1P0C7P4 283 aa8.85□□□□□ -0.99
LDHB-208ENST00000539782 RHBDL3P58872 404 aa8.85□□□□□ -0.99
LDHB-208ENST00000539782 G3BP1Q13283 466 aaKnown RBP eCLIP8.85□□□□□ -0.99
LDHB-208ENST00000539782 CRACR2BQ8N4Y2 399 aaPredicted RBP8.85□□□□□ -0.99
LDHB-208ENST00000539782 DIS3LQ8TF46 1054 aaKnown RBP8.85□□□□□ -0.99
LDHB-208ENST00000539782 CDCA7LQ96GN5 454 aa8.85□□□□□ -0.99
LDHB-208ENST00000539782 CRISPLD2Q9H0B8 497 aa8.85□□□□□ -0.99
LDHB-208ENST00000539782 ASCC2Q9H1I8 757 aaPredicted RBP8.85□□□□□ -0.99
LDHB-208ENST00000539782 C11orf49Q9H6J7 331 aa8.85□□□□□ -0.99
LDHB-208ENST00000539782 HMG20BQ9P0W2 317 aa8.85□□□□□ -0.99
LDHB-208ENST00000539782 HERC5Q9UII4 1024 aaKnown RBP8.85□□□□□ -0.99
LDHB-208ENST00000539782 ZMYND8Q9ULU4 1186 aaPredicted RBP8.85□□□□□ -0.99
LDHB-208ENST00000539782 ASNSP08243 561 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 PLCG2P16885 1265 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 ZKSCAN1P17029 563 aaPredicted RBP8.84□□□□□ -0.99
LDHB-208ENST00000539782 CYP2B6P20813 491 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 CAP2P40123 477 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 OS9Q13438 667 aaPredicted RBP8.84□□□□□ -0.99
LDHB-208ENST00000539782 MTMR2Q13614 643 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 TTC39AQ5SRH9 613 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 NAA16Q6N069 864 aaPredicted RBP8.84□□□□□ -0.99
LDHB-208ENST00000539782 PI16Q6UXB8 463 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 TBC1D9Q6ZT07 1266 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 SOCS4Q8WXH5 440 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 NSUN4Q96CB9 384 aaKnown RBP8.84□□□□□ -0.99
LDHB-208ENST00000539782 LRCH3Q96II8 777 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 NUDT12Q9BQG2 462 aa8.84□□□□□ -0.99
LDHB-208ENST00000539782 DHX36Q9H2U1 1008 aaKnown RBP8.84□□□□□ -0.99
LDHB-208ENST00000539782 PTPRFP10586 1907 aa8.84□□□□□ -1
LDHB-208ENST00000539782 LOC285556D6RIA3 1793 aa8.84□□□□□ -1
LDHB-208ENST00000539782 PHIPQ8WWQ0 1821 aa8.83□□□□□ -1
LDHB-208ENST00000539782 DLL1O00548 723 aa8.83□□□□□ -1
LDHB-208ENST00000539782 SOX1O00570 391 aaPredicted RBP8.83□□□□□ -1
LDHB-208ENST00000539782 GNAI2P04899 355 aa8.83□□□□□ -1
LDHB-208ENST00000539782 HLA-DOAP06340 250 aa8.83□□□□□ -1
LDHB-208ENST00000539782 PRKAR2AP13861 404 aaKnown RBP8.83□□□□□ -1
LDHB-208ENST00000539782 ARID4AP29374 1257 aaPredicted RBP8.83□□□□□ -1
LDHB-208ENST00000539782 TRIM32Q13049 653 aa8.83□□□□□ -1
LDHB-208ENST00000539782 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
LDHB-208ENST00000539782 ATF7IPQ6VMQ6 1270 aa8.83□□□□□ -1
LDHB-208ENST00000539782 MAPKAPK5Q8IW41 473 aa8.83□□□□□ -1
LDHB-208ENST00000539782 TRMT44Q8IYL2 757 aaKnown RBP8.83□□□□□ -1
LDHB-208ENST00000539782 GPRC5AQ8NFJ5 357 aa8.83□□□□□ -1
LDHB-208ENST00000539782 SH3RF3Q8TEJ3 882 aaPredicted RBP8.83□□□□□ -1
LDHB-208ENST00000539782 GTF3C2Q8WUA4 911 aaPredicted RBP8.83□□□□□ -1
LDHB-208ENST00000539782 WDR18Q9BV38 432 aa8.83□□□□□ -1
LDHB-208ENST00000539782 AATFQ9NY61 560 aaKnown RBP eCLIP8.83□□□□□ -1
LDHB-208ENST00000539782 PI4KBQ9UBF8 816 aa8.83□□□□□ -1
LDHB-208ENST00000539782 MORF4L1Q9UBU8 362 aa8.83□□□□□ -1
LDHB-208ENST00000539782 C19orf81C9J6K1 198 aa8.82□□□□□ -1
LDHB-208ENST00000539782 USP17L10C9JJH3 530 aa8.82□□□□□ -1
LDHB-208ENST00000539782 IPO8O15397 1037 aaKnown RBP8.82□□□□□ -1
LDHB-208ENST00000539782 GDF11O95390 407 aa8.82□□□□□ -1
LDHB-208ENST00000539782 SYN1P17600 705 aa8.82□□□□□ -1
LDHB-208ENST00000539782 MAPK4P31152 587 aa8.82□□□□□ -1
LDHB-208ENST00000539782 RGS2P41220 211 aa8.82□□□□□ -1
LDHB-208ENST00000539782 BACE1P56817 501 aa8.82□□□□□ -1
LDHB-208ENST00000539782 HERVK_113P62684 666 aa8.82□□□□□ -1
LDHB-208ENST00000539782 MTX1Q13505 466 aa8.82□□□□□ -1
LDHB-208ENST00000539782 CCDC158Q5M9N0 1113 aa8.82□□□□□ -1
LDHB-208ENST00000539782 ZNF384Q8TF68 577 aa8.82□□□□□ -1
LDHB-208ENST00000539782 TGFBRAP1Q8WUH2 860 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms