RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 FKTNO75072 461 aa19■□□□□ 0.63
CIT-210ENST00000539413 PTPRAP18433 802 aa19■□□□□ 0.63
CIT-210ENST00000539413 USP5P45974 858 aa19■□□□□ 0.63
CIT-210ENST00000539413 CERS3Q8IU89 383 aa19■□□□□ 0.63
CIT-210ENST00000539413 ZHX2Q9Y6X8 837 aa19■□□□□ 0.63
CIT-210ENST00000539413 DOCK1Q14185 1865 aa19■□□□□ 0.63
CIT-210ENST00000539413 MAGEB6P1A0A0J9YX57 407 aa18.99■□□□□ 0.63
CIT-210ENST00000539413 BTBD19C9JJ37 291 aa18.99■□□□□ 0.63
CIT-210ENST00000539413 RRP1BQ14684 758 aaKnown RBP18.99■□□□□ 0.63
CIT-210ENST00000539413 TAF1CQ15572 869 aaPredicted RBP18.99■□□□□ 0.63
CIT-210ENST00000539413 SLC4A8Q2Y0W8 1093 aa18.99■□□□□ 0.63
CIT-210ENST00000539413 SLFNL1Q499Z3 407 aa18.99■□□□□ 0.63
CIT-210ENST00000539413 TSHZ3Q63HK5 1081 aa18.99■□□□□ 0.63
CIT-210ENST00000539413 CTU1Q7Z7A3 348 aaKnown RBP18.99■□□□□ 0.63
CIT-210ENST00000539413 CCDC84Q86UT8 332 aaPredicted RBP18.99■□□□□ 0.63
CIT-210ENST00000539413 HERC5Q9UII4 1024 aaKnown RBP18.99■□□□□ 0.63
CIT-210ENST00000539413 CHGBP05060 677 aa18.98■□□□□ 0.63
CIT-210ENST00000539413 DNAJC18Q9H819 358 aa18.98■□□□□ 0.63
CIT-210ENST00000539413 CXCL11O14625 94 aa18.97■□□□□ 0.63
CIT-210ENST00000539413 ADD2P35612 726 aa18.97■□□□□ 0.63
CIT-210ENST00000539413 MOGSQ13724 837 aa18.97■□□□□ 0.63
CIT-210ENST00000539413 METTL16Q86W50 562 aaKnown RBP18.97■□□□□ 0.63
CIT-210ENST00000539413 CRACR2BQ8N4Y2 399 aaPredicted RBP18.97■□□□□ 0.63
CIT-210ENST00000539413 GPATCH3Q96I76 525 aa18.97■□□□□ 0.63
CIT-210ENST00000539413 ZFYVE28Q9HCC9 887 aa18.97■□□□□ 0.63
CIT-210ENST00000539413 AFG3L2Q9Y4W6 797 aa18.97■□□□□ 0.63
CIT-210ENST00000539413 HLA-DOAP06340 250 aa18.96■□□□□ 0.63
CIT-210ENST00000539413 CAP2P40123 477 aa18.96■□□□□ 0.63
CIT-210ENST00000539413 FOXP4Q8IVH2 680 aaPredicted RBP18.96■□□□□ 0.63
CIT-210ENST00000539413 LCORLQ8N3X6 602 aa18.96■□□□□ 0.63
CIT-210ENST00000539413 OTUD7AQ8TE49 926 aaPredicted RBP18.96■□□□□ 0.63
CIT-210ENST00000539413 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.96■□□□□ 0.631e-6■■□□□ 12
CIT-210ENST00000539413 ZCCHC17Q9NP64 241 aaKnown RBP18.96■□□□□ 0.63
CIT-210ENST00000539413 SUPT16HQ9Y5B9 1047 aaKnown RBP18.96■□□□□ 0.63
CIT-210ENST00000539413 HDAC1Q13547 482 aaPredicted RBP18.95■□□□□ 0.62
CIT-210ENST00000539413 ANKRD23Q86SG2 305 aa18.95■□□□□ 0.62
CIT-210ENST00000539413 EXOC6Q8TAG9 804 aa18.95■□□□□ 0.62
CIT-210ENST00000539413 CRNKL1Q9BZJ0 848 aaKnown RBP18.95■□□□□ 0.62
CIT-210ENST00000539413 ARMT1Q9H993 441 aa18.95■□□□□ 0.62
CIT-210ENST00000539413 PHIPQ8WWQ0 1821 aa18.95■□□□□ 0.62
CIT-210ENST00000539413 DDX60LQ5H9U9 1706 aaKnown RBP18.94■□□□□ 0.62
CIT-210ENST00000539413 A0A0G2JLL6 359 aaPredicted RBP18.94■□□□□ 0.62
CIT-210ENST00000539413 TRIM75PA6NK02 468 aa18.94■□□□□ 0.62
CIT-210ENST00000539413 PDHXO00330 501 aa18.94■□□□□ 0.62
CIT-210ENST00000539413 JAG1P78504 1218 aa18.94■□□□□ 0.62
CIT-210ENST00000539413 AAMPQ13685 434 aa18.94■□□□□ 0.62
CIT-210ENST00000539413 GPAT2Q6NUI2 795 aa18.94■□□□□ 0.62
CIT-210ENST00000539413 PRRT2Q7Z6L0 340 aaPredicted RBP18.94■□□□□ 0.62
CIT-210ENST00000539413 SDR42E1Q8WUS8 393 aa18.94■□□□□ 0.62
CIT-210ENST00000539413 TRIM34Q9BYJ4 488 aa18.94■□□□□ 0.62
CIT-210ENST00000539413 ATAD5Q96QE3 1844 aa18.94■□□□□ 0.62
CIT-210ENST00000539413 CCDC85CA6NKD9 419 aa18.93■□□□□ 0.62
CIT-210ENST00000539413 MBD4O95243 580 aa18.93■□□□□ 0.62
CIT-210ENST00000539413 SP3Q02447 781 aa18.93■□□□□ 0.62
CIT-210ENST00000539413 UBE3CQ15386 1083 aa18.93■□□□□ 0.62
CIT-210ENST00000539413 SHROOM1Q2M3G4 852 aaPredicted RBP18.93■□□□□ 0.62
CIT-210ENST00000539413 ANKRD45Q5TZF3 282 aa18.93■□□□□ 0.62
CIT-210ENST00000539413 CD99L2Q8TCZ2 262 aa18.93■□□□□ 0.62
CIT-210ENST00000539413 GCC1Q96CN9 775 aa18.93■□□□□ 0.62
CIT-210ENST00000539413 MYH1P12882 1939 aa18.93■□□□□ 0.62
CIT-210ENST00000539413 TTC41PQ6P2S7 1318 aa18.93■□□□□ 0.62
CIT-210ENST00000539413 NAV1Q8NEY1 1877 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 TLR2O60603 784 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 GDF11O95390 407 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 PLCD1P51178 756 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 CAP1Q01518 475 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 ZSCAN25Q6NSZ9 544 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 GADL1Q6ZQY3 521 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 FASTKD5Q7L8L6 764 aaKnown RBP18.92■□□□□ 0.62
CIT-210ENST00000539413 TTC6Q86TZ1 520 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 KBTBD3Q8NAB2 608 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 PI4K2BQ8TCG2 481 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 ERO1AQ96HE7 468 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 SERPINB13Q9UIV8 391 aa18.92■□□□□ 0.62
CIT-210ENST00000539413 USP17L5A8MUK1 530 aa18.91■□□□□ 0.62
CIT-210ENST00000539413 PRKAB2O43741 272 aa18.91■□□□□ 0.62
CIT-210ENST00000539413 EVX2Q03828 476 aa18.91■□□□□ 0.62
CIT-210ENST00000539413 SPP2Q13103 211 aa18.91■□□□□ 0.62
CIT-210ENST00000539413 PKN2Q16513 984 aaKnown RBP18.91■□□□□ 0.62
CIT-210ENST00000539413 ZNF280CQ8ND82 737 aa18.91■□□□□ 0.62
CIT-210ENST00000539413 EHD4Q9H223 541 aa18.91■□□□□ 0.62
CIT-210ENST00000539413 DCP1AQ9NPI6 582 aaPredicted RBP18.91■□□□□ 0.62
CIT-210ENST00000539413 TRIM17Q9Y577 477 aa18.91■□□□□ 0.62
CIT-210ENST00000539413 SALL3Q9BXA9 1300 aa18.91■□□□□ 0.62
CIT-210ENST00000539413 MYH7P12883 1935 aa18.9■□□□□ 0.62
CIT-210ENST00000539413 POLR3DP05423 398 aaPredicted RBP18.9■□□□□ 0.62
CIT-210ENST00000539413 ASNSP08243 561 aa18.9■□□□□ 0.62
CIT-210ENST00000539413 MX1P20591 662 aa18.9■□□□□ 0.62
CIT-210ENST00000539413 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
CIT-210ENST00000539413 OTOP1Q7RTM1 612 aa18.9■□□□□ 0.62
CIT-210ENST00000539413 TBC1D2Q9BYX2 928 aa18.9■□□□□ 0.62
CIT-210ENST00000539413 PUS7LQ9H0K6 701 aaKnown RBP18.9■□□□□ 0.62
CIT-210ENST00000539413 MCM9Q9NXL9 1143 aa18.9■□□□□ 0.62
CIT-210ENST00000539413 ZBTB47Q9UFB7 747 aaPredicted RBP18.9■□□□□ 0.62
CIT-210ENST00000539413 CPA4Q9UI42 421 aa18.9■□□□□ 0.62
CIT-210ENST00000539413 ERC2O15083 957 aa18.89■□□□□ 0.61
CIT-210ENST00000539413 GLRX3O76003 335 aaKnown RBP18.89■□□□□ 0.61
CIT-210ENST00000539413 CYP2C8P10632 490 aa18.89■□□□□ 0.61
CIT-210ENST00000539413 FBXO46Q6PJ61 603 aaPredicted RBP18.89■□□□□ 0.61
CIT-210ENST00000539413 AS3MTQ9HBK9 375 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms