RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 FXR1P51114 621 aaKnown RBP eCLIP13.4□□□□□ -0.263e-6■■■□□ 14.7
DDB1-214ENST00000539426 POLA2Q14181 598 aa13.4□□□□□ -0.26
DDB1-214ENST00000539426 UBE2Q1Q7Z7E8 422 aa13.4□□□□□ -0.26
DDB1-214ENST00000539426 SMCR8Q8TEV9 937 aaPredicted RBP13.4□□□□□ -0.26
DDB1-214ENST00000539426 SNRKQ9NRH2 765 aa13.4□□□□□ -0.26
DDB1-214ENST00000539426 BIN2Q9UBW5 565 aaPredicted RBP13.4□□□□□ -0.26
DDB1-214ENST00000539426 COLQQ9Y215 455 aaPredicted RBP13.4□□□□□ -0.26
DDB1-214ENST00000539426 MAP4K4O95819 1239 aaPredicted RBP13.39□□□□□ -0.27
DDB1-214ENST00000539426 UQCRFS1P1P0C7P4 283 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 ELNP15502 786 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 GJA8P48165 433 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 FLT3LGP49771 235 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 UBXN2AP68543 259 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 TEX11Q8IYF3 940 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 ANKRD13CQ8N6S4 541 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 SLAIN1Q8ND83 568 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 SH3RF3Q8TEJ3 882 aaPredicted RBP13.39□□□□□ -0.27
DDB1-214ENST00000539426 DBNDD2Q9BQY9 259 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 UNC93B1Q9H1C4 597 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 C1orf115Q9H7X2 142 aa13.39□□□□□ -0.27
DDB1-214ENST00000539426 ADCY3O60266 1144 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 CAP2P40123 477 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 HMGCS2P54868 508 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 SPP2Q13103 211 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 TNNI3KQ59H18 835 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 ZKSCAN2Q63HK3 967 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 ADGRA1Q86SQ6 560 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 PROCA1Q8NCQ7 364 aaPredicted RBP13.38□□□□□ -0.27
DDB1-214ENST00000539426 ZNF280CQ8ND82 737 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 NKX2-3Q8TAU0 364 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 SSH3Q8TE77 659 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 AATFQ9NY61 560 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDB1-214ENST00000539426 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 FPGT-TNNI3KV9GXZ4 949 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 ALPK3Q96L96 1907 aa13.38□□□□□ -0.27
DDB1-214ENST00000539426 PLXNB2O15031 1838 aa13.37□□□□□ -0.27
DDB1-214ENST00000539426 TNPO2O14787 897 aaKnown RBP13.37□□□□□ -0.27
DDB1-214ENST00000539426 INHAP05111 366 aa13.37□□□□□ -0.27
DDB1-214ENST00000539426 CYP2E1P05181 493 aaPredicted RBP13.37□□□□□ -0.27
DDB1-214ENST00000539426 FAM110CQ1W6H9 321 aa13.37□□□□□ -0.27
DDB1-214ENST00000539426 TTC39AQ5SRH9 613 aa13.37□□□□□ -0.27
DDB1-214ENST00000539426 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
DDB1-214ENST00000539426 U2AF1L4Q8WU68 220 aaKnown RBP13.37□□□□□ -0.27
DDB1-214ENST00000539426 DNAJC18Q9H819 358 aa13.37□□□□□ -0.27
DDB1-214ENST00000539426 GPR108Q9NPR9 543 aa13.37□□□□□ -0.27
DDB1-214ENST00000539426 MYH1P12882 1939 aa13.37□□□□□ -0.27
DDB1-214ENST00000539426 RLBP1P12271 317 aa13.36□□□□□ -0.27
DDB1-214ENST00000539426 JAG1P78504 1218 aa13.36□□□□□ -0.27
DDB1-214ENST00000539426 ATP8B2P98198 1209 aa13.36□□□□□ -0.27
DDB1-214ENST00000539426 IRF5Q13568 498 aa13.36□□□□□ -0.27
DDB1-214ENST00000539426 SHROOM1Q2M3G4 852 aaPredicted RBP13.36□□□□□ -0.27
DDB1-214ENST00000539426 PXYLP1Q8TE99 480 aa13.36□□□□□ -0.27
DDB1-214ENST00000539426 TGFBRAP1Q8WUH2 860 aa13.36□□□□□ -0.27
DDB1-214ENST00000539426 DPF3Q92784 378 aa13.36□□□□□ -0.27
DDB1-214ENST00000539426 HERC5Q9UII4 1024 aaKnown RBP13.36□□□□□ -0.27
DDB1-214ENST00000539426 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
DDB1-214ENST00000539426 FLT1P17948 1338 aa13.36□□□□□ -0.27
DDB1-214ENST00000539426 USP17L5A8MUK1 530 aa13.35□□□□□ -0.27
DDB1-214ENST00000539426 SURF6O75683 361 aaKnown RBP13.35□□□□□ -0.27
DDB1-214ENST00000539426 FARP2O94887 1054 aaPredicted RBP13.35□□□□□ -0.27
DDB1-214ENST00000539426 SGPL1O95470 568 aa13.35□□□□□ -0.27
DDB1-214ENST00000539426 ZAP70P43403 619 aa13.35□□□□□ -0.27
DDB1-214ENST00000539426 PPP4CP60510 307 aa13.35□□□□□ -0.27
DDB1-214ENST00000539426 OS9Q13438 667 aaPredicted RBP13.35□□□□□ -0.27
DDB1-214ENST00000539426 SH3D19Q5HYK7 790 aa13.35□□□□□ -0.27
DDB1-214ENST00000539426 CHRDL2Q6WN34 429 aa13.35□□□□□ -0.27
DDB1-214ENST00000539426 MAPKAPK5Q8IW41 473 aa13.35□□□□□ -0.27
DDB1-214ENST00000539426 ASCC2Q9H1I8 757 aaPredicted RBP13.35□□□□□ -0.27
DDB1-214ENST00000539426 PIH1D3Q9NQM4 214 aaKnown RBP13.35□□□□□ -0.27
DDB1-214ENST00000539426 TLR7Q9NYK1 1049 aaKnown RBP13.35□□□□□ -0.27
DDB1-214ENST00000539426 PI4KBQ9UBF8 816 aa13.35□□□□□ -0.27
DDB1-214ENST00000539426 DBNLQ9UJU6 430 aaKnown RBP13.35□□□□□ -0.27
DDB1-214ENST00000539426 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
DDB1-214ENST00000539426 LAMA3Q16787 3333 aa13.34□□□□□ -0.27
DDB1-214ENST00000539426 PEX10O60683 326 aa13.34□□□□□ -0.27
DDB1-214ENST00000539426 PLCG2P16885 1265 aa13.34□□□□□ -0.27
DDB1-214ENST00000539426 MTMR2Q13614 643 aa13.34□□□□□ -0.27
DDB1-214ENST00000539426 CCDC158Q5M9N0 1113 aa13.34□□□□□ -0.27
DDB1-214ENST00000539426 COA7Q96BR5 231 aa13.34□□□□□ -0.27
DDB1-214ENST00000539426 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
DDB1-214ENST00000539426 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
DDB1-214ENST00000539426 DHX36Q9H2U1 1008 aaKnown RBP13.34□□□□□ -0.27
DDB1-214ENST00000539426 PAK6Q9NQU5 681 aaPredicted RBP13.34□□□□□ -0.27
DDB1-214ENST00000539426 PALD1Q9ULE6 856 aa13.34□□□□□ -0.27
DDB1-214ENST00000539426 NOP58Q9Y2X3 529 aaKnown RBP13.34□□□□□ -0.27
DDB1-214ENST00000539426 GDF11O95390 407 aa13.33□□□□□ -0.28
DDB1-214ENST00000539426 BAG3O95817 575 aa13.33□□□□□ -0.28
DDB1-214ENST00000539426 GCLCP48506 637 aaPredicted RBP13.33□□□□□ -0.28
DDB1-214ENST00000539426 DYNLL1P63167 89 aaKnown RBP13.33□□□□□ -0.28
DDB1-214ENST00000539426 METTL16Q86W50 562 aaKnown RBP13.33□□□□□ -0.28
DDB1-214ENST00000539426 ITPRIPQ8IWB1 547 aa13.33□□□□□ -0.28
DDB1-214ENST00000539426 ZNF512BQ96KM6 892 aaPredicted RBP13.33□□□□□ -0.28
DDB1-214ENST00000539426 DEFB118Q96PH6 123 aa13.33□□□□□ -0.28
DDB1-214ENST00000539426 WDR18Q9BV38 432 aa13.33□□□□□ -0.28
DDB1-214ENST00000539426 CCDC8Q9H0W5 538 aaPredicted RBP13.33□□□□□ -0.28
DDB1-214ENST00000539426 AS3MTQ9HBK9 375 aa13.33□□□□□ -0.28
DDB1-214ENST00000539426 RBM27Q9P2N5 1060 aaKnown RBP13.33□□□□□ -0.28
DDB1-214ENST00000539426 SAP30BPQ9UHR5 308 aaKnown RBP13.33□□□□□ -0.28
DDB1-214ENST00000539426 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms