RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 TNFRSF10AO00220 468 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 EVI5O60447 810 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 CRHR2Q13324 411 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 TNFAIP1Q13829 316 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 CCDC158Q5M9N0 1113 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 OTUD7BQ6GQQ9 843 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 MIGA1Q8NAN2 632 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 BRI3BPQ8WY22 251 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 OPTNQ96CV9 577 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 WRNIP1Q96S55 665 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 GDF15Q99988 308 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 IDI2Q9BXS1 227 aa8.85□□□□□ -0.99
LMO3-220ENST00000539232 NCOR1O75376 2440 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 PPP1R12BO60237 982 aaPredicted RBP8.84□□□□□ -0.99
LMO3-220ENST00000539232 IDH1O75874 414 aaKnown RBP8.84□□□□□ -0.99
LMO3-220ENST00000539232 ZBTB48P10074 688 aaPredicted RBP8.84□□□□□ -0.99
LMO3-220ENST00000539232 CYP7A1P22680 504 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 IREB2P48200 963 aaKnown RBP8.84□□□□□ -0.99
LMO3-220ENST00000539232 TNNI2P48788 182 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 SPTY2D1Q68D10 685 aaPredicted RBP8.84□□□□□ -0.99
LMO3-220ENST00000539232 FAM109BQ6ICB4 259 aaPredicted RBP8.84□□□□□ -0.99
LMO3-220ENST00000539232 NAA16Q6N069 864 aaPredicted RBP8.84□□□□□ -0.99
LMO3-220ENST00000539232 ERC1Q8IUD2 1116 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 ANKRD13AQ8IZ07 590 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 SH3TC2Q8TF17 1288 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 KIF1BPQ96EK5 621 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 BOLA2Q9H3K6 86 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 DCTPP1Q9H773 170 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 AATFQ9NY61 560 aaKnown RBP eCLIP8.84□□□□□ -0.99
LMO3-220ENST00000539232 TMOD2Q9NZR1 351 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 ZNF112Q9UJU3 913 aa8.84□□□□□ -0.99
LMO3-220ENST00000539232 RBM19Q9Y4C8 960 aaKnown RBP8.84□□□□□ -0.99
LMO3-220ENST00000539232 PRUNE2Q8WUY3 3088 aa8.83□□□□□ -1
LMO3-220ENST00000539232 TMEM265A0A087WTH1 108 aa8.83□□□□□ -1
LMO3-220ENST00000539232 GOLIM4O00461 696 aa8.83□□□□□ -1
LMO3-220ENST00000539232 IRF6O14896 467 aa8.83□□□□□ -1
LMO3-220ENST00000539232 HMMRO75330 724 aa8.83□□□□□ -1
LMO3-220ENST00000539232 ENTPD3O75355 529 aa8.83□□□□□ -1
LMO3-220ENST00000539232 GJA8P48165 433 aa8.83□□□□□ -1
LMO3-220ENST00000539232 IRX6P78412 446 aaPredicted RBP8.83□□□□□ -1
LMO3-220ENST00000539232 MAP3K12Q12852 859 aa8.83□□□□□ -1
LMO3-220ENST00000539232 MOGSQ13724 837 aa8.83□□□□□ -1
LMO3-220ENST00000539232 MAPKAPK5Q8IW41 473 aa8.83□□□□□ -1
LMO3-220ENST00000539232 TEX11Q8IYF3 940 aa8.83□□□□□ -1
LMO3-220ENST00000539232 FAM43AQ8N2R8 423 aa8.83□□□□□ -1
LMO3-220ENST00000539232 ZGPATQ8N5A5 531 aaKnown RBP8.83□□□□□ -1
LMO3-220ENST00000539232 MAGEB6Q8N7X4 407 aa8.83□□□□□ -1
LMO3-220ENST00000539232 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.83□□□□□ -1
LMO3-220ENST00000539232 EXOC6Q8TAG9 804 aa8.83□□□□□ -1
LMO3-220ENST00000539232 TGFBRAP1Q8WUH2 860 aa8.83□□□□□ -1
LMO3-220ENST00000539232 GUCD1Q96NT3 240 aa8.83□□□□□ -1
LMO3-220ENST00000539232 DNAJC2Q99543 621 aaKnown RBP8.83□□□□□ -1
LMO3-220ENST00000539232 DNAJC18Q9H819 358 aa8.83□□□□□ -1
LMO3-220ENST00000539232 SAP30BPQ9UHR5 308 aaKnown RBP8.83□□□□□ -1
LMO3-220ENST00000539232 ARIH1Q9Y4X5 557 aaPredicted RBP8.83□□□□□ -1
LMO3-220ENST00000539232 TCRBV5S4A2TA0A5A2 114 aa8.82□□□□□ -1
LMO3-220ENST00000539232 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
LMO3-220ENST00000539232 PRKAB2O43741 272 aa8.82□□□□□ -1
LMO3-220ENST00000539232 RAB11FIP3O75154 756 aa8.82□□□□□ -1
LMO3-220ENST00000539232 FARP2O94887 1054 aaPredicted RBP8.82□□□□□ -1
LMO3-220ENST00000539232 GJB1P08034 283 aa8.82□□□□□ -1
LMO3-220ENST00000539232 IFIT2P09913 472 aaKnown RBP8.82□□□□□ -1
LMO3-220ENST00000539232 PDE6AP16499 860 aa8.82□□□□□ -1
LMO3-220ENST00000539232 PPP4CP60510 307 aa8.82□□□□□ -1
LMO3-220ENST00000539232 MAP3K10Q02779 954 aa8.82□□□□□ -1
LMO3-220ENST00000539232 HSP90AB4PQ58FF6 505 aa8.82□□□□□ -1
LMO3-220ENST00000539232 ZSCAN29Q8IWY8 852 aaPredicted RBP8.82□□□□□ -1
LMO3-220ENST00000539232 TDHQ8IZJ6 230 aa8.82□□□□□ -1
LMO3-220ENST00000539232 CLASRPQ8N2M8 674 aaKnown RBP8.82□□□□□ -1
LMO3-220ENST00000539232 ZNF341Q9BYN7 854 aa8.82□□□□□ -1
LMO3-220ENST00000539232 OSBPL5Q9H0X9 879 aaPredicted RBP8.82□□□□□ -1
LMO3-220ENST00000539232 PALD1Q9ULE6 856 aa8.82□□□□□ -1
LMO3-220ENST00000539232 MUC3AQ02505 3323 aa8.82□□□□□ -1
LMO3-220ENST00000539232 RPAP1Q9BWH6 1393 aaPredicted RBP8.82□□□□□ -1
LMO3-220ENST00000539232 LAMA2P24043 3122 aaKnown RBP8.82□□□□□ -1
LMO3-220ENST00000539232 CCL15-CCL14A0A0B4J2E2 113 aa8.81□□□□□ -1
LMO3-220ENST00000539232 TESPA1A2RU30 521 aaPredicted RBP8.81□□□□□ -1
LMO3-220ENST00000539232 BTBD19C9JJ37 291 aa8.81□□□□□ -1
LMO3-220ENST00000539232 POTEB2H3BUK9 544 aa8.81□□□□□ -1
LMO3-220ENST00000539232 MAP4K4O95819 1239 aaPredicted RBP8.81□□□□□ -1
LMO3-220ENST00000539232 IGHDP01880 384 aa8.81□□□□□ -1
LMO3-220ENST00000539232 NEFLP07196 543 aa8.81□□□□□ -1
LMO3-220ENST00000539232 CYP2D6P10635 497 aa8.81□□□□□ -1
LMO3-220ENST00000539232 ATP5JP18859 108 aa8.81□□□□□ -1
LMO3-220ENST00000539232 GSTO1P78417 241 aa8.81□□□□□ -1
LMO3-220ENST00000539232 MTFR1Q15390 333 aa8.81□□□□□ -1
LMO3-220ENST00000539232 CCL15Q16663 113 aa8.81□□□□□ -1
LMO3-220ENST00000539232 HAUS7Q99871 368 aa8.81□□□□□ -1
LMO3-220ENST00000539232 RIOK1Q9BRS2 568 aaKnown RBP8.81□□□□□ -1
LMO3-220ENST00000539232 LRRCC1Q9C099 1032 aa8.81□□□□□ -1
LMO3-220ENST00000539232 FLT1P17948 1338 aa8.8□□□□□ -1
LMO3-220ENST00000539232 EYSQ5T1H1 3165 aa8.8□□□□□ -1
LMO3-220ENST00000539232 ECM2O94769 699 aaPredicted RBP8.8□□□□□ -1
LMO3-220ENST00000539232 GNRH1P01148 92 aa8.8□□□□□ -1
LMO3-220ENST00000539232 LDHCP07864 332 aa8.8□□□□□ -1
LMO3-220ENST00000539232 PTPRAP18433 802 aa8.8□□□□□ -1
LMO3-220ENST00000539232 PRMT2P55345 433 aa8.8□□□□□ -1
LMO3-220ENST00000539232 NOL9Q5SY16 702 aaKnown RBP8.8□□□□□ -1
LMO3-220ENST00000539232 SLC9C2Q5TAH2 1124 aa8.8□□□□□ -1
LMO3-220ENST00000539232 GPAT2Q6NUI2 795 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms