RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 MCM5P33992 734 aa29.82■■■□□ 2.36
KLHL42-202ENST00000539176 EVCP57679 992 aa29.82■■■□□ 2.36
KLHL42-202ENST00000539176 GAS2L3Q86XJ1 694 aa29.82■■■□□ 2.36
KLHL42-202ENST00000539176 VPS33BQ9H267 617 aa29.82■■■□□ 2.36
KLHL42-202ENST00000539176 BRPF3Q9ULD4 1205 aa29.82■■■□□ 2.36
KLHL42-202ENST00000539176 HMGN5P82970 282 aaKnown RBP29.81■■■□□ 2.36
KLHL42-202ENST00000539176 SMARCC2Q8TAQ2 1214 aa29.81■■■□□ 2.36
KLHL42-202ENST00000539176 ZNRF3Q9ULT6 936 aa29.81■■■□□ 2.36
KLHL42-202ENST00000539176 APOBRQ0VD83 1088 aa29.8■■■□□ 2.36
KLHL42-202ENST00000539176 PLCG2P16885 1265 aa29.8■■■□□ 2.36
KLHL42-202ENST00000539176 PRELPP51888 382 aa29.8■■■□□ 2.36
KLHL42-202ENST00000539176 HHIPL2Q6UWX4 724 aa29.8■■■□□ 2.36
KLHL42-202ENST00000539176 FOCADQ5VW36 1801 aa29.79■■■□□ 2.36
KLHL42-202ENST00000539176 KDM4AO75164 1064 aa29.79■■■□□ 2.36
KLHL42-202ENST00000539176 UBE2HP62256 183 aa29.79■■■□□ 2.36
KLHL42-202ENST00000539176 SCRN1Q12765 414 aa29.79■■■□□ 2.36
KLHL42-202ENST00000539176 APOBEC3HQ6NTF7 200 aaKnown RBP29.79■■■□□ 2.36
KLHL42-202ENST00000539176 ARPP21Q9UBL0 812 aaPredicted RBP29.79■■■□□ 2.36
KLHL42-202ENST00000539176 CNPY2Q9Y2B0 182 aa29.79■■■□□ 2.36
KLHL42-202ENST00000539176 ZBTB12Q9Y330 459 aaPredicted RBP29.79■■■□□ 2.36
KLHL42-202ENST00000539176 RBM5P52756 815 aaKnown RBP eCLIP29.78■■■□□ 2.36
KLHL42-202ENST00000539176 RSBN1LQ6PCB5 846 aaPredicted RBP29.78■■■□□ 2.36
KLHL42-202ENST00000539176 USP40Q9NVE5 1235 aa29.78■■■□□ 2.36
KLHL42-202ENST00000539176 TMEM63CQ9P1W3 806 aa29.78■■■□□ 2.36
KLHL42-202ENST00000539176 PRDM1O75626 825 aa29.78■■■□□ 2.36
KLHL42-202ENST00000539176 FOXD4L6Q3SYB3 417 aaPredicted RBP29.78■■■□□ 2.36
KLHL42-202ENST00000539176 SBK1Q52WX2 424 aa29.78■■■□□ 2.36
KLHL42-202ENST00000539176 FOXD4L3Q6VB84 417 aaPredicted RBP29.78■■■□□ 2.36
KLHL42-202ENST00000539176 CERS3Q8IU89 383 aa29.78■■■□□ 2.36
KLHL42-202ENST00000539176 ZSWIM5Q9P217 1185 aa29.78■■■□□ 2.36
KLHL42-202ENST00000539176 FLT1P17948 1338 aa29.77■■■□□ 2.36
KLHL42-202ENST00000539176 MYH1P12882 1939 aa29.77■■■□□ 2.36
KLHL42-202ENST00000539176 VIL1P09327 827 aaKnown RBP29.77■■■□□ 2.36
KLHL42-202ENST00000539176 CDC42EP5Q6NZY7 148 aa29.77■■■□□ 2.36
KLHL42-202ENST00000539176 CDC37L1Q7L3B6 337 aa29.77■■■□□ 2.36
KLHL42-202ENST00000539176 CNNM2Q9H8M5 875 aa29.77■■■□□ 2.36
KLHL42-202ENST00000539176 DDX60LQ5H9U9 1706 aaKnown RBP29.77■■■□□ 2.36
KLHL42-202ENST00000539176 PICALMQ13492 652 aa29.76■■■□□ 2.36
KLHL42-202ENST00000539176 ZDHHC15Q96MV8 337 aa29.76■■■□□ 2.36
KLHL42-202ENST00000539176 KRT23Q9C075 422 aa29.76■■■□□ 2.36
KLHL42-202ENST00000539176 RNF41Q9H4P4 317 aaPredicted RBP29.76■■■□□ 2.36
KLHL42-202ENST00000539176 GDPD2Q9HCC8 539 aa29.76■■■□□ 2.36
KLHL42-202ENST00000539176 ECM29Q5VYK3 1845 aa29.76■■■□□ 2.36
KLHL42-202ENST00000539176 CXCL9Q07325 125 aa29.76■■■□□ 2.35
KLHL42-202ENST00000539176 C12orf60Q5U649 245 aa29.76■■■□□ 2.35
KLHL42-202ENST00000539176 KRT85P78386 507 aa29.75■■■□□ 2.35
KLHL42-202ENST00000539176 FAM184AQ8NB25 1140 aa29.75■■■□□ 2.35
KLHL42-202ENST00000539176 NSUN7Q8NE18 718 aaKnown RBP29.75■■■□□ 2.35
KLHL42-202ENST00000539176 JDP2Q8WYK2 163 aa29.75■■■□□ 2.35
KLHL42-202ENST00000539176 DYNLL2Q96FJ2 89 aa29.75■■■□□ 2.35
KLHL42-202ENST00000539176 DDX4Q9NQI0 724 aaKnown RBP29.75■■■□□ 2.35
KLHL42-202ENST00000539176 NAP1L2Q9ULW6 460 aaPredicted RBP29.75■■■□□ 2.35
KLHL42-202ENST00000539176 WDHD1O75717 1129 aaPredicted RBP29.74■■■□□ 2.35
KLHL42-202ENST00000539176 ZKSCAN3Q9BRR0 538 aa29.74■■■□□ 2.35
KLHL42-202ENST00000539176 SENP2Q9HC62 589 aa29.74■■■□□ 2.35
KLHL42-202ENST00000539176 RBM27Q9P2N5 1060 aaKnown RBP29.74■■■□□ 2.35
KLHL42-202ENST00000539176 LTBP3Q9NS15 1303 aa29.74■■■□□ 2.35
KLHL42-202ENST00000539176 TCHHQ07283 1943 aa29.74■■■□□ 2.35
KLHL42-202ENST00000539176 JAK2O60674 1132 aa29.74■■■□□ 2.35
KLHL42-202ENST00000539176 PDIA3P30101 505 aaKnown RBP29.74■■■□□ 2.35
KLHL42-202ENST00000539176 PLCD1P51178 756 aa29.74■■■□□ 2.35
KLHL42-202ENST00000539176 DNM1Q05193 864 aaKnown RBP29.74■■■□□ 2.35
KLHL42-202ENST00000539176 GMLQ99445 158 aa29.74■■■□□ 2.35
KLHL42-202ENST00000539176 ELP1O95163 1332 aa29.73■■■□□ 2.35
KLHL42-202ENST00000539176 POLR3DP05423 398 aaPredicted RBP29.73■■■□□ 2.35
KLHL42-202ENST00000539176 CACNB3P54284 484 aa29.73■■■□□ 2.35
KLHL42-202ENST00000539176 HDLBPQ00341 1268 aaKnown RBP29.73■■■□□ 2.35
KLHL42-202ENST00000539176 LRSAM1Q6UWE0 723 aa29.73■■■□□ 2.35
KLHL42-202ENST00000539176 MRIQ9BWK5 157 aa29.73■■■□□ 2.35
KLHL42-202ENST00000539176 SERPINA10Q9UK55 444 aa29.73■■■□□ 2.35
KLHL42-202ENST00000539176 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.73■■■□□ 2.35
KLHL42-202ENST00000539176 FIBPO43427 364 aa29.72■■■□□ 2.35
KLHL42-202ENST00000539176 CFAP100Q494V2 611 aa29.72■■■□□ 2.35
KLHL42-202ENST00000539176 SYT17Q9BSW7 474 aa29.72■■■□□ 2.35
KLHL42-202ENST00000539176 SH2B2O14492 632 aaPredicted RBP29.72■■■□□ 2.35
KLHL42-202ENST00000539176 DHX16O60231 1041 aaKnown RBP29.72■■■□□ 2.35
KLHL42-202ENST00000539176 GADD45BO75293 160 aaPredicted RBP29.72■■■□□ 2.35
KLHL42-202ENST00000539176 RAB11FIP4Q86YS3 637 aa29.72■■■□□ 2.35
KLHL42-202ENST00000539176 ZSCAN16Q9H4T2 348 aaPredicted RBP29.72■■■□□ 2.35
KLHL42-202ENST00000539176 NFIAQ12857 509 aa29.71■■■□□ 2.35
KLHL42-202ENST00000539176 IGDCC4Q8TDY8 1250 aa29.71■■■□□ 2.35
KLHL42-202ENST00000539176 MYO3BQ8WXR4 1341 aa29.71■■■□□ 2.35
KLHL42-202ENST00000539176 PTPDC1A2A3K4 754 aa29.7■■■□□ 2.35
KLHL42-202ENST00000539176 H3BQV1 296 aa29.7■■■□□ 2.35
KLHL42-202ENST00000539176 RANBP6O60518 1105 aaKnown RBP29.7■■■□□ 2.35
KLHL42-202ENST00000539176 FGRP09769 529 aa29.7■■■□□ 2.35
KLHL42-202ENST00000539176 IFFO2Q5TF58 517 aa29.7■■■□□ 2.35
KLHL42-202ENST00000539176 CIAPIN1Q6FI81 312 aa29.7■■■□□ 2.35
KLHL42-202ENST00000539176 ARHGAP27Q6ZUM4 889 aa29.7■■■□□ 2.35
KLHL42-202ENST00000539176 SLC44A5Q8NCS7 719 aa29.7■■■□□ 2.35
KLHL42-202ENST00000539176 PANK2Q9BZ23 570 aa29.7■■■□□ 2.35
KLHL42-202ENST00000539176 SCAND2PQ9GZW5 306 aaPredicted RBP29.7■■■□□ 2.35
KLHL42-202ENST00000539176 KLF18A0A0U1RQI7 1052 aa29.7■■■□□ 2.34
KLHL42-202ENST00000539176 IFIT3O14879 490 aaKnown RBP29.7■■■□□ 2.34
KLHL42-202ENST00000539176 TMEM67Q5HYA8 995 aa29.7■■■□□ 2.34
KLHL42-202ENST00000539176 ESR2Q92731 530 aa29.7■■■□□ 2.34
KLHL42-202ENST00000539176 ANGEL1Q9UNK9 670 aaKnown RBP29.7■■■□□ 2.34
KLHL42-202ENST00000539176 SLC3A2P08195 630 aaKnown RBP29.69■■■□□ 2.34
KLHL42-202ENST00000539176 CCT2P78371 535 aaKnown RBP29.69■■■□□ 2.34
KLHL42-202ENST00000539176 AMOTL1Q8IY63 956 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms