RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 AKNAD1Q5T1N1 836 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 KIF6Q6ZMV9 814 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 KIFC2Q96AC6 838 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 GTPBP4Q9BZE4 634 aaKnown RBP8.02□□□□□ -1.13
PROM1-219ENST00000539194 LRRC37AA6NMS7 1700 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 WNT7AO00755 349 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 STARD3NLO95772 234 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 SLFN14P0C7P3 912 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 STK38Q15208 465 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 WASHC4Q2M389 1173 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 FBXO38Q6PIJ6 1188 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 TC2NQ8N9U0 490 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 STRN4Q9NRL3 753 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 GREB1LQ9C091 1923 aaPredicted RBP8.01□□□□□ -1.13
PROM1-219ENST00000539194 TMEM232C9JQI7 657 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 SMIM22K7EJ46 135 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 SYKP43405 635 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 CUL4BQ13620 913 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 PTPN14Q15678 1187 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 EARS2Q5JPH6 523 aaKnown RBP8.01□□□□□ -1.13
PROM1-219ENST00000539194 RAB11FIP4Q86YS3 637 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 LCORLQ8N3X6 602 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 PHF20Q9BVI0 1012 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 CGNQ9P2M7 1197 aaKnown RBP8.01□□□□□ -1.13
PROM1-219ENST00000539194 TBC1D2BQ9UPU7 963 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 PCDHA5Q9Y5H7 936 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 SRPRBQ9Y5M8 271 aaKnown RBP8.01□□□□□ -1.13
PROM1-219ENST00000539194 PARP3Q9Y6F1 533 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 QSER1Q2KHR3 1735 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 PRR29P0C7W0 189 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 MARCKSP29966 332 aaPredicted RBP8.01□□□□□ -1.13
PROM1-219ENST00000539194 NR1I3Q14994 352 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 TPD52L1Q16890 204 aaPredicted RBP8.01□□□□□ -1.13
PROM1-219ENST00000539194 MAN1B1Q9UKM7 699 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 FHOD1Q9Y613 1164 aa8.01□□□□□ -1.13
PROM1-219ENST00000539194 ZNF335Q9H4Z2 1342 aaPredicted RBP8□□□□□ -1.13
PROM1-219ENST00000539194 THSD7AQ9UPZ6 1657 aa8□□□□□ -1.13
PROM1-219ENST00000539194 KIF2AO00139 706 aaPredicted RBP8□□□□□ -1.13
PROM1-219ENST00000539194 ZBTB43O43298 467 aa8□□□□□ -1.13
PROM1-219ENST00000539194 PRKAB2O43741 272 aa8□□□□□ -1.13
PROM1-219ENST00000539194 CDKL5O76039 1030 aa8□□□□□ -1.13
PROM1-219ENST00000539194 RXRAP19793 462 aa8□□□□□ -1.13
PROM1-219ENST00000539194 MYL5Q02045 173 aa8□□□□□ -1.13
PROM1-219ENST00000539194 CTDSPL2Q05D32 466 aa8□□□□□ -1.13
PROM1-219ENST00000539194 DHX8Q14562 1220 aaKnown RBP8□□□□□ -1.13
PROM1-219ENST00000539194 CCDC112Q8NEF3 446 aa8□□□□□ -1.13
PROM1-219ENST00000539194 BTAF1O14981 1849 aa8□□□□□ -1.13
PROM1-219ENST00000539194 PDS5AQ29RF7 1337 aaKnown RBP8□□□□□ -1.13
PROM1-219ENST00000539194 M0R2N6 131 aa8□□□□□ -1.13
PROM1-219ENST00000539194 FGD1P98174 961 aa8□□□□□ -1.13
PROM1-219ENST00000539194 CT47A1Q5JQC4 288 aaPredicted RBP8□□□□□ -1.13
PROM1-219ENST00000539194 CDKAL1Q5VV42 579 aa8□□□□□ -1.13
PROM1-219ENST00000539194 ENOX1Q8TC92 643 aaKnown RBP8□□□□□ -1.13
PROM1-219ENST00000539194 CNNM2Q9H8M5 875 aa8□□□□□ -1.13
PROM1-219ENST00000539194 KCNH3Q9ULD8 1083 aa8□□□□□ -1.13
PROM1-219ENST00000539194 SNAP23O00161 211 aa8□□□□□ -1.13
PROM1-219ENST00000539194 RGL2O15211 777 aa8□□□□□ -1.13
PROM1-219ENST00000539194 CHAF1AQ13111 956 aaPredicted RBP8□□□□□ -1.13
PROM1-219ENST00000539194 E2F4Q16254 413 aa8□□□□□ -1.13
PROM1-219ENST00000539194 CCDC85AQ96PX6 553 aaPredicted RBP8□□□□□ -1.13
PROM1-219ENST00000539194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8□□□□□ -1.13
PROM1-219ENST00000539194 LTBP4Q8N2S1 1624 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 A0A1B0GTH6 734 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 BTBD18B2RXH4 712 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 SLC5A1P13866 664 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 TRIML1Q8N9V2 468 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 OXER1Q8TDS5 423 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 SDF4Q9BRK5 362 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 MYL10Q9BUA6 226 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 FANCLQ9NW38 375 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 PCDHB6Q9Y5E3 794 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 GNAT2P19087 354 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 ETF1P62495 437 aaKnown RBP7.99□□□□□ -1.13
PROM1-219ENST00000539194 CBX1P83916 185 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 FILIP1Q7Z7B0 1213 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 RALYLQ86SE5 291 aaKnown RBP7.99□□□□□ -1.13
PROM1-219ENST00000539194 ZNF397Q8NF99 534 aaPredicted RBP7.99□□□□□ -1.13
PROM1-219ENST00000539194 LRRC10BA6NIK2 292 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 BECN2A8MW95 431 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 ADAMTS3O15072 1205 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 MBD4O95243 580 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 GPTP24298 496 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 MAP3K9P80192 1104 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 TROAPQ12815 778 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 USP49Q70CQ1 688 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 RSRC2Q7L4I2 434 aaKnown RBP7.99□□□□□ -1.13
PROM1-219ENST00000539194 TMC6Q7Z403 805 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 DRC7Q8IY82 874 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 KRI1Q8N9T8 703 aaKnown RBP7.99□□□□□ -1.13
PROM1-219ENST00000539194 MTRQ99707 1265 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 ARMT1Q9H993 441 aa7.99□□□□□ -1.13
PROM1-219ENST00000539194 AATFQ9NY61 560 aaKnown RBP eCLIP7.99□□□□□ -1.13
PROM1-219ENST00000539194 TADA3O75528 432 aa7.98□□□□□ -1.13
PROM1-219ENST00000539194 SLU7O95391 586 aaKnown RBP7.98□□□□□ -1.13
PROM1-219ENST00000539194 CD44P16070 742 aaKnown RBP7.98□□□□□ -1.13
PROM1-219ENST00000539194 IARSP41252 1262 aaKnown RBP7.98□□□□□ -1.13
PROM1-219ENST00000539194 MAGEB6Q8N7X4 407 aa7.98□□□□□ -1.13
PROM1-219ENST00000539194 C4orf32Q8N8J7 132 aa7.98□□□□□ -1.13
PROM1-219ENST00000539194 PKNOX2Q96KN3 472 aa7.98□□□□□ -1.13
PROM1-219ENST00000539194 RNF26Q9BY78 433 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms